Protein–RNA interactions for Protein: Q15078

CDK5R1, Cyclin-dependent kinase 5 activator 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1Q15078 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK5R1Q15078 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5R1Q15078 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5R1Q15078 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5R1Q15078 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.93■■□□□ 1.42
CDK5R1Q15078 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5R1Q15078 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5R1Q15078 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5R1Q15078 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.91■■□□□ 1.42
CDK5R1Q15078 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5R1Q15078 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5R1Q15078 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5R1Q15078 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDK5R1Q15078 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CDK5R1Q15078 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5R1Q15078 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.87■■□□□ 1.41
CDK5R1Q15078 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5R1Q15078 AC139426.1-201ENST00000568218 2529 ntBASIC23.86■■□□□ 1.41
CDK5R1Q15078 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5R1Q15078 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5R1Q15078 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5R1Q15078 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.84■■□□□ 1.41
CDK5R1Q15078 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
CDK5R1Q15078 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5R1Q15078 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5R1Q15078 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5R1Q15078 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5R1Q15078 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5R1Q15078 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5R1Q15078 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK5R1Q15078 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK5R1Q15078 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDK5R1Q15078 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5R1Q15078 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.79■■□□□ 1.4
CDK5R1Q15078 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK5R1Q15078 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5R1Q15078 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5R1Q15078 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CDK5R1Q15078 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5R1Q15078 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5R1Q15078 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.76■■□□□ 1.39
CDK5R1Q15078 ZNRF2P1-201ENST00000441407 443 ntBASIC23.76■■□□□ 1.39
CDK5R1Q15078 ST7-AS1-201ENST00000456775 1889 ntBASIC23.76■■□□□ 1.39
CDK5R1Q15078 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5R1Q15078 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5R1Q15078 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
CDK5R1Q15078 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5R1Q15078 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.73■■□□□ 1.39
CDK5R1Q15078 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5R1Q15078 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.73■■□□□ 1.39
CDK5R1Q15078 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDK5R1Q15078 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDK5R1Q15078 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDK5R1Q15078 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDK5R1Q15078 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDK5R1Q15078 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5R1Q15078 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CDK5R1Q15078 AL161658.1-201ENST00000623641 1967 ntBASIC23.69■■□□□ 1.38
CDK5R1Q15078 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5R1Q15078 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDK5R1Q15078 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.67■■□□□ 1.38
CDK5R1Q15078 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDK5R1Q15078 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5R1Q15078 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5R1Q15078 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CDK5R1Q15078 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDK5R1Q15078 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5R1Q15078 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5R1Q15078 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDK5R1Q15078 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CDK5R1Q15078 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDK5R1Q15078 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDK5R1Q15078 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK5R1Q15078 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.6■■□□□ 1.37
CDK5R1Q15078 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDK5R1Q15078 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CDK5R1Q15078 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDK5R1Q15078 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDK5R1Q15078 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDK5R1Q15078 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDK5R1Q15078 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.57■■□□□ 1.36
CDK5R1Q15078 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CDK5R1Q15078 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK5R1Q15078 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK5R1Q15078 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CDK5R1Q15078 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CDK5R1Q15078 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDK5R1Q15078 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
CDK5R1Q15078 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK5R1Q15078 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDK5R1Q15078 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CDK5R1Q15078 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDK5R1Q15078 DYNLL1-208ENST00000550178 581 ntBASIC23.53■■□□□ 1.36
CDK5R1Q15078 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDK5R1Q15078 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
CDK5R1Q15078 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDK5R1Q15078 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK5R1Q15078 AL135925.1-201ENST00000605920 1701 ntBASIC23.5■■□□□ 1.35
CDK5R1Q15078 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CDK5R1Q15078 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms