Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
RNF11Q9Y3C5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF11Q9Y3C5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RNF11Q9Y3C5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RNF11Q9Y3C5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNF11Q9Y3C5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF11Q9Y3C5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF11Q9Y3C5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.41■■□□□ 1.82
RNF11Q9Y3C5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF11Q9Y3C5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RNF11Q9Y3C5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.39■■□□□ 1.82
RNF11Q9Y3C5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.39■■□□□ 1.82
RNF11Q9Y3C5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.39■■□□□ 1.82
RNF11Q9Y3C5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF11Q9Y3C5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF11Q9Y3C5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF11Q9Y3C5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RNF11Q9Y3C5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF11Q9Y3C5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RNF11Q9Y3C5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RNF11Q9Y3C5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RNF11Q9Y3C5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF11Q9Y3C5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.32■■□□□ 1.8
RNF11Q9Y3C5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF11Q9Y3C5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF11Q9Y3C5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF11Q9Y3C5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF11Q9Y3C5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.29■■□□□ 1.8
RNF11Q9Y3C5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF11Q9Y3C5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF11Q9Y3C5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF11Q9Y3C5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF11Q9Y3C5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
RNF11Q9Y3C5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF11Q9Y3C5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF11Q9Y3C5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF11Q9Y3C5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF11Q9Y3C5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
RNF11Q9Y3C5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF11Q9Y3C5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.16■■□□□ 1.78
RNF11Q9Y3C5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF11Q9Y3C5 ABCB10P1-201ENST00000614297 2181 ntBASIC26.15■■□□□ 1.78
RNF11Q9Y3C5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RNF11Q9Y3C5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.15■■□□□ 1.78
RNF11Q9Y3C5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.14■■□□□ 1.78
RNF11Q9Y3C5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.14■■□□□ 1.78
RNF11Q9Y3C5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.77
RNF11Q9Y3C5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF11Q9Y3C5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RNF11Q9Y3C5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
RNF11Q9Y3C5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.13■■□□□ 1.77
RNF11Q9Y3C5 AL161658.1-201ENST00000623641 1967 ntBASIC26.11■■□□□ 1.77
RNF11Q9Y3C5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RNF11Q9Y3C5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.09■■□□□ 1.77
RNF11Q9Y3C5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RNF11Q9Y3C5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.07■■□□□ 1.76
RNF11Q9Y3C5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF11Q9Y3C5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF11Q9Y3C5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF11Q9Y3C5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF11Q9Y3C5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RNF11Q9Y3C5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF11Q9Y3C5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF11Q9Y3C5 ABCB10P3-201ENST00000561950 2166 ntBASIC26.05■■□□□ 1.76
RNF11Q9Y3C5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
RNF11Q9Y3C5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF11Q9Y3C5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.04■■□□□ 1.76
RNF11Q9Y3C5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF11Q9Y3C5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF11Q9Y3C5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RNF11Q9Y3C5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF11Q9Y3C5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF11Q9Y3C5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF11Q9Y3C5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
RNF11Q9Y3C5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF11Q9Y3C5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RNF11Q9Y3C5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
RNF11Q9Y3C5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF11Q9Y3C5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.01■■□□□ 1.75
RNF11Q9Y3C5 AL133380.1-201ENST00000506013 324 ntBASIC26.01■■□□□ 1.75
RNF11Q9Y3C5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF11Q9Y3C5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26■■□□□ 1.75
RNF11Q9Y3C5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RNF11Q9Y3C5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
RNF11Q9Y3C5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF11Q9Y3C5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RNF11Q9Y3C5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
RNF11Q9Y3C5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF11Q9Y3C5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF11Q9Y3C5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.96■■□□□ 1.75
RNF11Q9Y3C5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
RNF11Q9Y3C5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RNF11Q9Y3C5 WASH5P-204ENST00000632292 975 ntBASIC25.95■■□□□ 1.74
RNF11Q9Y3C5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF11Q9Y3C5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF11Q9Y3C5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF11Q9Y3C5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF11Q9Y3C5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RNF11Q9Y3C5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF11Q9Y3C5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms