Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
SPDYE3A6NKU9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.1■■■□□ 2.57
SPDYE3A6NKU9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
SPDYE3A6NKU9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
SPDYE3A6NKU9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SPDYE3A6NKU9 AC120057.4-201ENST00000624722 1615 ntBASIC31.07■■■□□ 2.56
SPDYE3A6NKU9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SPDYE3A6NKU9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SPDYE3A6NKU9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SPDYE3A6NKU9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.06■■■□□ 2.56
SPDYE3A6NKU9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SPDYE3A6NKU9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
SPDYE3A6NKU9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SPDYE3A6NKU9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.02■■■□□ 2.56
SPDYE3A6NKU9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SPDYE3A6NKU9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SPDYE3A6NKU9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SPDYE3A6NKU9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
SPDYE3A6NKU9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
SPDYE3A6NKU9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SPDYE3A6NKU9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SPDYE3A6NKU9 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.95■■■□□ 2.54
SPDYE3A6NKU9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SPDYE3A6NKU9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.92■■■□□ 2.54
SPDYE3A6NKU9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.91■■■□□ 2.54
SPDYE3A6NKU9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SPDYE3A6NKU9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.9■■■□□ 2.54
SPDYE3A6NKU9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.89■■■□□ 2.54
SPDYE3A6NKU9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SPDYE3A6NKU9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SPDYE3A6NKU9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SPDYE3A6NKU9 AP006261.1-201ENST00000584783 668 ntBASIC30.87■■■□□ 2.53
SPDYE3A6NKU9 MIR762-201ENST00000390236 83 ntBASIC30.86■■■□□ 2.53
SPDYE3A6NKU9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SPDYE3A6NKU9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SPDYE3A6NKU9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
SPDYE3A6NKU9 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.84■■■□□ 2.53
SPDYE3A6NKU9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SPDYE3A6NKU9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SPDYE3A6NKU9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SPDYE3A6NKU9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPDYE3A6NKU9 AL162393.1-201ENST00000437852 946 ntBASIC30.78■■■□□ 2.52
SPDYE3A6NKU9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.78■■■□□ 2.52
SPDYE3A6NKU9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.78■■■□□ 2.52
SPDYE3A6NKU9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SPDYE3A6NKU9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SPDYE3A6NKU9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.77■■■□□ 2.52
SPDYE3A6NKU9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.76■■■□□ 2.51
SPDYE3A6NKU9 RPS2P35-201ENST00000443417 897 ntBASIC30.76■■■□□ 2.51
SPDYE3A6NKU9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SPDYE3A6NKU9 MIR3665-201ENST00000578708 105 ntBASIC30.75■■■□□ 2.51
SPDYE3A6NKU9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SPDYE3A6NKU9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SPDYE3A6NKU9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.74■■■□□ 2.51
SPDYE3A6NKU9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.74■■■□□ 2.51
SPDYE3A6NKU9 AC005559.1-201ENST00000589661 871 ntBASIC30.74■■■□□ 2.51
SPDYE3A6NKU9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SPDYE3A6NKU9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.73■■■□□ 2.51
SPDYE3A6NKU9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
SPDYE3A6NKU9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPDYE3A6NKU9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPDYE3A6NKU9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPDYE3A6NKU9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SPDYE3A6NKU9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SPDYE3A6NKU9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
SPDYE3A6NKU9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
SPDYE3A6NKU9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SPDYE3A6NKU9 DUX4L28-201ENST00000623687 678 ntBASIC30.69■■■□□ 2.5
SPDYE3A6NKU9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
SPDYE3A6NKU9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
SPDYE3A6NKU9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.68■■■□□ 2.5
SPDYE3A6NKU9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SPDYE3A6NKU9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SPDYE3A6NKU9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SPDYE3A6NKU9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SPDYE3A6NKU9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.64■■■□□ 2.5
SPDYE3A6NKU9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.64■■■□□ 2.5
SPDYE3A6NKU9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
SPDYE3A6NKU9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
SPDYE3A6NKU9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SPDYE3A6NKU9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SPDYE3A6NKU9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SPDYE3A6NKU9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SPDYE3A6NKU9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SPDYE3A6NKU9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SPDYE3A6NKU9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.59■■■□□ 2.49
SPDYE3A6NKU9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SPDYE3A6NKU9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SPDYE3A6NKU9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SPDYE3A6NKU9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SPDYE3A6NKU9 AC087741.3-201ENST00000624270 1347 ntBASIC30.56■■■□□ 2.48
SPDYE3A6NKU9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.56■■■□□ 2.48
SPDYE3A6NKU9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.55■■■□□ 2.48
SPDYE3A6NKU9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.55■■■□□ 2.48
SPDYE3A6NKU9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
SPDYE3A6NKU9 AL161658.1-201ENST00000623641 1967 ntBASIC30.55■■■□□ 2.48
SPDYE3A6NKU9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SPDYE3A6NKU9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
SPDYE3A6NKU9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SPDYE3A6NKU9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms