RNA–Protein interactions for RNA: ENST00000503823.5

SLIT2-202, Transcript of slit guidance ligand 2, humanhuman

TSL 1 (best) BASIC

Gene SLIT2, Length 5,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-202ENST00000503823 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
SLIT2-202ENST00000503823 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
SLIT2-202ENST00000503823 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
SLIT2-202ENST00000503823 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
SLIT2-202ENST00000503823 ABCC9O60706 1549 aa20.09■□□□□ 0.81
SLIT2-202ENST00000503823 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
SLIT2-202ENST00000503823 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
SLIT2-202ENST00000503823 FAM9AQ8IZU1 332 aaPredicted RBP19.7■□□□□ 0.74
SLIT2-202ENST00000503823 RANGAP1P46060 587 aaPredicted RBP19.42■□□□□ 0.7
SLIT2-202ENST00000503823 APLP2Q06481 763 aa19.41■□□□□ 0.7
SLIT2-202ENST00000503823 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
SLIT2-202ENST00000503823 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
SLIT2-202ENST00000503823 TTBK1Q5TCY1 1321 aaPredicted RBP19.09■□□□□ 0.65
SLIT2-202ENST00000503823 UBTFP17480 764 aaKnown RBP19.06■□□□□ 0.64
SLIT2-202ENST00000503823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
SLIT2-202ENST00000503823 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
SLIT2-202ENST00000503823 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
SLIT2-202ENST00000503823 MYT1LQ9UL68 1186 aa18.78■□□□□ 0.6
SLIT2-202ENST00000503823 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
SLIT2-202ENST00000503823 FBLN2P98095 1184 aa18.76■□□□□ 0.59
SLIT2-202ENST00000503823 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
SLIT2-202ENST00000503823 PELP1Q8IZL8 1130 aaKnown RBP18.68■□□□□ 0.58
SLIT2-202ENST00000503823 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
SLIT2-202ENST00000503823 NACADO15069 1562 aa18.4■□□□□ 0.54
SLIT2-202ENST00000503823 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
SLIT2-202ENST00000503823 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
SLIT2-202ENST00000503823 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
SLIT2-202ENST00000503823 ITGAEP38570 1179 aa18.28■□□□□ 0.52
SLIT2-202ENST00000503823 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
SLIT2-202ENST00000503823 LOC105371045A0A1W2PR82 267 aa18.14■□□□□ 0.49
SLIT2-202ENST00000503823 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
SLIT2-202ENST00000503823 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.49
SLIT2-202ENST00000503823 P3H3Q8IVL6 736 aa18.09■□□□□ 0.49
SLIT2-202ENST00000503823 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
SLIT2-202ENST00000503823 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
SLIT2-202ENST00000503823 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
SLIT2-202ENST00000503823 BAZ1BQ9UIG0 1483 aaKnown RBP18.01■□□□□ 0.47
SLIT2-202ENST00000503823 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
SLIT2-202ENST00000503823 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.47
SLIT2-202ENST00000503823 MYT1Q01538 1121 aa17.95■□□□□ 0.46
SLIT2-202ENST00000503823 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
SLIT2-202ENST00000503823 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
SLIT2-202ENST00000503823 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
SLIT2-202ENST00000503823 ZNF777Q9ULD5 760 aaPredicted RBP17.84■□□□□ 0.45
SLIT2-202ENST00000503823 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
SLIT2-202ENST00000503823 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
SLIT2-202ENST00000503823 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
SLIT2-202ENST00000503823 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
SLIT2-202ENST00000503823 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
SLIT2-202ENST00000503823 DCAF1Q9Y4B6 1507 aa17.78■□□□□ 0.44
SLIT2-202ENST00000503823 BCANQ96GW7 911 aa17.75■□□□□ 0.43
SLIT2-202ENST00000503823 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
SLIT2-202ENST00000503823 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
SLIT2-202ENST00000503823 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
SLIT2-202ENST00000503823 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
SLIT2-202ENST00000503823 NEFLP07196 543 aa17.71■□□□□ 0.43
SLIT2-202ENST00000503823 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
SLIT2-202ENST00000503823 TRIM26Q12899 539 aaPredicted RBP17.63■□□□□ 0.41
SLIT2-202ENST00000503823 KCNH8Q96L42 1107 aa17.6■□□□□ 0.41
SLIT2-202ENST00000503823 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
SLIT2-202ENST00000503823 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
SLIT2-202ENST00000503823 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
SLIT2-202ENST00000503823 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
SLIT2-202ENST00000503823 ZNF326Q5BKZ1 582 aaKnown RBP17.5■□□□□ 0.39
SLIT2-202ENST00000503823 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
SLIT2-202ENST00000503823 MYO15BQ96JP2 1530 aa17.48■□□□□ 0.39
SLIT2-202ENST00000503823 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.39
SLIT2-202ENST00000503823 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
SLIT2-202ENST00000503823 ARID4BQ4LE39 1312 aaPredicted RBP17.43■□□□□ 0.38
SLIT2-202ENST00000503823 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
SLIT2-202ENST00000503823 PLEKHD1A6NEE1 506 aa17.41■□□□□ 0.38
SLIT2-202ENST00000503823 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
SLIT2-202ENST00000503823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
SLIT2-202ENST00000503823 TSPY4P0CV99 314 aa17.34■□□□□ 0.37
SLIT2-202ENST00000503823 TSPY10P0CW01 314 aa17.34■□□□□ 0.37
SLIT2-202ENST00000503823 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
SLIT2-202ENST00000503823 MTUS2Q5JR59 1369 aa17.32■□□□□ 0.36
SLIT2-202ENST00000503823 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
SLIT2-202ENST00000503823 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
SLIT2-202ENST00000503823 CUX2O14529 1486 aa17.3■□□□□ 0.36
SLIT2-202ENST00000503823 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
SLIT2-202ENST00000503823 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
SLIT2-202ENST00000503823 SOGA1O94964 1423 aa17.28■□□□□ 0.36
SLIT2-202ENST00000503823 HRCP23327 699 aa17.28■□□□□ 0.36
SLIT2-202ENST00000503823 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
SLIT2-202ENST00000503823 DAXXQ9UER7 740 aaPredicted RBP17.27■□□□□ 0.35
SLIT2-202ENST00000503823 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
SLIT2-202ENST00000503823 CARMIL1Q5VZK9 1371 aa17.19■□□□□ 0.34
SLIT2-202ENST00000503823 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
SLIT2-202ENST00000503823 CLIP1P30622 1438 aa17.18■□□□□ 0.34
SLIT2-202ENST00000503823 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
SLIT2-202ENST00000503823 EEA1Q15075 1411 aa17.16■□□□□ 0.34
SLIT2-202ENST00000503823 WIZO95785 1651 aa17.15■□□□□ 0.34
SLIT2-202ENST00000503823 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
SLIT2-202ENST00000503823 CYB5RLQ6IPT4 315 aa17.14■□□□□ 0.33
SLIT2-202ENST00000503823 CFDP1Q9UEE9 299 aaPredicted RBP17.13■□□□□ 0.33
SLIT2-202ENST00000503823 FANCD2Q9BXW9 1451 aa17.13■□□□□ 0.33
SLIT2-202ENST00000503823 TOP2AP11388 1531 aaKnown RBP17.13■□□□□ 0.33
SLIT2-202ENST00000503823 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
SLIT2-202ENST00000503823 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms