RNA–Protein interactions for RNA: ENST00000398734.8

UBE2D2-203, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

TSL 5

Gene UBE2D2, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-203ENST00000398734 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
UBE2D2-203ENST00000398734 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
UBE2D2-203ENST00000398734 SENP3Q9H4L4 574 aaPredicted RBP24.69■■□□□ 1.54
UBE2D2-203ENST00000398734 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
UBE2D2-203ENST00000398734 FOXD1Q16676 465 aa23.02■■□□□ 1.28
UBE2D2-203ENST00000398734 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
UBE2D2-203ENST00000398734 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
UBE2D2-203ENST00000398734 MSH5O43196 834 aa21.5■■□□□ 1.03
UBE2D2-203ENST00000398734 ADRA2BP18089 450 aa21.48■■□□□ 1.03
UBE2D2-203ENST00000398734 PIAS4Q8N2W9 510 aaPredicted RBP21.47■■□□□ 1.03
UBE2D2-203ENST00000398734 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
UBE2D2-203ENST00000398734 MAPK8IP2Q13387 824 aaPredicted RBP19.72■□□□□ 0.75
UBE2D2-203ENST00000398734 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
UBE2D2-203ENST00000398734 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
UBE2D2-203ENST00000398734 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
UBE2D2-203ENST00000398734 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
UBE2D2-203ENST00000398734 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
UBE2D2-203ENST00000398734 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
UBE2D2-203ENST00000398734 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
UBE2D2-203ENST00000398734 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
UBE2D2-203ENST00000398734 ABCC9O60706 1549 aa18.66■□□□□ 0.58
UBE2D2-203ENST00000398734 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
UBE2D2-203ENST00000398734 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
UBE2D2-203ENST00000398734 CACNB1Q02641 598 aaPredicted RBP18.38■□□□□ 0.53
UBE2D2-203ENST00000398734 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
UBE2D2-203ENST00000398734 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
UBE2D2-203ENST00000398734 C1QBPQ07021 282 aaKnown RBP18.11■□□□□ 0.49
UBE2D2-203ENST00000398734 KCNA4P22459 653 aa18.02■□□□□ 0.48
UBE2D2-203ENST00000398734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.463e-7■■□□□ 12.8
UBE2D2-203ENST00000398734 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
UBE2D2-203ENST00000398734 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
UBE2D2-203ENST00000398734 SLC4A2P04920 1241 aa17.52■□□□□ 0.4
UBE2D2-203ENST00000398734 DNAJC5Q9H3Z4 198 aa17.48■□□□□ 0.39
UBE2D2-203ENST00000398734 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
UBE2D2-203ENST00000398734 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBE2D2-203ENST00000398734 CAPN15O75808 1086 aa17.26■□□□□ 0.35
UBE2D2-203ENST00000398734 DSG3P32926 999 aa17.21■□□□□ 0.35
UBE2D2-203ENST00000398734 RB1CC1Q8TDY2 1594 aa17.18■□□□□ 0.34
UBE2D2-203ENST00000398734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
UBE2D2-203ENST00000398734 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
UBE2D2-203ENST00000398734 APLP2Q06481 763 aa17.12■□□□□ 0.33
UBE2D2-203ENST00000398734 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
UBE2D2-203ENST00000398734 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
UBE2D2-203ENST00000398734 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
UBE2D2-203ENST00000398734 TRHP20396 242 aaPredicted RBP17■□□□□ 0.31
UBE2D2-203ENST00000398734 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
UBE2D2-203ENST00000398734 ABCB7O75027 752 aa16.88■□□□□ 0.29
UBE2D2-203ENST00000398734 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
UBE2D2-203ENST00000398734 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
UBE2D2-203ENST00000398734 NACADO15069 1562 aa16.85■□□□□ 0.29
UBE2D2-203ENST00000398734 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
UBE2D2-203ENST00000398734 UNC13AQ9UPW8 1703 aa16.77■□□□□ 0.28
UBE2D2-203ENST00000398734 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
UBE2D2-203ENST00000398734 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
UBE2D2-203ENST00000398734 POLA2Q14181 598 aa16.6■□□□□ 0.25
UBE2D2-203ENST00000398734 ZBTB22O15209 634 aa16.59■□□□□ 0.25
UBE2D2-203ENST00000398734 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
UBE2D2-203ENST00000398734 EIF4G1Q04637 1599 aaKnown RBP16.46■□□□□ 0.23
UBE2D2-203ENST00000398734 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
UBE2D2-203ENST00000398734 POTEHQ6S545 545 aa16.37■□□□□ 0.21
UBE2D2-203ENST00000398734 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
UBE2D2-203ENST00000398734 SHROOM4Q9ULL8 1493 aa16.33■□□□□ 0.2
UBE2D2-203ENST00000398734 CUX2O14529 1486 aa16.32■□□□□ 0.2
UBE2D2-203ENST00000398734 ATXN8OSP0DMR3 200 aa16.32■□□□□ 0.2
UBE2D2-203ENST00000398734 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
UBE2D2-203ENST00000398734 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
UBE2D2-203ENST00000398734 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
UBE2D2-203ENST00000398734 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
UBE2D2-203ENST00000398734 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
UBE2D2-203ENST00000398734 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
UBE2D2-203ENST00000398734 CHRDL2Q6WN34 429 aa16.02■□□□□ 0.16
UBE2D2-203ENST00000398734 REM2Q8IYK8 340 aaPredicted RBP15.91■□□□□ 0.14
UBE2D2-203ENST00000398734 FBLN2P98095 1184 aa15.88■□□□□ 0.13
UBE2D2-203ENST00000398734 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
UBE2D2-203ENST00000398734 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
UBE2D2-203ENST00000398734 NESP48681 1621 aa15.81■□□□□ 0.12
UBE2D2-203ENST00000398734 SPDYE2BA6NHP3 402 aa15.79■□□□□ 0.12
UBE2D2-203ENST00000398734 SPDYE6P0CI01 402 aa15.79■□□□□ 0.12
UBE2D2-203ENST00000398734 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
UBE2D2-203ENST00000398734 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
UBE2D2-203ENST00000398734 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
UBE2D2-203ENST00000398734 PITPNM1O00562 1244 aa15.73■□□□□ 0.11
UBE2D2-203ENST00000398734 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
UBE2D2-203ENST00000398734 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
UBE2D2-203ENST00000398734 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
UBE2D2-203ENST00000398734 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
UBE2D2-203ENST00000398734 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
UBE2D2-203ENST00000398734 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
UBE2D2-203ENST00000398734 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
UBE2D2-203ENST00000398734 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
UBE2D2-203ENST00000398734 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
UBE2D2-203ENST00000398734 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
UBE2D2-203ENST00000398734 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
UBE2D2-203ENST00000398734 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
UBE2D2-203ENST00000398734 CLEC11AQ9Y240 323 aa15.39■□□□□ 0.05
UBE2D2-203ENST00000398734 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
UBE2D2-203ENST00000398734 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
UBE2D2-203ENST00000398734 RIMBP3CA6NJZ7 1639 aa15.36■□□□□ 0.05
UBE2D2-203ENST00000398734 RIMBP3BA6NNM3 1639 aa15.36■□□□□ 0.05
UBE2D2-203ENST00000398734 RIMBP3Q9UFD9 1639 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms