Protein–RNA interactions for Protein: Q15078

CDK5R1, Cyclin-dependent kinase 5 activator 1, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1Q15078 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDK5R1Q15078 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5R1Q15078 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5R1Q15078 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5R1Q15078 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.93■■□□□ 1.42
CDK5R1Q15078 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDK5R1Q15078 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDK5R1Q15078 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5R1Q15078 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.91■■□□□ 1.42
CDK5R1Q15078 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5R1Q15078 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5R1Q15078 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDK5R1Q15078 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDK5R1Q15078 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CDK5R1Q15078 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5R1Q15078 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.87■■□□□ 1.41
CDK5R1Q15078 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDK5R1Q15078 AC139426.1-201ENST00000568218 2529 ntBASIC23.86■■□□□ 1.41
CDK5R1Q15078 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5R1Q15078 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5R1Q15078 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5R1Q15078 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.84■■□□□ 1.41
CDK5R1Q15078 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
CDK5R1Q15078 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5R1Q15078 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5R1Q15078 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5R1Q15078 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5R1Q15078 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5R1Q15078 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5R1Q15078 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK5R1Q15078 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK5R1Q15078 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDK5R1Q15078 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5R1Q15078 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.79■■□□□ 1.4
CDK5R1Q15078 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.79■■□□□ 1.4
CDK5R1Q15078 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDK5R1Q15078 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5R1Q15078 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CDK5R1Q15078 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK5R1Q15078 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK5R1Q15078 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.76■■□□□ 1.39
CDK5R1Q15078 ZNRF2P1-201ENST00000441407 443 ntBASIC23.76■■□□□ 1.39
CDK5R1Q15078 ST7-AS1-201ENST00000456775 1889 ntBASIC23.76■■□□□ 1.39
CDK5R1Q15078 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5R1Q15078 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK5R1Q15078 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
CDK5R1Q15078 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5R1Q15078 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.73■■□□□ 1.39
CDK5R1Q15078 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5R1Q15078 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.73■■□□□ 1.39
CDK5R1Q15078 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDK5R1Q15078 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDK5R1Q15078 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDK5R1Q15078 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDK5R1Q15078 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDK5R1Q15078 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5R1Q15078 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CDK5R1Q15078 AL161658.1-201ENST00000623641 1967 ntBASIC23.69■■□□□ 1.38
CDK5R1Q15078 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5R1Q15078 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDK5R1Q15078 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.67■■□□□ 1.38
CDK5R1Q15078 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDK5R1Q15078 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5R1Q15078 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5R1Q15078 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CDK5R1Q15078 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDK5R1Q15078 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5R1Q15078 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5R1Q15078 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDK5R1Q15078 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CDK5R1Q15078 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDK5R1Q15078 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDK5R1Q15078 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDK5R1Q15078 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.6■■□□□ 1.37
CDK5R1Q15078 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDK5R1Q15078 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CDK5R1Q15078 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDK5R1Q15078 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDK5R1Q15078 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDK5R1Q15078 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDK5R1Q15078 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.57■■□□□ 1.36
CDK5R1Q15078 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CDK5R1Q15078 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK5R1Q15078 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK5R1Q15078 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CDK5R1Q15078 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CDK5R1Q15078 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDK5R1Q15078 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
CDK5R1Q15078 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK5R1Q15078 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDK5R1Q15078 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CDK5R1Q15078 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDK5R1Q15078 DYNLL1-208ENST00000550178 581 ntBASIC23.53■■□□□ 1.36
CDK5R1Q15078 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDK5R1Q15078 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
CDK5R1Q15078 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDK5R1Q15078 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK5R1Q15078 AL135925.1-201ENST00000605920 1701 ntBASIC23.5■■□□□ 1.35
CDK5R1Q15078 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CDK5R1Q15078 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms