RNA–Protein interactions for RNA: ENST00000543818.5

LRTM2-208, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LRTM2, Length 3,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-208ENST00000543818 NISCHQ9Y2I1 1504 aa24.17■■□□□ 1.46
LRTM2-208ENST00000543818 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
LRTM2-208ENST00000543818 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
LRTM2-208ENST00000543818 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
LRTM2-208ENST00000543818 ABCC9O60706 1549 aa20.42■□□□□ 0.86
LRTM2-208ENST00000543818 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
LRTM2-208ENST00000543818 PELP1Q8IZL8 1130 aaKnown RBP20.19■□□□□ 0.82
LRTM2-208ENST00000543818 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
LRTM2-208ENST00000543818 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
LRTM2-208ENST00000543818 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.79
LRTM2-208ENST00000543818 PCGF6Q9BYE7 350 aa19.95■□□□□ 0.78
LRTM2-208ENST00000543818 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
LRTM2-208ENST00000543818 HRCP23327 699 aa19.86■□□□□ 0.77
LRTM2-208ENST00000543818 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
LRTM2-208ENST00000543818 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
LRTM2-208ENST00000543818 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
LRTM2-208ENST00000543818 LOC105371045A0A1W2PR82 267 aa19.67■□□□□ 0.74
LRTM2-208ENST00000543818 MYT1Q01538 1121 aa19.66■□□□□ 0.74
LRTM2-208ENST00000543818 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
LRTM2-208ENST00000543818 TTBK1Q5TCY1 1321 aaPredicted RBP19.45■□□□□ 0.7
LRTM2-208ENST00000543818 RANGAP1P46060 587 aaPredicted RBP19.38■□□□□ 0.69
LRTM2-208ENST00000543818 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
LRTM2-208ENST00000543818 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
LRTM2-208ENST00000543818 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
LRTM2-208ENST00000543818 MYO15BQ96JP2 1530 aa19.14■□□□□ 0.66
LRTM2-208ENST00000543818 NACADO15069 1562 aa19.13■□□□□ 0.65
LRTM2-208ENST00000543818 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
LRTM2-208ENST00000543818 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
LRTM2-208ENST00000543818 ZEB1P37275 1124 aaPredicted RBP19.09■□□□□ 0.65
LRTM2-208ENST00000543818 UBTFP17480 764 aaKnown RBP19.08■□□□□ 0.65
LRTM2-208ENST00000543818 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
LRTM2-208ENST00000543818 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
LRTM2-208ENST00000543818 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
LRTM2-208ENST00000543818 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
LRTM2-208ENST00000543818 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
LRTM2-208ENST00000543818 WIZO95785 1651 aa18.74■□□□□ 0.59
LRTM2-208ENST00000543818 APLP2Q06481 763 aa18.71■□□□□ 0.59
LRTM2-208ENST00000543818 ATP1B4Q9UN42 357 aaPredicted RBP18.7■□□□□ 0.58
LRTM2-208ENST00000543818 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
LRTM2-208ENST00000543818 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.57
LRTM2-208ENST00000543818 ACIN1Q9UKV3 1341 aaKnown RBP18.62■□□□□ 0.57
LRTM2-208ENST00000543818 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
LRTM2-208ENST00000543818 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
LRTM2-208ENST00000543818 ABCC8Q09428 1581 aa18.49■□□□□ 0.55
LRTM2-208ENST00000543818 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
LRTM2-208ENST00000543818 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
LRTM2-208ENST00000543818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
LRTM2-208ENST00000543818 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
LRTM2-208ENST00000543818 DIEXFQ68CQ4 756 aaKnown RBP18.44■□□□□ 0.54
LRTM2-208ENST00000543818 ITGAEP38570 1179 aa18.41■□□□□ 0.54
LRTM2-208ENST00000543818 SOGA1O94964 1423 aa18.39■□□□□ 0.53
LRTM2-208ENST00000543818 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
LRTM2-208ENST00000543818 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
LRTM2-208ENST00000543818 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
LRTM2-208ENST00000543818 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
LRTM2-208ENST00000543818 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.52
LRTM2-208ENST00000543818 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
LRTM2-208ENST00000543818 FBLN2P98095 1184 aa18.25■□□□□ 0.51
LRTM2-208ENST00000543818 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
LRTM2-208ENST00000543818 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
LRTM2-208ENST00000543818 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
LRTM2-208ENST00000543818 UNC13AQ9UPW8 1703 aa18.16■□□□□ 0.5
LRTM2-208ENST00000543818 SMARCA2P51531 1590 aa18.16■□□□□ 0.5
LRTM2-208ENST00000543818 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
LRTM2-208ENST00000543818 CEP162Q5TB80 1403 aa18.09■□□□□ 0.49
LRTM2-208ENST00000543818 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
LRTM2-208ENST00000543818 FAM50AQ14320 339 aaKnown RBP17.99■□□□□ 0.47
LRTM2-208ENST00000543818 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
LRTM2-208ENST00000543818 CLIP1P30622 1438 aa17.98■□□□□ 0.47
LRTM2-208ENST00000543818 NEFLP07196 543 aa17.94■□□□□ 0.46
LRTM2-208ENST00000543818 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
LRTM2-208ENST00000543818 TNIKQ9UKE5 1360 aa17.93■□□□□ 0.46
LRTM2-208ENST00000543818 BCANQ96GW7 911 aa17.89■□□□□ 0.45
LRTM2-208ENST00000543818 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
LRTM2-208ENST00000543818 CUX2O14529 1486 aa17.87■□□□□ 0.45
LRTM2-208ENST00000543818 EEA1Q15075 1411 aa17.86■□□□□ 0.45
LRTM2-208ENST00000543818 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
LRTM2-208ENST00000543818 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
LRTM2-208ENST00000543818 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
LRTM2-208ENST00000543818 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
LRTM2-208ENST00000543818 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.45
LRTM2-208ENST00000543818 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
LRTM2-208ENST00000543818 ANP32EQ9BTT0 268 aa17.81■□□□□ 0.44
LRTM2-208ENST00000543818 NESP48681 1621 aa17.8■□□□□ 0.44
LRTM2-208ENST00000543818 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
LRTM2-208ENST00000543818 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.43
LRTM2-208ENST00000543818 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
LRTM2-208ENST00000543818 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
LRTM2-208ENST00000543818 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
LRTM2-208ENST00000543818 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
LRTM2-208ENST00000543818 MIER1Q8N108 512 aa17.67■□□□□ 0.42
LRTM2-208ENST00000543818 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
LRTM2-208ENST00000543818 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
LRTM2-208ENST00000543818 CFTRP13569 1480 aa17.63■□□□□ 0.41
LRTM2-208ENST00000543818 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
LRTM2-208ENST00000543818 CHIC2Q9UKJ5 165 aa17.62■□□□□ 0.41
LRTM2-208ENST00000543818 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
LRTM2-208ENST00000543818 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
LRTM2-208ENST00000543818 CUX1P39880 1505 aa17.58■□□□□ 0.41
LRTM2-208ENST00000543818 IGF1RP08069 1367 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms