Protein–RNA interactions for Protein: Q71SY5

MED25, Mediator of RNA polymerase II transcription subunit 25, humanhuman

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED25Q71SY5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
MED25Q71SY5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
MED25Q71SY5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.76■■□□□ 1.71
MED25Q71SY5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
MED25Q71SY5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
MED25Q71SY5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
MED25Q71SY5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.75■■□□□ 1.71
MED25Q71SY5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
MED25Q71SY5 MIR3665-201ENST00000578708 105 ntBASIC25.74■■□□□ 1.71
MED25Q71SY5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
MED25Q71SY5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.73■■□□□ 1.71
MED25Q71SY5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MED25Q71SY5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
MED25Q71SY5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
MED25Q71SY5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
MED25Q71SY5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.69■■□□□ 1.7
MED25Q71SY5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MED25Q71SY5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MED25Q71SY5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.67■■□□□ 1.7
MED25Q71SY5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.67■■□□□ 1.7
MED25Q71SY5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.67■■□□□ 1.7
MED25Q71SY5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MED25Q71SY5 WASH5P-204ENST00000632292 975 ntBASIC25.65■■□□□ 1.7
MED25Q71SY5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
MED25Q71SY5 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.64■■□□□ 1.7
MED25Q71SY5 AC120057.4-201ENST00000624722 1615 ntBASIC25.63■■□□□ 1.69
MED25Q71SY5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.63■■□□□ 1.69
MED25Q71SY5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
MED25Q71SY5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
MED25Q71SY5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.62■■□□□ 1.69
MED25Q71SY5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
MED25Q71SY5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.6■■□□□ 1.69
MED25Q71SY5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
MED25Q71SY5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.6■■□□□ 1.69
MED25Q71SY5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
MED25Q71SY5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
MED25Q71SY5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
MED25Q71SY5 MIR762-201ENST00000390236 83 ntBASIC25.58■■□□□ 1.69
MED25Q71SY5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
MED25Q71SY5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
MED25Q71SY5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
MED25Q71SY5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MED25Q71SY5 DUX4L28-201ENST00000623687 678 ntBASIC25.55■■□□□ 1.68
MED25Q71SY5 AC087741.3-201ENST00000624270 1347 ntBASIC25.55■■□□□ 1.68
MED25Q71SY5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.54■■□□□ 1.68
MED25Q71SY5 AC005559.1-201ENST00000589661 871 ntBASIC25.54■■□□□ 1.68
MED25Q71SY5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.53■■□□□ 1.68
MED25Q71SY5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
MED25Q71SY5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
MED25Q71SY5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MED25Q71SY5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MED25Q71SY5 AC044849.2-201ENST00000606596 710 ntBASIC25.51■■□□□ 1.67
MED25Q71SY5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
MED25Q71SY5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
MED25Q71SY5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.5■■□□□ 1.67
MED25Q71SY5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
MED25Q71SY5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
MED25Q71SY5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.48■■□□□ 1.67
MED25Q71SY5 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
MED25Q71SY5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MED25Q71SY5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MED25Q71SY5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.47■■□□□ 1.67
MED25Q71SY5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.46■■□□□ 1.67
MED25Q71SY5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
MED25Q71SY5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
MED25Q71SY5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MED25Q71SY5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.44■■□□□ 1.66
MED25Q71SY5 ABHD17AP4-201ENST00000411545 909 ntBASIC25.44■■□□□ 1.66
MED25Q71SY5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MED25Q71SY5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.43■■□□□ 1.66
MED25Q71SY5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
MED25Q71SY5 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
MED25Q71SY5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
MED25Q71SY5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
MED25Q71SY5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
MED25Q71SY5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
MED25Q71SY5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
MED25Q71SY5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
MED25Q71SY5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
MED25Q71SY5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MED25Q71SY5 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MED25Q71SY5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
MED25Q71SY5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
MED25Q71SY5 MIR7108-201ENST00000614319 87 ntBASIC25.37■■□□□ 1.65
MED25Q71SY5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MED25Q71SY5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
MED25Q71SY5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
MED25Q71SY5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
MED25Q71SY5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MED25Q71SY5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MED25Q71SY5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
MED25Q71SY5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MED25Q71SY5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MED25Q71SY5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MED25Q71SY5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MED25Q71SY5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MED25Q71SY5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MED25Q71SY5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MED25Q71SY5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MED25Q71SY5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms