RNA–Protein interactions for RNA: ENST00000383832.7

CPNE9-203, Transcript of copine family member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPNE9, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-203ENST00000383832 NISCHQ9Y2I1 1504 aa46.58■■■■■ 5.05
CPNE9-203ENST00000383832 CCDC180Q9P1Z9 1646 aa40.33■■■■■ 4.05
CPNE9-203ENST00000383832 ZCCHC6Q5VYS8 1495 aaKnown RBP39.19■■■■□ 3.86
CPNE9-203ENST00000383832 DCAF8L2P0C7V8 631 aa38.5■■■■□ 3.75
CPNE9-203ENST00000383832 SHROOM4Q9ULL8 1493 aa38.45■■■■□ 3.75
CPNE9-203ENST00000383832 DCAF1Q9Y4B6 1507 aa38.42■■■■□ 3.74
CPNE9-203ENST00000383832 ABCC9O60706 1549 aa37.93■■■■□ 3.66
CPNE9-203ENST00000383832 MYO15BQ96JP2 1530 aa37.78■■■■□ 3.64
CPNE9-203ENST00000383832 NACADO15069 1562 aa37.49■■■■□ 3.59
CPNE9-203ENST00000383832 SCRIBQ14160 1630 aa37.29■■■■□ 3.56
CPNE9-203ENST00000383832 SUPT5HO00267 1087 aaKnown RBP37.19■■■■□ 3.54
CPNE9-203ENST00000383832 RB1CC1Q8TDY2 1594 aa37.08■■■■□ 3.53
CPNE9-203ENST00000383832 UNC13AQ9UPW8 1703 aa36.48■■■■□ 3.43
CPNE9-203ENST00000383832 RSF1Q96T23 1441 aaPredicted RBP36.33■■■■□ 3.41
CPNE9-203ENST00000383832 CECR2Q9BXF3 1484 aa36.25■■■■□ 3.39
CPNE9-203ENST00000383832 MROH2BQ7Z745 1585 aa36.06■■■■□ 3.36
CPNE9-203ENST00000383832 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
CPNE9-203ENST00000383832 PABPN1Q86U42 306 aaKnown RBP eCLIP35.92■■■■□ 3.34
CPNE9-203ENST00000383832 BAZ1AQ9NRL2 1556 aaPredicted RBP35.9■■■■□ 3.34
CPNE9-203ENST00000383832 WIZO95785 1651 aa35.81■■■■□ 3.32
CPNE9-203ENST00000383832 CHIC1Q5VXU3 224 aa35.78■■■■□ 3.32
CPNE9-203ENST00000383832 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
CPNE9-203ENST00000383832 TOP2AP11388 1531 aaKnown RBP35.34■■■■□ 3.25
CPNE9-203ENST00000383832 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
CPNE9-203ENST00000383832 SMARCA2P51531 1590 aa35.07■■■■□ 3.21
CPNE9-203ENST00000383832 CCDC88BA6NC98 1476 aa35.06■■■■□ 3.2
CPNE9-203ENST00000383832 ATAD2BQ9ULI0 1458 aa35.03■■■■□ 3.2
CPNE9-203ENST00000383832 EIF4G1Q04637 1599 aaKnown RBP34.94■■■■□ 3.18
CPNE9-203ENST00000383832 TRIM41Q8WV44 630 aa34.87■■■■□ 3.17
CPNE9-203ENST00000383832 BAZ1BQ9UIG0 1483 aaKnown RBP34.85■■■■□ 3.17
CPNE9-203ENST00000383832 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
CPNE9-203ENST00000383832 HMGXB3Q12766 1538 aa34.59■■■■□ 3.13
CPNE9-203ENST00000383832 LOC105371045A0A1W2PR82 267 aa34.51■■■■□ 3.12
CPNE9-203ENST00000383832 ABCC8Q09428 1581 aa34.51■■■■□ 3.12
CPNE9-203ENST00000383832 FAM9AQ8IZU1 332 aaPredicted RBP34.34■■■■□ 3.09
CPNE9-203ENST00000383832 CC2D2AQ9P2K1 1620 aa34.31■■■■□ 3.08
CPNE9-203ENST00000383832 WRNQ14191 1432 aaPredicted RBP eCLIP34.16■■■■□ 3.06
CPNE9-203ENST00000383832 SYNJ1O43426 1573 aa34.04■■■■□ 3.04
CPNE9-203ENST00000383832 CFTRP13569 1480 aa34■■■■□ 3.03
CPNE9-203ENST00000383832 SOGA1O94964 1423 aa33.95■■■■□ 3.03
CPNE9-203ENST00000383832 EHMT2Q96KQ7 1210 aa33.92■■■■□ 3.02
CPNE9-203ENST00000383832 PRDM2Q13029 1718 aa33.83■■■■□ 3.01
CPNE9-203ENST00000383832 TOP2BQ02880 1626 aa33.83■■■■□ 3.01
CPNE9-203ENST00000383832 RUSC2Q8N2Y8 1516 aa33.82■■■■□ 3.01
CPNE9-203ENST00000383832 EEA1Q15075 1411 aa33.8■■■■□ 3
CPNE9-203ENST00000383832 CADPSQ9ULU8 1353 aa33.8■■■■□ 3
CPNE9-203ENST00000383832 BIVM-ERCC5R4GMW8 1640 aa33.76■■■■□ 3
CPNE9-203ENST00000383832 CSRNP3Q8WYN3 585 aa33.7■■■□□ 2.98
CPNE9-203ENST00000383832 CUX1P39880 1505 aa33.67■■■□□ 2.98
CPNE9-203ENST00000383832 DNAJC5BQ9UF47 199 aa33.49■■■□□ 2.95
CPNE9-203ENST00000383832 NESP48681 1621 aa33.47■■■□□ 2.95
CPNE9-203ENST00000383832 FANCD2Q9BXW9 1451 aa33.44■■■□□ 2.94
CPNE9-203ENST00000383832 GOLGA3Q08378 1498 aa33.41■■■□□ 2.94
CPNE9-203ENST00000383832 TNIKQ9UKE5 1360 aa33.41■■■□□ 2.94
CPNE9-203ENST00000383832 KIF21BO75037 1637 aa33.4■■■□□ 2.94
CPNE9-203ENST00000383832 CEP164Q9UPV0 1460 aa33.37■■■□□ 2.93
CPNE9-203ENST00000383832 LAMC3Q9Y6N6 1575 aa33.37■■■□□ 2.93
CPNE9-203ENST00000383832 UBTFP17480 764 aaKnown RBP33.34■■■□□ 2.93
CPNE9-203ENST00000383832 PCGF6Q9BYE7 350 aa33.34■■■□□ 2.93
CPNE9-203ENST00000383832 CEP162Q5TB80 1403 aa33.29■■■□□ 2.92
CPNE9-203ENST00000383832 KIF27Q86VH2 1401 aa33.23■■■□□ 2.91
CPNE9-203ENST00000383832 FGD5Q6ZNL6 1462 aa33.22■■■□□ 2.91
CPNE9-203ENST00000383832 RAPGEF2Q9Y4G8 1499 aa33.21■■■□□ 2.91
CPNE9-203ENST00000383832 DNMBPQ6XZF7 1577 aa33.18■■■□□ 2.9
CPNE9-203ENST00000383832 TRIM26Q12899 539 aaPredicted RBP33.14■■■□□ 2.9
CPNE9-203ENST00000383832 PRXQ9BXM0 1461 aa33.14■■■□□ 2.9
CPNE9-203ENST00000383832 TOPBP1Q92547 1522 aa33.13■■■□□ 2.89
CPNE9-203ENST00000383832 PDS5BQ9NTI5 1447 aa33.11■■■□□ 2.89
CPNE9-203ENST00000383832 CUX2O14529 1486 aa33.1■■■□□ 2.89
CPNE9-203ENST00000383832 ERICH3Q5RHP9 1530 aa33.08■■■□□ 2.89
CPNE9-203ENST00000383832 KIF21AQ7Z4S6 1674 aa33.03■■■□□ 2.88
CPNE9-203ENST00000383832 URB2Q14146 1524 aaKnown RBP33.02■■■□□ 2.88
CPNE9-203ENST00000383832 POLA1P09884 1462 aaPredicted RBP33.01■■■□□ 2.87
CPNE9-203ENST00000383832 RAD54L2Q9Y4B4 1467 aa32.96■■■□□ 2.87
CPNE9-203ENST00000383832 IGF1RP08069 1367 aa32.96■■■□□ 2.87
CPNE9-203ENST00000383832 CLIP1P30622 1438 aa32.93■■■□□ 2.86
CPNE9-203ENST00000383832 PPARGC1BQ86YN6 1023 aaKnown RBP32.9■■■□□ 2.86
CPNE9-203ENST00000383832 ABCA10Q8WWZ4 1543 aa32.9■■■□□ 2.86
CPNE9-203ENST00000383832 HRCP23327 699 aa32.81■■■□□ 2.84
CPNE9-203ENST00000383832 CARMIL1Q5VZK9 1371 aa32.78■■■□□ 2.84
CPNE9-203ENST00000383832 RANGAP1P46060 587 aaPredicted RBP32.78■■■□□ 2.84
CPNE9-203ENST00000383832 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
CPNE9-203ENST00000383832 VPS8Q8N3P4 1428 aa32.68■■■□□ 2.82
CPNE9-203ENST00000383832 MRC2Q9UBG0 1479 aa32.66■■■□□ 2.82
CPNE9-203ENST00000383832 ABCA5Q8WWZ7 1642 aa32.61■■■□□ 2.81
CPNE9-203ENST00000383832 TDRD9Q8NDG6 1382 aaKnown RBP32.61■■■□□ 2.81
CPNE9-203ENST00000383832 TARBP1Q13395 1621 aaKnown RBP32.61■■■□□ 2.81
CPNE9-203ENST00000383832 CUL7Q14999 1698 aa32.58■■■□□ 2.81
CPNE9-203ENST00000383832 ARAP1Q96P48 1450 aa32.57■■■□□ 2.8
CPNE9-203ENST00000383832 TTBK1Q5TCY1 1321 aaPredicted RBP32.54■■■□□ 2.8
CPNE9-203ENST00000383832 GAPVD1Q14C86 1478 aa32.54■■■□□ 2.8
CPNE9-203ENST00000383832 ARHGAP35Q9NRY4 1499 aa32.49■■■□□ 2.79
CPNE9-203ENST00000383832 WDR62O43379 1518 aa32.48■■■□□ 2.79
CPNE9-203ENST00000383832 ERCC6Q03468 1493 aa32.43■■■□□ 2.78
CPNE9-203ENST00000383832 APLP2Q06481 763 aa32.37■■■□□ 2.77
CPNE9-203ENST00000383832 AQRO60306 1485 aaKnown RBP eCLIP32.33■■■□□ 2.77
CPNE9-203ENST00000383832 PBRM1Q86U86 1689 aa32.33■■■□□ 2.77
CPNE9-203ENST00000383832 CTTNBP2Q8WZ74 1663 aa32.32■■■□□ 2.77
CPNE9-203ENST00000383832 IFT140Q96RY7 1462 aa32.31■■■□□ 2.76
CPNE9-203ENST00000383832 THOC2Q8NI27 1593 aaKnown RBP32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms