Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 AL008628.1-201ENST00000564198 5187 ntBASIC12.94□□□□□ -0.34
MCF2LO15068 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MCF2LO15068 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
MCF2LO15068 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MCF2LO15068 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MCF2LO15068 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC12.94□□□□□ -0.34
MCF2LO15068 AC106872.9-201ENST00000512437 1393 ntBASIC12.94□□□□□ -0.34
MCF2LO15068 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MCF2LO15068 EEF2KMT-202ENST00000458008 2268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 FGD3-202ENST00000375482 3321 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 HERC2P10-201ENST00000570209 2393 ntBASIC12.93□□□□□ -0.34
MCF2LO15068 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC12.93□□□□□ -0.34
MCF2LO15068 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 SRP9P1-201ENST00000445874 261 ntBASIC12.93□□□□□ -0.34
MCF2LO15068 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 HIPK1-AS1-204ENST00000450706 2117 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 RN7SL452P-201ENST00000482923 291 ntBASIC12.93□□□□□ -0.34
MCF2LO15068 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC12.93□□□□□ -0.34
MCF2LO15068 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC12.93□□□□□ -0.34
MCF2LO15068 NUP210P2-201ENST00000510577 282 ntBASIC12.93□□□□□ -0.34
MCF2LO15068 AC099343.1-201ENST00000513481 609 ntBASIC12.93□□□□□ -0.34
MCF2LO15068 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
MCF2LO15068 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 AC127459.2-201ENST00000567395 932 ntTSL 3 BASIC12.93□□□□□ -0.34
MCF2LO15068 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC12.93□□□□□ -0.34
MCF2LO15068 SNORD55-201ENST00000581525 80 ntBASIC12.93□□□□□ -0.34
MCF2LO15068 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC12.93□□□□□ -0.34
MCF2LO15068 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC12.93□□□□□ -0.34
MCF2LO15068 AC004686.1-201ENST00000605113 538 ntBASIC12.93□□□□□ -0.34
MCF2LO15068 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 AL591643.1-201ENST00000561587 1900 ntBASIC12.93□□□□□ -0.34
MCF2LO15068 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 INVS-202ENST00000262457 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 SIGLEC6-206ENST00000436458 1713 ntTSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 PITX2-212ENST00000614423 1866 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 HYDIN-209ENST00000538248 3152 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
MCF2LO15068 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 AIPL1-203ENST00000381129 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MCF2LO15068 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
MCF2LO15068 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
MCF2LO15068 PAMR1-205ENST00000611014 2613 ntTSL 5 BASIC12.92□□□□□ -0.34
MCF2LO15068 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC12.92□□□□□ -0.34
MCF2LO15068 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 TSTA3-210ENST00000529064 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MCF2LO15068 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
MCF2LO15068 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC12.92□□□□□ -0.34
MCF2LO15068 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MCF2LO15068 CCL25-202ENST00000315626 450 ntTSL 2 BASIC12.92□□□□□ -0.34
MCF2LO15068 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms