Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SHROOM3Q8TF72 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SHROOM3Q8TF72 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM3Q8TF72 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM3Q8TF72 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM3Q8TF72 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM3Q8TF72 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM3Q8TF72 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.85■■■□□ 2.05
SHROOM3Q8TF72 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.85■■■□□ 2.05
SHROOM3Q8TF72 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.85■■■□□ 2.05
SHROOM3Q8TF72 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM3Q8TF72 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.84■■■□□ 2.05
SHROOM3Q8TF72 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SHROOM3Q8TF72 AC136428.2-201ENST00000563187 214 ntBASIC27.82■■■□□ 2.04
SHROOM3Q8TF72 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SHROOM3Q8TF72 RPS2P35-201ENST00000443417 897 ntBASIC27.81■■■□□ 2.04
SHROOM3Q8TF72 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.8■■■□□ 2.04
SHROOM3Q8TF72 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
SHROOM3Q8TF72 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SHROOM3Q8TF72 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SHROOM3Q8TF72 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.78■■■□□ 2.04
SHROOM3Q8TF72 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM3Q8TF72 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM3Q8TF72 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM3Q8TF72 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SHROOM3Q8TF72 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM3Q8TF72 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
SHROOM3Q8TF72 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM3Q8TF72 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.75■■■□□ 2.03
SHROOM3Q8TF72 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.75■■■□□ 2.03
SHROOM3Q8TF72 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SHROOM3Q8TF72 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SHROOM3Q8TF72 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.73■■■□□ 2.03
SHROOM3Q8TF72 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.73■■■□□ 2.03
SHROOM3Q8TF72 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.71■■■□□ 2.03
SHROOM3Q8TF72 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHROOM3Q8TF72 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHROOM3Q8TF72 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHROOM3Q8TF72 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SHROOM3Q8TF72 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SHROOM3Q8TF72 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SHROOM3Q8TF72 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SHROOM3Q8TF72 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.65■■■□□ 2.02
SHROOM3Q8TF72 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
SHROOM3Q8TF72 AC097358.2-201ENST00000607541 1159 ntBASIC27.62■■■□□ 2.01
SHROOM3Q8TF72 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.62■■■□□ 2.01
SHROOM3Q8TF72 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.62■■■□□ 2.01
SHROOM3Q8TF72 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SHROOM3Q8TF72 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SHROOM3Q8TF72 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SHROOM3Q8TF72 WASH5P-204ENST00000632292 975 ntBASIC27.6■■■□□ 2.01
SHROOM3Q8TF72 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SHROOM3Q8TF72 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
SHROOM3Q8TF72 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SHROOM3Q8TF72 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.59■■■□□ 2.01
SHROOM3Q8TF72 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SHROOM3Q8TF72 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SHROOM3Q8TF72 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SHROOM3Q8TF72 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SHROOM3Q8TF72 AL161658.1-201ENST00000623641 1967 ntBASIC27.57■■■□□ 2
SHROOM3Q8TF72 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.57■■■□□ 2
SHROOM3Q8TF72 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.55■■■□□ 2
SHROOM3Q8TF72 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
SHROOM3Q8TF72 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.54■■■□□ 2
SHROOM3Q8TF72 AL391121.1-201ENST00000607967 1349 ntBASIC27.54■■■□□ 2
SHROOM3Q8TF72 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SHROOM3Q8TF72 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.53■■■□□ 2
SHROOM3Q8TF72 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SHROOM3Q8TF72 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.52■■■□□ 2
SHROOM3Q8TF72 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.52■■■□□ 2
SHROOM3Q8TF72 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
SHROOM3Q8TF72 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SHROOM3Q8TF72 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
SHROOM3Q8TF72 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.49■■□□□ 1.99
SHROOM3Q8TF72 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.49■■□□□ 1.99
SHROOM3Q8TF72 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SHROOM3Q8TF72 SUZ12P1-203ENST00000578195 985 ntBASIC27.48■■□□□ 1.99
SHROOM3Q8TF72 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SHROOM3Q8TF72 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SHROOM3Q8TF72 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SHROOM3Q8TF72 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SHROOM3Q8TF72 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SHROOM3Q8TF72 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SHROOM3Q8TF72 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SHROOM3Q8TF72 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.44■■□□□ 1.98
SHROOM3Q8TF72 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.44■■□□□ 1.98
SHROOM3Q8TF72 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SHROOM3Q8TF72 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.43■■□□□ 1.98
SHROOM3Q8TF72 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
SHROOM3Q8TF72 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SHROOM3Q8TF72 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.42■■□□□ 1.98
SHROOM3Q8TF72 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SHROOM3Q8TF72 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SHROOM3Q8TF72 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SHROOM3Q8TF72 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SHROOM3Q8TF72 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
SHROOM3Q8TF72 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
SHROOM3Q8TF72 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
SHROOM3Q8TF72 CAHM-201ENST00000604200 896 ntBASIC27.37■■□□□ 1.97
SHROOM3Q8TF72 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms