Protein–RNA interactions for Protein: P28221

HTR1D, 5-hydroxytryptamine receptor 1D, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1DP28221 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HTR1DP28221 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
HTR1DP28221 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTR1DP28221 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTR1DP28221 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HTR1DP28221 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.08■■□□□ 1.13
HTR1DP28221 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
HTR1DP28221 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HTR1DP28221 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTR1DP28221 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.07■■□□□ 1.12
HTR1DP28221 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HTR1DP28221 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HTR1DP28221 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HTR1DP28221 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
HTR1DP28221 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HTR1DP28221 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.05■■□□□ 1.12
HTR1DP28221 WASH5P-204ENST00000632292 975 ntBASIC22.05■■□□□ 1.12
HTR1DP28221 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
HTR1DP28221 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HTR1DP28221 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.03■■□□□ 1.12
HTR1DP28221 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HTR1DP28221 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HTR1DP28221 AL391121.1-201ENST00000607967 1349 ntBASIC22.01■■□□□ 1.11
HTR1DP28221 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HTR1DP28221 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HTR1DP28221 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HTR1DP28221 CAHM-201ENST00000604200 896 ntBASIC21.99■■□□□ 1.11
HTR1DP28221 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HTR1DP28221 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.97■■□□□ 1.11
HTR1DP28221 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HTR1DP28221 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.96■■□□□ 1.11
HTR1DP28221 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.96■■□□□ 1.11
HTR1DP28221 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTR1DP28221 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTR1DP28221 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
HTR1DP28221 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.95■■□□□ 1.1
HTR1DP28221 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1DP28221 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1DP28221 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1DP28221 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HTR1DP28221 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
HTR1DP28221 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTR1DP28221 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTR1DP28221 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HTR1DP28221 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HTR1DP28221 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.91■■□□□ 1.1
HTR1DP28221 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HTR1DP28221 SUZ12P1-203ENST00000578195 985 ntBASIC21.9■■□□□ 1.1
HTR1DP28221 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1DP28221 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1DP28221 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HTR1DP28221 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTR1DP28221 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTR1DP28221 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HTR1DP28221 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HTR1DP28221 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HTR1DP28221 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HTR1DP28221 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HTR1DP28221 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.85■■□□□ 1.09
HTR1DP28221 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
HTR1DP28221 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HTR1DP28221 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
HTR1DP28221 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.83■■□□□ 1.09
HTR1DP28221 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HTR1DP28221 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
HTR1DP28221 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
HTR1DP28221 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HTR1DP28221 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HTR1DP28221 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HTR1DP28221 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.81■■□□□ 1.08
HTR1DP28221 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.81■■□□□ 1.08
HTR1DP28221 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
HTR1DP28221 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.8■■□□□ 1.08
HTR1DP28221 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.8■■□□□ 1.08
HTR1DP28221 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.8■■□□□ 1.08
HTR1DP28221 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HTR1DP28221 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HTR1DP28221 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.78■■□□□ 1.08
HTR1DP28221 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HTR1DP28221 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HTR1DP28221 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.77■■□□□ 1.08
HTR1DP28221 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTR1DP28221 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR1DP28221 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR1DP28221 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR1DP28221 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HTR1DP28221 AL161658.1-201ENST00000623641 1967 ntBASIC21.75■■□□□ 1.07
HTR1DP28221 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HTR1DP28221 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
HTR1DP28221 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1DP28221 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.73■■□□□ 1.07
HTR1DP28221 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.73■■□□□ 1.07
HTR1DP28221 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1DP28221 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1DP28221 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.73■■□□□ 1.07
HTR1DP28221 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1DP28221 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.73■■□□□ 1.07
HTR1DP28221 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1DP28221 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
HTR1DP28221 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms