Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV25A0A0B4J276 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV25A0A0B4J276 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAV25A0A0B4J276 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRAV25A0A0B4J276 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV25A0A0B4J276 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV25A0A0B4J276 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV25A0A0B4J276 SUZ12P1-203ENST00000578195 985 ntBASIC20.39■□□□□ 0.85
TRAV25A0A0B4J276 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV25A0A0B4J276 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRAV25A0A0B4J276 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV25A0A0B4J276 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV25A0A0B4J276 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV25A0A0B4J276 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV25A0A0B4J276 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV25A0A0B4J276 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV25A0A0B4J276 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRAV25A0A0B4J276 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
TRAV25A0A0B4J276 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV25A0A0B4J276 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV25A0A0B4J276 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV25A0A0B4J276 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV25A0A0B4J276 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV25A0A0B4J276 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRAV25A0A0B4J276 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV25A0A0B4J276 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV25A0A0B4J276 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV25A0A0B4J276 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV25A0A0B4J276 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV25A0A0B4J276 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV25A0A0B4J276 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV25A0A0B4J276 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRAV25A0A0B4J276 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV25A0A0B4J276 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV25A0A0B4J276 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.25■□□□□ 0.83
TRAV25A0A0B4J276 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV25A0A0B4J276 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV25A0A0B4J276 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV25A0A0B4J276 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV25A0A0B4J276 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAV25A0A0B4J276 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRAV25A0A0B4J276 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.23■□□□□ 0.83
TRAV25A0A0B4J276 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV25A0A0B4J276 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV25A0A0B4J276 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV25A0A0B4J276 AP006261.1-201ENST00000584783 668 ntBASIC20.22■□□□□ 0.83
TRAV25A0A0B4J276 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV25A0A0B4J276 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TRAV25A0A0B4J276 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV25A0A0B4J276 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV25A0A0B4J276 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV25A0A0B4J276 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAV25A0A0B4J276 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV25A0A0B4J276 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRAV25A0A0B4J276 MIR762-201ENST00000390236 83 ntBASIC20.19■□□□□ 0.82
TRAV25A0A0B4J276 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV25A0A0B4J276 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV25A0A0B4J276 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV25A0A0B4J276 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
TRAV25A0A0B4J276 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRAV25A0A0B4J276 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV25A0A0B4J276 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
TRAV25A0A0B4J276 MIR3665-201ENST00000578708 105 ntBASIC20.15■□□□□ 0.82
TRAV25A0A0B4J276 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAV25A0A0B4J276 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV25A0A0B4J276 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV25A0A0B4J276 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV25A0A0B4J276 AC005559.1-201ENST00000589661 871 ntBASIC20.13■□□□□ 0.81
TRAV25A0A0B4J276 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV25A0A0B4J276 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRAV25A0A0B4J276 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRAV25A0A0B4J276 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV25A0A0B4J276 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV25A0A0B4J276 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV25A0A0B4J276 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV25A0A0B4J276 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV25A0A0B4J276 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV25A0A0B4J276 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV25A0A0B4J276 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV25A0A0B4J276 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV25A0A0B4J276 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV25A0A0B4J276 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRAV25A0A0B4J276 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAV25A0A0B4J276 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.08■□□□□ 0.8
TRAV25A0A0B4J276 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.08■□□□□ 0.8
TRAV25A0A0B4J276 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV25A0A0B4J276 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV25A0A0B4J276 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV25A0A0B4J276 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV25A0A0B4J276 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV25A0A0B4J276 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV25A0A0B4J276 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV25A0A0B4J276 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAV25A0A0B4J276 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV25A0A0B4J276 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAV25A0A0B4J276 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.06■□□□□ 0.8
TRAV25A0A0B4J276 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.06■□□□□ 0.8
TRAV25A0A0B4J276 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV25A0A0B4J276 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV25A0A0B4J276 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms