Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RFX6Q8HWS3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.2■■■□□ 2.1
RFX6Q8HWS3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RFX6Q8HWS3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RFX6Q8HWS3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RFX6Q8HWS3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.17■■■□□ 2.1
RFX6Q8HWS3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RFX6Q8HWS3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RFX6Q8HWS3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.12■■■□□ 2.09
RFX6Q8HWS3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RFX6Q8HWS3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
RFX6Q8HWS3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RFX6Q8HWS3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.08■■■□□ 2.09
RFX6Q8HWS3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.07■■■□□ 2.08
RFX6Q8HWS3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RFX6Q8HWS3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RFX6Q8HWS3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
RFX6Q8HWS3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RFX6Q8HWS3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.05■■■□□ 2.08
RFX6Q8HWS3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFX6Q8HWS3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.04■■■□□ 2.08
RFX6Q8HWS3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
RFX6Q8HWS3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.02■■■□□ 2.08
RFX6Q8HWS3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RFX6Q8HWS3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.02■■■□□ 2.08
RFX6Q8HWS3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.02■■■□□ 2.08
RFX6Q8HWS3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28■■■□□ 2.07
RFX6Q8HWS3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RFX6Q8HWS3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RFX6Q8HWS3 AL161658.1-201ENST00000623641 1967 ntBASIC27.97■■■□□ 2.07
RFX6Q8HWS3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RFX6Q8HWS3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RFX6Q8HWS3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RFX6Q8HWS3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.94■■■□□ 2.06
RFX6Q8HWS3 ABCB10P1-201ENST00000614297 2181 ntBASIC27.94■■■□□ 2.06
RFX6Q8HWS3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.93■■■□□ 2.06
RFX6Q8HWS3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.93■■■□□ 2.06
RFX6Q8HWS3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RFX6Q8HWS3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.91■■■□□ 2.06
RFX6Q8HWS3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RFX6Q8HWS3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.9■■■□□ 2.06
RFX6Q8HWS3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
RFX6Q8HWS3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RFX6Q8HWS3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RFX6Q8HWS3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.89■■■□□ 2.06
RFX6Q8HWS3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
RFX6Q8HWS3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RFX6Q8HWS3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RFX6Q8HWS3 AL133380.1-201ENST00000506013 324 ntBASIC27.87■■■□□ 2.05
RFX6Q8HWS3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.87■■■□□ 2.05
RFX6Q8HWS3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
RFX6Q8HWS3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
RFX6Q8HWS3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RFX6Q8HWS3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RFX6Q8HWS3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
RFX6Q8HWS3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RFX6Q8HWS3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
RFX6Q8HWS3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.81■■■□□ 2.04
RFX6Q8HWS3 WASH5P-204ENST00000632292 975 ntBASIC27.81■■■□□ 2.04
RFX6Q8HWS3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
RFX6Q8HWS3 RARRES2P7-201ENST00000567349 469 ntBASIC27.8■■■□□ 2.04
RFX6Q8HWS3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RFX6Q8HWS3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RFX6Q8HWS3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RFX6Q8HWS3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
RFX6Q8HWS3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RFX6Q8HWS3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
RFX6Q8HWS3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.78■■■□□ 2.04
RFX6Q8HWS3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RFX6Q8HWS3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.04
RFX6Q8HWS3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RFX6Q8HWS3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RFX6Q8HWS3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RFX6Q8HWS3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RFX6Q8HWS3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.74■■■□□ 2.03
RFX6Q8HWS3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RFX6Q8HWS3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
RFX6Q8HWS3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
RFX6Q8HWS3 SETD8P1-201ENST00000623146 1180 ntBASIC27.71■■■□□ 2.03
RFX6Q8HWS3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.71■■■□□ 2.03
RFX6Q8HWS3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
RFX6Q8HWS3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
RFX6Q8HWS3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RFX6Q8HWS3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RFX6Q8HWS3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RFX6Q8HWS3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RFX6Q8HWS3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RFX6Q8HWS3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RFX6Q8HWS3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.68■■■□□ 2.02
RFX6Q8HWS3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RFX6Q8HWS3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RFX6Q8HWS3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RFX6Q8HWS3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RFX6Q8HWS3 ST7-AS1-201ENST00000456775 1889 ntBASIC27.65■■■□□ 2.02
RFX6Q8HWS3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RFX6Q8HWS3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RFX6Q8HWS3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RFX6Q8HWS3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
RFX6Q8HWS3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
RFX6Q8HWS3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms