Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SNX30Q5VWJ9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.56■■■□□ 2.16
SNX30Q5VWJ9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SNX30Q5VWJ9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SNX30Q5VWJ9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
SNX30Q5VWJ9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.53■■■□□ 2.16
SNX30Q5VWJ9 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.53■■■□□ 2.16
SNX30Q5VWJ9 AP006261.1-201ENST00000584783 668 ntBASIC28.52■■■□□ 2.16
SNX30Q5VWJ9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SNX30Q5VWJ9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SNX30Q5VWJ9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SNX30Q5VWJ9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SNX30Q5VWJ9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SNX30Q5VWJ9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SNX30Q5VWJ9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.47■■■□□ 2.15
SNX30Q5VWJ9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SNX30Q5VWJ9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNX30Q5VWJ9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SNX30Q5VWJ9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.47■■■□□ 2.15
SNX30Q5VWJ9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.46■■■□□ 2.15
SNX30Q5VWJ9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SNX30Q5VWJ9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.45■■■□□ 2.14
SNX30Q5VWJ9 AL162393.1-201ENST00000437852 946 ntBASIC28.44■■■□□ 2.14
SNX30Q5VWJ9 RPS2P35-201ENST00000443417 897 ntBASIC28.44■■■□□ 2.14
SNX30Q5VWJ9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNX30Q5VWJ9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.43■■■□□ 2.14
SNX30Q5VWJ9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.43■■■□□ 2.14
SNX30Q5VWJ9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SNX30Q5VWJ9 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.43■■■□□ 2.14
SNX30Q5VWJ9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.42■■■□□ 2.14
SNX30Q5VWJ9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
SNX30Q5VWJ9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNX30Q5VWJ9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNX30Q5VWJ9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.41■■■□□ 2.14
SNX30Q5VWJ9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNX30Q5VWJ9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNX30Q5VWJ9 MIR762-201ENST00000390236 83 ntBASIC28.4■■■□□ 2.14
SNX30Q5VWJ9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
SNX30Q5VWJ9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SNX30Q5VWJ9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.39■■■□□ 2.14
SNX30Q5VWJ9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SNX30Q5VWJ9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
SNX30Q5VWJ9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNX30Q5VWJ9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.36■■■□□ 2.13
SNX30Q5VWJ9 MIR3665-201ENST00000578708 105 ntBASIC28.36■■■□□ 2.13
SNX30Q5VWJ9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNX30Q5VWJ9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.34■■■□□ 2.13
SNX30Q5VWJ9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SNX30Q5VWJ9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.33■■■□□ 2.12
SNX30Q5VWJ9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNX30Q5VWJ9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SNX30Q5VWJ9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.31■■■□□ 2.12
SNX30Q5VWJ9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.31■■■□□ 2.12
SNX30Q5VWJ9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNX30Q5VWJ9 AC120057.4-201ENST00000624722 1615 ntBASIC28.29■■■□□ 2.12
SNX30Q5VWJ9 DUX4L28-201ENST00000623687 678 ntBASIC28.29■■■□□ 2.12
SNX30Q5VWJ9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SNX30Q5VWJ9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
SNX30Q5VWJ9 AC005559.1-201ENST00000589661 871 ntBASIC28.28■■■□□ 2.12
SNX30Q5VWJ9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
SNX30Q5VWJ9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNX30Q5VWJ9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNX30Q5VWJ9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNX30Q5VWJ9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.24■■■□□ 2.11
SNX30Q5VWJ9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNX30Q5VWJ9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNX30Q5VWJ9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNX30Q5VWJ9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.22■■■□□ 2.11
SNX30Q5VWJ9 AC087741.3-201ENST00000624270 1347 ntBASIC28.21■■■□□ 2.11
SNX30Q5VWJ9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNX30Q5VWJ9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.2■■■□□ 2.1
SNX30Q5VWJ9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNX30Q5VWJ9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNX30Q5VWJ9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
SNX30Q5VWJ9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNX30Q5VWJ9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.18■■■□□ 2.1
SNX30Q5VWJ9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNX30Q5VWJ9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNX30Q5VWJ9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SNX30Q5VWJ9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SNX30Q5VWJ9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.15■■■□□ 2.1
SNX30Q5VWJ9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SNX30Q5VWJ9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
SNX30Q5VWJ9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SNX30Q5VWJ9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
SNX30Q5VWJ9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNX30Q5VWJ9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SNX30Q5VWJ9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.13■■■□□ 2.09
SNX30Q5VWJ9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.13■■■□□ 2.09
SNX30Q5VWJ9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
SNX30Q5VWJ9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
SNX30Q5VWJ9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNX30Q5VWJ9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNX30Q5VWJ9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNX30Q5VWJ9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.1■■■□□ 2.09
SNX30Q5VWJ9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNX30Q5VWJ9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
SNX30Q5VWJ9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
SNX30Q5VWJ9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.09■■■□□ 2.09
SNX30Q5VWJ9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms