Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC120057.4-201ENST00000624722 1615 ntBASIC35.39■■■■□ 3.26
CHL1O00533 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
CHL1O00533 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.38■■■■□ 3.25
CHL1O00533 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CHL1O00533 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
CHL1O00533 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC35.35■■■■□ 3.25
CHL1O00533 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CHL1O00533 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CHL1O00533 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.32■■■■□ 3.24
CHL1O00533 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CHL1O00533 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC35.3■■■■□ 3.24
CHL1O00533 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CHL1O00533 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
CHL1O00533 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CHL1O00533 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CHL1O00533 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.24
CHL1O00533 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CHL1O00533 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC35.25■■■■□ 3.23
CHL1O00533 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CHL1O00533 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.24■■■■□ 3.23
CHL1O00533 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC35.23■■■■□ 3.23
CHL1O00533 HNRNPLP2-201ENST00000568980 1570 ntBASIC35.23■■■■□ 3.23
CHL1O00533 NRG1-221ENST00000614767 762 ntTSL 5 BASIC35.23■■■■□ 3.23
CHL1O00533 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
CHL1O00533 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC35.2■■■■□ 3.23
CHL1O00533 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CHL1O00533 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CHL1O00533 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
CHL1O00533 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC35.18■■■■□ 3.22
CHL1O00533 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC35.18■■■■□ 3.22
CHL1O00533 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
CHL1O00533 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC35.16■■■■□ 3.22
CHL1O00533 MIR762-201ENST00000390236 83 ntBASIC35.16■■■■□ 3.22
CHL1O00533 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC35.15■■■■□ 3.22
CHL1O00533 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CHL1O00533 AP006261.1-201ENST00000584783 668 ntBASIC35.14■■■■□ 3.22
CHL1O00533 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.14■■■■□ 3.22
CHL1O00533 AL162393.1-201ENST00000437852 946 ntBASIC35.12■■■■□ 3.21
CHL1O00533 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC35.11■■■■□ 3.21
CHL1O00533 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CHL1O00533 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
CHL1O00533 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
CHL1O00533 RPS2P35-201ENST00000443417 897 ntBASIC35.09■■■■□ 3.21
CHL1O00533 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC35.07■■■■□ 3.2
CHL1O00533 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.06■■■■□ 3.2
CHL1O00533 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
CHL1O00533 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CHL1O00533 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
CHL1O00533 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC35.03■■■■□ 3.2
CHL1O00533 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.03■■■■□ 3.2
CHL1O00533 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
CHL1O00533 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CHL1O00533 DUX4L28-201ENST00000623687 678 ntBASIC35.02■■■■□ 3.2
CHL1O00533 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.01■■■■□ 3.2
CHL1O00533 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.2
CHL1O00533 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
CHL1O00533 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC35■■■■□ 3.19
CHL1O00533 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC35■■■■□ 3.19
CHL1O00533 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CHL1O00533 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
CHL1O00533 MIR3665-201ENST00000578708 105 ntBASIC34.98■■■■□ 3.19
CHL1O00533 AC005559.1-201ENST00000589661 871 ntBASIC34.97■■■■□ 3.19
CHL1O00533 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
CHL1O00533 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC34.95■■■■□ 3.19
CHL1O00533 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
CHL1O00533 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CHL1O00533 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC34.93■■■■□ 3.18
CHL1O00533 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
CHL1O00533 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
CHL1O00533 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
CHL1O00533 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CHL1O00533 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CHL1O00533 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CHL1O00533 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CHL1O00533 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CHL1O00533 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC34.89■■■■□ 3.18
CHL1O00533 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CHL1O00533 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC34.89■■■■□ 3.18
CHL1O00533 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CHL1O00533 AC087741.3-201ENST00000624270 1347 ntBASIC34.88■■■■□ 3.17
CHL1O00533 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.87■■■■□ 3.17
CHL1O00533 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
CHL1O00533 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHL1O00533 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC34.83■■■■□ 3.17
CHL1O00533 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
CHL1O00533 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC34.81■■■■□ 3.16
CHL1O00533 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CHL1O00533 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC34.8■■■■□ 3.16
CHL1O00533 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CHL1O00533 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
CHL1O00533 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CHL1O00533 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHL1O00533 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHL1O00533 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHL1O00533 AL161658.1-201ENST00000623641 1967 ntBASIC34.76■■■■□ 3.16
CHL1O00533 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CHL1O00533 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC34.75■■■■□ 3.15
CHL1O00533 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CHL1O00533 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC34.74■■■■□ 3.15
CHL1O00533 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms