Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TMEM40Q8WWA1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.02■■■□□ 2.4
TMEM40Q8WWA1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TMEM40Q8WWA1 AC005559.1-201ENST00000589661 871 ntBASIC30■■■□□ 2.39
TMEM40Q8WWA1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
TMEM40Q8WWA1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TMEM40Q8WWA1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
TMEM40Q8WWA1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
TMEM40Q8WWA1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.98■■■□□ 2.39
TMEM40Q8WWA1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
TMEM40Q8WWA1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.96■■■□□ 2.39
TMEM40Q8WWA1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.96■■■□□ 2.39
TMEM40Q8WWA1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.95■■■□□ 2.38
TMEM40Q8WWA1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
TMEM40Q8WWA1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.38
TMEM40Q8WWA1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TMEM40Q8WWA1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TMEM40Q8WWA1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
TMEM40Q8WWA1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TMEM40Q8WWA1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
TMEM40Q8WWA1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
TMEM40Q8WWA1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
TMEM40Q8WWA1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TMEM40Q8WWA1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TMEM40Q8WWA1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.9■■■□□ 2.38
TMEM40Q8WWA1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.9■■■□□ 2.38
TMEM40Q8WWA1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
TMEM40Q8WWA1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
TMEM40Q8WWA1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.88■■■□□ 2.37
TMEM40Q8WWA1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
TMEM40Q8WWA1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.85■■■□□ 2.37
TMEM40Q8WWA1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
TMEM40Q8WWA1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TMEM40Q8WWA1 AC044849.2-201ENST00000606596 710 ntBASIC29.84■■■□□ 2.37
TMEM40Q8WWA1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.83■■■□□ 2.37
TMEM40Q8WWA1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
TMEM40Q8WWA1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.82■■■□□ 2.36
TMEM40Q8WWA1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
TMEM40Q8WWA1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TMEM40Q8WWA1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TMEM40Q8WWA1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TMEM40Q8WWA1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.77■■■□□ 2.36
TMEM40Q8WWA1 ABHD17AP4-201ENST00000411545 909 ntBASIC29.77■■■□□ 2.36
TMEM40Q8WWA1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMEM40Q8WWA1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
TMEM40Q8WWA1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TMEM40Q8WWA1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TMEM40Q8WWA1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
TMEM40Q8WWA1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TMEM40Q8WWA1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TMEM40Q8WWA1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TMEM40Q8WWA1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.72■■■□□ 2.35
TMEM40Q8WWA1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TMEM40Q8WWA1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.7■■■□□ 2.34
TMEM40Q8WWA1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
TMEM40Q8WWA1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.69■■■□□ 2.34
TMEM40Q8WWA1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
TMEM40Q8WWA1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TMEM40Q8WWA1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TMEM40Q8WWA1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TMEM40Q8WWA1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
TMEM40Q8WWA1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.67■■■□□ 2.34
TMEM40Q8WWA1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
TMEM40Q8WWA1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.66■■■□□ 2.34
TMEM40Q8WWA1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
TMEM40Q8WWA1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.66■■■□□ 2.34
TMEM40Q8WWA1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TMEM40Q8WWA1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TMEM40Q8WWA1 MIR7108-201ENST00000614319 87 ntBASIC29.65■■■□□ 2.34
TMEM40Q8WWA1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TMEM40Q8WWA1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
TMEM40Q8WWA1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
TMEM40Q8WWA1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
TMEM40Q8WWA1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.63■■■□□ 2.33
TMEM40Q8WWA1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.63■■■□□ 2.33
TMEM40Q8WWA1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
TMEM40Q8WWA1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.62■■■□□ 2.33
TMEM40Q8WWA1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
TMEM40Q8WWA1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
TMEM40Q8WWA1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.61■■■□□ 2.33
TMEM40Q8WWA1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.59■■■□□ 2.33
TMEM40Q8WWA1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TMEM40Q8WWA1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.59■■■□□ 2.33
TMEM40Q8WWA1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
TMEM40Q8WWA1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.59■■■□□ 2.33
TMEM40Q8WWA1 AC120057.4-201ENST00000624722 1615 ntBASIC29.56■■■□□ 2.32
TMEM40Q8WWA1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TMEM40Q8WWA1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TMEM40Q8WWA1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.56■■■□□ 2.32
TMEM40Q8WWA1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TMEM40Q8WWA1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TMEM40Q8WWA1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TMEM40Q8WWA1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.55■■■□□ 2.32
TMEM40Q8WWA1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.55■■■□□ 2.32
TMEM40Q8WWA1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.54■■■□□ 2.32
TMEM40Q8WWA1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.53■■■□□ 2.32
TMEM40Q8WWA1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TMEM40Q8WWA1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.51■■■□□ 2.31
TMEM40Q8WWA1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TMEM40Q8WWA1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms