Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TMEM116Q8NCL8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM116Q8NCL8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM116Q8NCL8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM116Q8NCL8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM116Q8NCL8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM116Q8NCL8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.34■■□□□ 1.01
TMEM116Q8NCL8 AL031258.1-201ENST00000623562 325 ntBASIC21.33■■□□□ 1.01
TMEM116Q8NCL8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMEM116Q8NCL8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM116Q8NCL8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM116Q8NCL8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
TMEM116Q8NCL8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM116Q8NCL8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM116Q8NCL8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.29■■□□□ 1
TMEM116Q8NCL8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM116Q8NCL8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.28■■□□□ 1
TMEM116Q8NCL8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.28■■□□□ 1
TMEM116Q8NCL8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM116Q8NCL8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.27■■□□□ 1
TMEM116Q8NCL8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM116Q8NCL8 ABCB10P1-201ENST00000614297 2181 ntBASIC21.26■□□□□ 0.99
TMEM116Q8NCL8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM116Q8NCL8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM116Q8NCL8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM116Q8NCL8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM116Q8NCL8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.25■□□□□ 0.99
TMEM116Q8NCL8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM116Q8NCL8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEM116Q8NCL8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TMEM116Q8NCL8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM116Q8NCL8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM116Q8NCL8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM116Q8NCL8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM116Q8NCL8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM116Q8NCL8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
TMEM116Q8NCL8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM116Q8NCL8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.19■□□□□ 0.98
TMEM116Q8NCL8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM116Q8NCL8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM116Q8NCL8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM116Q8NCL8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TMEM116Q8NCL8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM116Q8NCL8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM116Q8NCL8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM116Q8NCL8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM116Q8NCL8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TMEM116Q8NCL8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TMEM116Q8NCL8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM116Q8NCL8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TMEM116Q8NCL8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM116Q8NCL8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TMEM116Q8NCL8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM116Q8NCL8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM116Q8NCL8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM116Q8NCL8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM116Q8NCL8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM116Q8NCL8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM116Q8NCL8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM116Q8NCL8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
TMEM116Q8NCL8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
TMEM116Q8NCL8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM116Q8NCL8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.08■□□□□ 0.97
TMEM116Q8NCL8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM116Q8NCL8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM116Q8NCL8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM116Q8NCL8 ABCB10P3-201ENST00000561950 2166 ntBASIC21.07■□□□□ 0.96
TMEM116Q8NCL8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM116Q8NCL8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM116Q8NCL8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM116Q8NCL8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM116Q8NCL8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TMEM116Q8NCL8 AL161658.1-201ENST00000623641 1967 ntBASIC21.05■□□□□ 0.96
TMEM116Q8NCL8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
TMEM116Q8NCL8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM116Q8NCL8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM116Q8NCL8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM116Q8NCL8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM116Q8NCL8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM116Q8NCL8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM116Q8NCL8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM116Q8NCL8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM116Q8NCL8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEM116Q8NCL8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM116Q8NCL8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TMEM116Q8NCL8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM116Q8NCL8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM116Q8NCL8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM116Q8NCL8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM116Q8NCL8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM116Q8NCL8 ST7-AS1-201ENST00000456775 1889 ntBASIC21■□□□□ 0.95
TMEM116Q8NCL8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM116Q8NCL8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21■□□□□ 0.95
TMEM116Q8NCL8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TMEM116Q8NCL8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM116Q8NCL8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM116Q8NCL8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM116Q8NCL8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM116Q8NCL8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM116Q8NCL8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms