Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SUZ12P1-203ENST00000578195 985 ntBASIC26.99■■□□□ 1.91
TRAM1L1Q8N609 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRAM1L1Q8N609 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRAM1L1Q8N609 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.98■■□□□ 1.91
TRAM1L1Q8N609 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRAM1L1Q8N609 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRAM1L1Q8N609 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRAM1L1Q8N609 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRAM1L1Q8N609 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.97■■□□□ 1.91
TRAM1L1Q8N609 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.97■■□□□ 1.91
TRAM1L1Q8N609 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.96■■□□□ 1.91
TRAM1L1Q8N609 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRAM1L1Q8N609 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
TRAM1L1Q8N609 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRAM1L1Q8N609 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRAM1L1Q8N609 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRAM1L1Q8N609 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRAM1L1Q8N609 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRAM1L1Q8N609 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TRAM1L1Q8N609 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.92■■□□□ 1.9
TRAM1L1Q8N609 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.92■■□□□ 1.9
TRAM1L1Q8N609 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TRAM1L1Q8N609 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.91■■□□□ 1.9
TRAM1L1Q8N609 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
TRAM1L1Q8N609 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TRAM1L1Q8N609 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TRAM1L1Q8N609 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TRAM1L1Q8N609 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
TRAM1L1Q8N609 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TRAM1L1Q8N609 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.87■■□□□ 1.89
TRAM1L1Q8N609 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.86■■□□□ 1.89
TRAM1L1Q8N609 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRAM1L1Q8N609 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRAM1L1Q8N609 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRAM1L1Q8N609 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
TRAM1L1Q8N609 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TRAM1L1Q8N609 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
TRAM1L1Q8N609 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TRAM1L1Q8N609 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRAM1L1Q8N609 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRAM1L1Q8N609 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.78■■□□□ 1.88
TRAM1L1Q8N609 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
TRAM1L1Q8N609 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRAM1L1Q8N609 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRAM1L1Q8N609 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.88
TRAM1L1Q8N609 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRAM1L1Q8N609 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRAM1L1Q8N609 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
TRAM1L1Q8N609 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRAM1L1Q8N609 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TRAM1L1Q8N609 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
TRAM1L1Q8N609 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRAM1L1Q8N609 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TRAM1L1Q8N609 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TRAM1L1Q8N609 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TRAM1L1Q8N609 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.7■■□□□ 1.86
TRAM1L1Q8N609 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRAM1L1Q8N609 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.68■■□□□ 1.86
TRAM1L1Q8N609 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.67■■□□□ 1.86
TRAM1L1Q8N609 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.67■■□□□ 1.86
TRAM1L1Q8N609 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRAM1L1Q8N609 MIR762-201ENST00000390236 83 ntBASIC26.66■■□□□ 1.86
TRAM1L1Q8N609 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
TRAM1L1Q8N609 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRAM1L1Q8N609 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.65■■□□□ 1.86
TRAM1L1Q8N609 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRAM1L1Q8N609 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRAM1L1Q8N609 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TRAM1L1Q8N609 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRAM1L1Q8N609 AL161658.1-201ENST00000623641 1967 ntBASIC26.63■■□□□ 1.85
TRAM1L1Q8N609 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.62■■□□□ 1.85
TRAM1L1Q8N609 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRAM1L1Q8N609 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
TRAM1L1Q8N609 AP006261.1-201ENST00000584783 668 ntBASIC26.6■■□□□ 1.85
TRAM1L1Q8N609 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRAM1L1Q8N609 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRAM1L1Q8N609 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.59■■□□□ 1.85
TRAM1L1Q8N609 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRAM1L1Q8N609 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TRAM1L1Q8N609 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.58■■□□□ 1.85
TRAM1L1Q8N609 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.58■■□□□ 1.85
TRAM1L1Q8N609 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
TRAM1L1Q8N609 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRAM1L1Q8N609 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRAM1L1Q8N609 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TRAM1L1Q8N609 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.57■■□□□ 1.84
TRAM1L1Q8N609 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRAM1L1Q8N609 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
TRAM1L1Q8N609 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRAM1L1Q8N609 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TRAM1L1Q8N609 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRAM1L1Q8N609 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.55■■□□□ 1.84
TRAM1L1Q8N609 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRAM1L1Q8N609 AC005559.1-201ENST00000589661 871 ntBASIC26.54■■□□□ 1.84
TRAM1L1Q8N609 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
TRAM1L1Q8N609 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRAM1L1Q8N609 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.53■■□□□ 1.84
TRAM1L1Q8N609 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRAM1L1Q8N609 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRAM1L1Q8N609 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms