Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
TRAV20A0A0B4J274 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.73■■□□□ 1.23
TRAV20A0A0B4J274 MIR3665-201ENST00000578708 105 ntBASIC22.73■■□□□ 1.23
TRAV20A0A0B4J274 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV20A0A0B4J274 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.72■■□□□ 1.23
TRAV20A0A0B4J274 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.72■■□□□ 1.23
TRAV20A0A0B4J274 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.72■■□□□ 1.23
TRAV20A0A0B4J274 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV20A0A0B4J274 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV20A0A0B4J274 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV20A0A0B4J274 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.71■■□□□ 1.23
TRAV20A0A0B4J274 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TRAV20A0A0B4J274 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV20A0A0B4J274 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV20A0A0B4J274 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV20A0A0B4J274 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRAV20A0A0B4J274 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.67■■□□□ 1.22
TRAV20A0A0B4J274 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.66■■□□□ 1.22
TRAV20A0A0B4J274 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.66■■□□□ 1.22
TRAV20A0A0B4J274 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRAV20A0A0B4J274 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRAV20A0A0B4J274 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.64■■□□□ 1.21
TRAV20A0A0B4J274 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TRAV20A0A0B4J274 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV20A0A0B4J274 MIR762-201ENST00000390236 83 ntBASIC22.62■■□□□ 1.21
TRAV20A0A0B4J274 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.62■■□□□ 1.21
TRAV20A0A0B4J274 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV20A0A0B4J274 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV20A0A0B4J274 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV20A0A0B4J274 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TRAV20A0A0B4J274 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV20A0A0B4J274 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV20A0A0B4J274 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRAV20A0A0B4J274 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRAV20A0A0B4J274 AC005559.1-201ENST00000589661 871 ntBASIC22.58■■□□□ 1.21
TRAV20A0A0B4J274 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.58■■□□□ 1.21
TRAV20A0A0B4J274 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.58■■□□□ 1.21
TRAV20A0A0B4J274 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TRAV20A0A0B4J274 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.57■■□□□ 1.2
TRAV20A0A0B4J274 DUX4L28-201ENST00000623687 678 ntBASIC22.57■■□□□ 1.2
TRAV20A0A0B4J274 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV20A0A0B4J274 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV20A0A0B4J274 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV20A0A0B4J274 WASH5P-204ENST00000632292 975 ntBASIC22.56■■□□□ 1.2
TRAV20A0A0B4J274 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV20A0A0B4J274 AC087741.3-201ENST00000624270 1347 ntBASIC22.55■■□□□ 1.2
TRAV20A0A0B4J274 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.54■■□□□ 1.2
TRAV20A0A0B4J274 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV20A0A0B4J274 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV20A0A0B4J274 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAV20A0A0B4J274 AC044849.2-201ENST00000606596 710 ntBASIC22.53■■□□□ 1.2
TRAV20A0A0B4J274 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TRAV20A0A0B4J274 AC135731.1-201ENST00000569415 2548 ntBASIC22.52■■□□□ 1.19
TRAV20A0A0B4J274 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAV20A0A0B4J274 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.51■■□□□ 1.19
TRAV20A0A0B4J274 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV20A0A0B4J274 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV20A0A0B4J274 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV20A0A0B4J274 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV20A0A0B4J274 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAV20A0A0B4J274 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRAV20A0A0B4J274 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.46■■□□□ 1.19
TRAV20A0A0B4J274 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.46■■□□□ 1.19
TRAV20A0A0B4J274 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
TRAV20A0A0B4J274 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAV20A0A0B4J274 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TRAV20A0A0B4J274 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.45■■□□□ 1.19
TRAV20A0A0B4J274 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TRAV20A0A0B4J274 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRAV20A0A0B4J274 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRAV20A0A0B4J274 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAV20A0A0B4J274 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAV20A0A0B4J274 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAV20A0A0B4J274 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRAV20A0A0B4J274 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRAV20A0A0B4J274 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRAV20A0A0B4J274 ABHD17AP4-201ENST00000411545 909 ntBASIC22.41■■□□□ 1.18
TRAV20A0A0B4J274 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRAV20A0A0B4J274 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.4■■□□□ 1.18
TRAV20A0A0B4J274 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TRAV20A0A0B4J274 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
TRAV20A0A0B4J274 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.38■■□□□ 1.17
TRAV20A0A0B4J274 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.37■■□□□ 1.17
TRAV20A0A0B4J274 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
TRAV20A0A0B4J274 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.37■■□□□ 1.17
TRAV20A0A0B4J274 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV20A0A0B4J274 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV20A0A0B4J274 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV20A0A0B4J274 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.36■■□□□ 1.17
TRAV20A0A0B4J274 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV20A0A0B4J274 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.35■■□□□ 1.17
TRAV20A0A0B4J274 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
TRAV20A0A0B4J274 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV20A0A0B4J274 MIR7108-201ENST00000614319 87 ntBASIC22.34■■□□□ 1.17
TRAV20A0A0B4J274 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV20A0A0B4J274 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRAV20A0A0B4J274 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV20A0A0B4J274 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRAV20A0A0B4J274 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAV20A0A0B4J274 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms