RNA–Protein interactions for RNA: ENST00000374557.4

EPB41L4B-201, Transcript of erythrocyte membrane protein band 4.1 like 4B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L4B, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L4B-201ENST00000374557 NISCHQ9Y2I1 1504 aa35.82■■■■□ 3.32
EPB41L4B-201ENST00000374557 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
EPB41L4B-201ENST00000374557 SHROOM4Q9ULL8 1493 aa33.11■■■□□ 2.89
EPB41L4B-201ENST00000374557 SUPT5HO00267 1087 aaKnown RBP32.93■■■□□ 2.86
EPB41L4B-201ENST00000374557 EHMT2Q96KQ7 1210 aa31.32■■■□□ 2.6
EPB41L4B-201ENST00000374557 PCGF6Q9BYE7 350 aa30.93■■■□□ 2.54
EPB41L4B-201ENST00000374557 FAM9AQ8IZU1 332 aaPredicted RBP30.82■■■□□ 2.53
EPB41L4B-201ENST00000374557 CHIC1Q5VXU3 224 aa30.64■■■□□ 2.5
EPB41L4B-201ENST00000374557 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
EPB41L4B-201ENST00000374557 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
EPB41L4B-201ENST00000374557 TTBK1Q5TCY1 1321 aaPredicted RBP30.18■■■□□ 2.42
EPB41L4B-201ENST00000374557 PPARGC1BQ86YN6 1023 aaKnown RBP30.05■■■□□ 2.4
EPB41L4B-201ENST00000374557 ZCCHC6Q5VYS8 1495 aaKnown RBP29.96■■■□□ 2.39
EPB41L4B-201ENST00000374557 HRCP23327 699 aa29.92■■■□□ 2.38
EPB41L4B-201ENST00000374557 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
EPB41L4B-201ENST00000374557 ABCC9O60706 1549 aa29.61■■■□□ 2.33
EPB41L4B-201ENST00000374557 RANGAP1P46060 587 aaPredicted RBP29.6■■■□□ 2.33
EPB41L4B-201ENST00000374557 TRIM26Q12899 539 aaPredicted RBP29.54■■■□□ 2.32
EPB41L4B-201ENST00000374557 CCDC180Q9P1Z9 1646 aa29.36■■■□□ 2.29
EPB41L4B-201ENST00000374557 UBTFP17480 764 aaKnown RBP29.3■■■□□ 2.28
EPB41L4B-201ENST00000374557 CCER1Q8TC90 406 aaPredicted RBP29.29■■■□□ 2.28
EPB41L4B-201ENST00000374557 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
EPB41L4B-201ENST00000374557 PABPN1Q86U42 306 aaKnown RBP eCLIP29.14■■■□□ 2.26
EPB41L4B-201ENST00000374557 ZEB1P37275 1124 aaPredicted RBP29.03■■■□□ 2.24
EPB41L4B-201ENST00000374557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.02■■■□□ 2.24
EPB41L4B-201ENST00000374557 APLP2Q06481 763 aa29.01■■■□□ 2.24
EPB41L4B-201ENST00000374557 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
EPB41L4B-201ENST00000374557 HNRNPUL2Q1KMD3 747 aaKnown RBP28.69■■■□□ 2.18
EPB41L4B-201ENST00000374557 YTHDC1Q96MU7 727 aaKnown RBP28.62■■■□□ 2.17
EPB41L4B-201ENST00000374557 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
EPB41L4B-201ENST00000374557 ATP1B4Q9UN42 357 aaPredicted RBP28.53■■■□□ 2.16
EPB41L4B-201ENST00000374557 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
EPB41L4B-201ENST00000374557 ITGAEP38570 1179 aa28.41■■■□□ 2.14
EPB41L4B-201ENST00000374557 CSRNP3Q8WYN3 585 aa28.28■■■□□ 2.12
EPB41L4B-201ENST00000374557 CENPBP07199 599 aaPredicted RBP28.27■■■□□ 2.12
EPB41L4B-201ENST00000374557 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
EPB41L4B-201ENST00000374557 DIEXFQ68CQ4 756 aaKnown RBP28.22■■■□□ 2.11
EPB41L4B-201ENST00000374557 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
EPB41L4B-201ENST00000374557 NACADO15069 1562 aa27.91■■■□□ 2.06
EPB41L4B-201ENST00000374557 WIZO95785 1651 aa27.81■■■□□ 2.04
EPB41L4B-201ENST00000374557 GTF3C3Q9Y5Q9 886 aa27.8■■■□□ 2.04
EPB41L4B-201ENST00000374557 SOGA1O94964 1423 aa27.78■■■□□ 2.04
EPB41L4B-201ENST00000374557 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
EPB41L4B-201ENST00000374557 P3H3Q8IVL6 736 aa27.76■■■□□ 2.03
EPB41L4B-201ENST00000374557 CEP162Q5TB80 1403 aa27.72■■■□□ 2.03
EPB41L4B-201ENST00000374557 ZNF316A6NFI3 1004 aaPredicted RBP27.7■■■□□ 2.02
EPB41L4B-201ENST00000374557 SCAF1Q9H7N4 1312 aaKnown RBP27.69■■■□□ 2.02
EPB41L4B-201ENST00000374557 CCDC88BA6NC98 1476 aa27.69■■■□□ 2.02
EPB41L4B-201ENST00000374557 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
EPB41L4B-201ENST00000374557 FAM50AQ14320 339 aaKnown RBP27.64■■■□□ 2.01
EPB41L4B-201ENST00000374557 BAZ1AQ9NRL2 1556 aaPredicted RBP27.62■■■□□ 2.01
EPB41L4B-201ENST00000374557 ACIN1Q9UKV3 1341 aaKnown RBP27.61■■■□□ 2.01
EPB41L4B-201ENST00000374557 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
EPB41L4B-201ENST00000374557 CLIP1P30622 1438 aa27.46■■□□□ 1.99
EPB41L4B-201ENST00000374557 PELP1Q8IZL8 1130 aaKnown RBP27.45■■□□□ 1.98
EPB41L4B-201ENST00000374557 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
EPB41L4B-201ENST00000374557 TNIKQ9UKE5 1360 aa27.41■■□□□ 1.98
EPB41L4B-201ENST00000374557 CNGB1Q14028 1251 aaPredicted RBP27.39■■□□□ 1.97
EPB41L4B-201ENST00000374557 MIER1Q8N108 512 aa27.38■■□□□ 1.97
EPB41L4B-201ENST00000374557 ARID3CA6NKF2 412 aa27.36■■□□□ 1.97
EPB41L4B-201ENST00000374557 GOLGA3Q08378 1498 aa27.33■■□□□ 1.97
EPB41L4B-201ENST00000374557 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
EPB41L4B-201ENST00000374557 EEA1Q15075 1411 aa27.18■■□□□ 1.94
EPB41L4B-201ENST00000374557 BCANQ96GW7 911 aa27.16■■□□□ 1.94
EPB41L4B-201ENST00000374557 HIRIP3Q9BW71 556 aaPredicted RBP27.16■■□□□ 1.94
EPB41L4B-201ENST00000374557 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
EPB41L4B-201ENST00000374557 POLR3GLQ9BT43 218 aa27.13■■□□□ 1.93
EPB41L4B-201ENST00000374557 KANK4Q5T7N3 995 aaPredicted RBP27.09■■□□□ 1.93
EPB41L4B-201ENST00000374557 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
EPB41L4B-201ENST00000374557 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
EPB41L4B-201ENST00000374557 TRIM52Q96A61 297 aa27.04■■□□□ 1.92
EPB41L4B-201ENST00000374557 NEFLP07196 543 aa27.03■■□□□ 1.92
EPB41L4B-201ENST00000374557 DDX10Q13206 875 aaKnown RBP26.99■■□□□ 1.91
EPB41L4B-201ENST00000374557 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
EPB41L4B-201ENST00000374557 RAPGEF2Q9Y4G8 1499 aa26.92■■□□□ 1.9
EPB41L4B-201ENST00000374557 CHIC2Q9UKJ5 165 aa26.87■■□□□ 1.89
EPB41L4B-201ENST00000374557 FBLN2P98095 1184 aa26.87■■□□□ 1.89
EPB41L4B-201ENST00000374557 VPS8Q8N3P4 1428 aa26.85■■□□□ 1.89
EPB41L4B-201ENST00000374557 SIN3AQ96ST3 1273 aa26.84■■□□□ 1.89
EPB41L4B-201ENST00000374557 ATAD2BQ9ULI0 1458 aa26.84■■□□□ 1.89
EPB41L4B-201ENST00000374557 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
EPB41L4B-201ENST00000374557 ZNF326Q5BKZ1 582 aaKnown RBP26.77■■□□□ 1.88
EPB41L4B-201ENST00000374557 ANP32CO43423 234 aa26.72■■□□□ 1.87
EPB41L4B-201ENST00000374557 CUX2O14529 1486 aa26.68■■□□□ 1.86
EPB41L4B-201ENST00000374557 RRP7BPQ9NSQ0 103 aa26.63■■□□□ 1.85
EPB41L4B-201ENST00000374557 ZNF777Q9ULD5 760 aaPredicted RBP26.63■■□□□ 1.85
EPB41L4B-201ENST00000374557 CCNB3Q8WWL7 1395 aa26.6■■□□□ 1.85
EPB41L4B-201ENST00000374557 CARMIL1Q5VZK9 1371 aa26.59■■□□□ 1.85
EPB41L4B-201ENST00000374557 FKBP8Q14318 412 aa26.58■■□□□ 1.85
EPB41L4B-201ENST00000374557 MTUS2Q5JR59 1369 aa26.57■■□□□ 1.84
EPB41L4B-201ENST00000374557 TONSLQ96HA7 1378 aa26.57■■□□□ 1.84
EPB41L4B-201ENST00000374557 SYNJ1O43426 1573 aa26.54■■□□□ 1.84
EPB41L4B-201ENST00000374557 ERICH6Q7L0X2 663 aa26.51■■□□□ 1.83
EPB41L4B-201ENST00000374557 SENP3-EIF4A1A0A087X0R7 540 aa26.47■■□□□ 1.83
EPB41L4B-201ENST00000374557 KCNH8Q96L42 1107 aa26.47■■□□□ 1.83
EPB41L4B-201ENST00000374557 IRX6P78412 446 aaPredicted RBP26.41■■□□□ 1.82
EPB41L4B-201ENST00000374557 HNRNPUQ00839 825 aaKnown RBP eCLIP26.4■■□□□ 1.82
EPB41L4B-201ENST00000374557 MYT1LQ9UL68 1186 aa26.4■■□□□ 1.82
EPB41L4B-201ENST00000374557 RAB3GAP2Q9H2M9 1393 aa26.4■■□□□ 1.82
EPB41L4B-201ENST00000374557 DHX57Q6P158 1386 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms