Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
IFRD1O00458 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
IFRD1O00458 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
IFRD1O00458 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
IFRD1O00458 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
IFRD1O00458 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.74■■□□□ 1.87
IFRD1O00458 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.74■■□□□ 1.87
IFRD1O00458 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
IFRD1O00458 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
IFRD1O00458 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.73■■□□□ 1.87
IFRD1O00458 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
IFRD1O00458 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
IFRD1O00458 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
IFRD1O00458 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.69■■□□□ 1.86
IFRD1O00458 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
IFRD1O00458 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
IFRD1O00458 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.68■■□□□ 1.86
IFRD1O00458 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
IFRD1O00458 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
IFRD1O00458 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.68■■□□□ 1.86
IFRD1O00458 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.67■■□□□ 1.86
IFRD1O00458 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
IFRD1O00458 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
IFRD1O00458 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
IFRD1O00458 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
IFRD1O00458 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
IFRD1O00458 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
IFRD1O00458 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
IFRD1O00458 AC120057.4-201ENST00000624722 1615 ntBASIC26.64■■□□□ 1.85
IFRD1O00458 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
IFRD1O00458 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
IFRD1O00458 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.63■■□□□ 1.85
IFRD1O00458 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.63■■□□□ 1.85
IFRD1O00458 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.61■■□□□ 1.85
IFRD1O00458 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.59■■□□□ 1.85
IFRD1O00458 AL391121.1-201ENST00000607967 1349 ntBASIC26.59■■□□□ 1.85
IFRD1O00458 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
IFRD1O00458 CAHM-201ENST00000604200 896 ntBASIC26.58■■□□□ 1.85
IFRD1O00458 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
IFRD1O00458 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
IFRD1O00458 WASH5P-204ENST00000632292 975 ntBASIC26.57■■□□□ 1.84
IFRD1O00458 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
IFRD1O00458 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.56■■□□□ 1.84
IFRD1O00458 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
IFRD1O00458 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
IFRD1O00458 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.53■■□□□ 1.84
IFRD1O00458 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
IFRD1O00458 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
IFRD1O00458 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
IFRD1O00458 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
IFRD1O00458 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
IFRD1O00458 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
IFRD1O00458 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.5■■□□□ 1.83
IFRD1O00458 SUZ12P1-203ENST00000578195 985 ntBASIC26.5■■□□□ 1.83
IFRD1O00458 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.5■■□□□ 1.83
IFRD1O00458 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFRD1O00458 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFRD1O00458 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFRD1O00458 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFRD1O00458 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.49■■□□□ 1.83
IFRD1O00458 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
IFRD1O00458 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.47■■□□□ 1.83
IFRD1O00458 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
IFRD1O00458 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
IFRD1O00458 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
IFRD1O00458 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.44■■□□□ 1.82
IFRD1O00458 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
IFRD1O00458 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
IFRD1O00458 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.43■■□□□ 1.82
IFRD1O00458 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
IFRD1O00458 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
IFRD1O00458 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
IFRD1O00458 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
IFRD1O00458 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.4■■□□□ 1.82
IFRD1O00458 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
IFRD1O00458 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
IFRD1O00458 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
IFRD1O00458 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IFRD1O00458 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IFRD1O00458 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
IFRD1O00458 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
IFRD1O00458 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFRD1O00458 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IFRD1O00458 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IFRD1O00458 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IFRD1O00458 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.31■■□□□ 1.8
IFRD1O00458 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
IFRD1O00458 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
IFRD1O00458 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
IFRD1O00458 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.27■■□□□ 1.8
IFRD1O00458 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
IFRD1O00458 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
IFRD1O00458 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.26■■□□□ 1.79
IFRD1O00458 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
IFRD1O00458 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFRD1O00458 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.24■■□□□ 1.79
IFRD1O00458 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
IFRD1O00458 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
IFRD1O00458 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
IFRD1O00458 MIR762-201ENST00000390236 83 ntBASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms