Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.48■■■□□ 2.63
SNRNP48Q6IEG0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SNRNP48Q6IEG0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SNRNP48Q6IEG0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SNRNP48Q6IEG0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
SNRNP48Q6IEG0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.44■■■□□ 2.62
SNRNP48Q6IEG0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
SNRNP48Q6IEG0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SNRNP48Q6IEG0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
SNRNP48Q6IEG0 AC044849.2-201ENST00000606596 710 ntBASIC31.41■■■□□ 2.62
SNRNP48Q6IEG0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNRNP48Q6IEG0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNRNP48Q6IEG0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNRNP48Q6IEG0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.38■■■□□ 2.61
SNRNP48Q6IEG0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
SNRNP48Q6IEG0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.33■■■□□ 2.61
SNRNP48Q6IEG0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.33■■■□□ 2.61
SNRNP48Q6IEG0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNRNP48Q6IEG0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNRNP48Q6IEG0 ABHD17AP4-201ENST00000411545 909 ntBASIC31.32■■■□□ 2.6
SNRNP48Q6IEG0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.32■■■□□ 2.6
SNRNP48Q6IEG0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.32■■■□□ 2.6
SNRNP48Q6IEG0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNRNP48Q6IEG0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNRNP48Q6IEG0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNRNP48Q6IEG0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNRNP48Q6IEG0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNRNP48Q6IEG0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.29■■■□□ 2.6
SNRNP48Q6IEG0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SNRNP48Q6IEG0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SNRNP48Q6IEG0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SNRNP48Q6IEG0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
SNRNP48Q6IEG0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SNRNP48Q6IEG0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SNRNP48Q6IEG0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.28■■■□□ 2.6
SNRNP48Q6IEG0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
SNRNP48Q6IEG0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SNRNP48Q6IEG0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNRNP48Q6IEG0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SNRNP48Q6IEG0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SNRNP48Q6IEG0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNRNP48Q6IEG0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNRNP48Q6IEG0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.24■■■□□ 2.59
SNRNP48Q6IEG0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SNRNP48Q6IEG0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNRNP48Q6IEG0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SNRNP48Q6IEG0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SNRNP48Q6IEG0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.22■■■□□ 2.59
SNRNP48Q6IEG0 MIR7108-201ENST00000614319 87 ntBASIC31.22■■■□□ 2.59
SNRNP48Q6IEG0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.21■■■□□ 2.59
SNRNP48Q6IEG0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SNRNP48Q6IEG0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SNRNP48Q6IEG0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNRNP48Q6IEG0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SNRNP48Q6IEG0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SNRNP48Q6IEG0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SNRNP48Q6IEG0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.18■■■□□ 2.58
SNRNP48Q6IEG0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SNRNP48Q6IEG0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
SNRNP48Q6IEG0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
SNRNP48Q6IEG0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.16■■■□□ 2.58
SNRNP48Q6IEG0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.16■■■□□ 2.58
SNRNP48Q6IEG0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNRNP48Q6IEG0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SNRNP48Q6IEG0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SNRNP48Q6IEG0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.12■■■□□ 2.57
SNRNP48Q6IEG0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNRNP48Q6IEG0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNRNP48Q6IEG0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.1■■■□□ 2.57
SNRNP48Q6IEG0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.1■■■□□ 2.57
SNRNP48Q6IEG0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.1■■■□□ 2.57
SNRNP48Q6IEG0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SNRNP48Q6IEG0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.09■■■□□ 2.57
SNRNP48Q6IEG0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SNRNP48Q6IEG0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.08■■■□□ 2.57
SNRNP48Q6IEG0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SNRNP48Q6IEG0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.06■■■□□ 2.56
SNRNP48Q6IEG0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.06■■■□□ 2.56
SNRNP48Q6IEG0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNRNP48Q6IEG0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SNRNP48Q6IEG0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SNRNP48Q6IEG0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.04■■■□□ 2.56
SNRNP48Q6IEG0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.04■■■□□ 2.56
SNRNP48Q6IEG0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SNRNP48Q6IEG0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
SNRNP48Q6IEG0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNRNP48Q6IEG0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.02■■■□□ 2.56
SNRNP48Q6IEG0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.01■■■□□ 2.56
SNRNP48Q6IEG0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31■■■□□ 2.55
SNRNP48Q6IEG0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SNRNP48Q6IEG0 ZNRF2P2-203ENST00000454624 420 ntBASIC31■■■□□ 2.55
SNRNP48Q6IEG0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.99■■■□□ 2.55
SNRNP48Q6IEG0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.98■■■□□ 2.55
SNRNP48Q6IEG0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SNRNP48Q6IEG0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SNRNP48Q6IEG0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SNRNP48Q6IEG0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SNRNP48Q6IEG0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.95■■■□□ 2.55
SNRNP48Q6IEG0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.94■■■□□ 2.54
SNRNP48Q6IEG0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms