Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
CCDC160A6NGH7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC160A6NGH7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC160A6NGH7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC160A6NGH7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC160A6NGH7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC160A6NGH7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC160A6NGH7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCDC160A6NGH7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC160A6NGH7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC160A6NGH7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC160A6NGH7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC160A6NGH7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC160A6NGH7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC160A6NGH7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC160A6NGH7 MIR3665-201ENST00000578708 105 ntBASIC19.78■□□□□ 0.76
CCDC160A6NGH7 MIR3960-201ENST00000583311 91 ntBASIC19.78■□□□□ 0.76
CCDC160A6NGH7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC160A6NGH7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC160A6NGH7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC160A6NGH7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC160A6NGH7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 AC021231.2-201ENST00000594613 730 ntBASIC19.77■□□□□ 0.76
CCDC160A6NGH7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC160A6NGH7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC160A6NGH7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.77■□□□□ 0.75
CCDC160A6NGH7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 HLA-V-202ENST00000446817 847 ntBASIC19.76■□□□□ 0.75
CCDC160A6NGH7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC160A6NGH7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms