Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.68■■□□□ 1.86
SUPT3HB4E1H0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SUPT3HB4E1H0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.66■■□□□ 1.86
SUPT3HB4E1H0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SUPT3HB4E1H0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SUPT3HB4E1H0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SUPT3HB4E1H0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SUPT3HB4E1H0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SUPT3HB4E1H0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.62■■□□□ 1.85
SUPT3HB4E1H0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.61■■□□□ 1.85
SUPT3HB4E1H0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.61■■□□□ 1.85
SUPT3HB4E1H0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SUPT3HB4E1H0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.6■■□□□ 1.85
SUPT3HB4E1H0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
SUPT3HB4E1H0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SUPT3HB4E1H0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SUPT3HB4E1H0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.55■■□□□ 1.84
SUPT3HB4E1H0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
SUPT3HB4E1H0 ABCB10P1-201ENST00000614297 2181 ntBASIC26.52■■□□□ 1.84
SUPT3HB4E1H0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.84
SUPT3HB4E1H0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
SUPT3HB4E1H0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SUPT3HB4E1H0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.5■■□□□ 1.83
SUPT3HB4E1H0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.49■■□□□ 1.83
SUPT3HB4E1H0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.47■■□□□ 1.83
SUPT3HB4E1H0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SUPT3HB4E1H0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SUPT3HB4E1H0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SUPT3HB4E1H0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SUPT3HB4E1H0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.44■■□□□ 1.82
SUPT3HB4E1H0 AL161658.1-201ENST00000623641 1967 ntBASIC26.44■■□□□ 1.82
SUPT3HB4E1H0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SUPT3HB4E1H0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SUPT3HB4E1H0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SUPT3HB4E1H0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SUPT3HB4E1H0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SUPT3HB4E1H0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SUPT3HB4E1H0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SUPT3HB4E1H0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SUPT3HB4E1H0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
SUPT3HB4E1H0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.41■■□□□ 1.82
SUPT3HB4E1H0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.4■■□□□ 1.82
SUPT3HB4E1H0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.39■■□□□ 1.82
SUPT3HB4E1H0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SUPT3HB4E1H0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.38■■□□□ 1.81
SUPT3HB4E1H0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SUPT3HB4E1H0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.38■■□□□ 1.81
SUPT3HB4E1H0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SUPT3HB4E1H0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SUPT3HB4E1H0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SUPT3HB4E1H0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SUPT3HB4E1H0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SUPT3HB4E1H0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SUPT3HB4E1H0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
SUPT3HB4E1H0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.34■■□□□ 1.81
SUPT3HB4E1H0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SUPT3HB4E1H0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SUPT3HB4E1H0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SUPT3HB4E1H0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SUPT3HB4E1H0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SUPT3HB4E1H0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SUPT3HB4E1H0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SUPT3HB4E1H0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
SUPT3HB4E1H0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SUPT3HB4E1H0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SUPT3HB4E1H0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SUPT3HB4E1H0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
SUPT3HB4E1H0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.29■■□□□ 1.8
SUPT3HB4E1H0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.28■■□□□ 1.8
SUPT3HB4E1H0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SUPT3HB4E1H0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SUPT3HB4E1H0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SUPT3HB4E1H0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SUPT3HB4E1H0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SUPT3HB4E1H0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SUPT3HB4E1H0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
SUPT3HB4E1H0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SUPT3HB4E1H0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SUPT3HB4E1H0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SUPT3HB4E1H0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SUPT3HB4E1H0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SUPT3HB4E1H0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SUPT3HB4E1H0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.24■■□□□ 1.79
SUPT3HB4E1H0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SUPT3HB4E1H0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.23■■□□□ 1.79
SUPT3HB4E1H0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
SUPT3HB4E1H0 AL133380.1-201ENST00000506013 324 ntBASIC26.23■■□□□ 1.79
SUPT3HB4E1H0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SUPT3HB4E1H0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SUPT3HB4E1H0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SUPT3HB4E1H0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SUPT3HB4E1H0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SUPT3HB4E1H0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.21■■□□□ 1.79
SUPT3HB4E1H0 WASH5P-204ENST00000632292 975 ntBASIC26.21■■□□□ 1.79
SUPT3HB4E1H0 ABCB10P3-201ENST00000561950 2166 ntBASIC26.21■■□□□ 1.79
SUPT3HB4E1H0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SUPT3HB4E1H0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.2■■□□□ 1.78
SUPT3HB4E1H0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SUPT3HB4E1H0 ST7-AS1-201ENST00000456775 1889 ntBASIC26.18■■□□□ 1.78
SUPT3HB4E1H0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms