RNA–Protein interactions for RNA: ENST00000315626.5

CCL25-202, Transcript of C-C motif chemokine ligand 25, humanhuman

TSL 2 BASIC

Gene CCL25, Length 450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL25-202ENST00000315626 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
CCL25-202ENST00000315626 ABCC9O60706 1549 aa29.6■■■□□ 2.33
CCL25-202ENST00000315626 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.19
CCL25-202ENST00000315626 DNAJC5BQ9UF47 199 aa28.52■■■□□ 2.16
CCL25-202ENST00000315626 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
CCL25-202ENST00000315626 PABPN1Q86U42 306 aaKnown RBP eCLIP27.54■■■□□ 2
CCL25-202ENST00000315626 NACADO15069 1562 aa27.37■■□□□ 1.97
CCL25-202ENST00000315626 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
CCL25-202ENST00000315626 UNC13AQ9UPW8 1703 aa27.1■■□□□ 1.93
CCL25-202ENST00000315626 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.91
CCL25-202ENST00000315626 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
CCL25-202ENST00000315626 CECR2Q9BXF3 1484 aa26.7■■□□□ 1.87
CCL25-202ENST00000315626 DNAJC5Q9H3Z4 198 aa26.64■■□□□ 1.86
CCL25-202ENST00000315626 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
CCL25-202ENST00000315626 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
CCL25-202ENST00000315626 EIF4G1Q04637 1599 aaKnown RBP26.39■■□□□ 1.82
CCL25-202ENST00000315626 SCRIBQ14160 1630 aa26.23■■□□□ 1.79
CCL25-202ENST00000315626 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
CCL25-202ENST00000315626 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
CCL25-202ENST00000315626 CUX2O14529 1486 aa25.7■■□□□ 1.7
CCL25-202ENST00000315626 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
CCL25-202ENST00000315626 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
CCL25-202ENST00000315626 NESP48681 1621 aa25.23■■□□□ 1.63
CCL25-202ENST00000315626 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
CCL25-202ENST00000315626 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
CCL25-202ENST00000315626 HMGXB3Q12766 1538 aa25.01■■□□□ 1.59
CCL25-202ENST00000315626 THOC2Q8NI27 1593 aaKnown RBP25■■□□□ 1.59
CCL25-202ENST00000315626 SMARCA2P51531 1590 aa24.99■■□□□ 1.59
CCL25-202ENST00000315626 SMARCA4P51532 1647 aa24.91■■□□□ 1.58
CCL25-202ENST00000315626 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
CCL25-202ENST00000315626 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
CCL25-202ENST00000315626 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
CCL25-202ENST00000315626 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
CCL25-202ENST00000315626 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
CCL25-202ENST00000315626 PEG3Q9GZU2 1588 aa24.64■■□□□ 1.54
CCL25-202ENST00000315626 MRC2Q9UBG0 1479 aa24.57■■□□□ 1.52
CCL25-202ENST00000315626 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
CCL25-202ENST00000315626 OSCARQ8IYS5 282 aa24.53■■□□□ 1.52
CCL25-202ENST00000315626 MROH2BQ7Z745 1585 aa24.52■■□□□ 1.52
CCL25-202ENST00000315626 WDR62O43379 1518 aa24.51■■□□□ 1.51
CCL25-202ENST00000315626 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
CCL25-202ENST00000315626 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
CCL25-202ENST00000315626 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
CCL25-202ENST00000315626 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
CCL25-202ENST00000315626 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
CCL25-202ENST00000315626 WIZO95785 1651 aa24.17■■□□□ 1.46
CCL25-202ENST00000315626 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
CCL25-202ENST00000315626 CFTRP13569 1480 aa24.1■■□□□ 1.45
CCL25-202ENST00000315626 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
CCL25-202ENST00000315626 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
CCL25-202ENST00000315626 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
CCL25-202ENST00000315626 ZNF608Q9ULD9 1512 aaPredicted RBP23.98■■□□□ 1.43
CCL25-202ENST00000315626 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
CCL25-202ENST00000315626 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
CCL25-202ENST00000315626 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
CCL25-202ENST00000315626 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
CCL25-202ENST00000315626 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
CCL25-202ENST00000315626 FBLN2P98095 1184 aa23.72■■□□□ 1.39
CCL25-202ENST00000315626 TOPBP1Q92547 1522 aa23.72■■□□□ 1.39
CCL25-202ENST00000315626 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
CCL25-202ENST00000315626 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.38
CCL25-202ENST00000315626 CHD1O14646 1710 aa23.67■■□□□ 1.38
CCL25-202ENST00000315626 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
CCL25-202ENST00000315626 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
CCL25-202ENST00000315626 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
CCL25-202ENST00000315626 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
CCL25-202ENST00000315626 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
CCL25-202ENST00000315626 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
CCL25-202ENST00000315626 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
CCL25-202ENST00000315626 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
CCL25-202ENST00000315626 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
CCL25-202ENST00000315626 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
CCL25-202ENST00000315626 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
CCL25-202ENST00000315626 SOGA1O94964 1423 aa23.35■■□□□ 1.33
CCL25-202ENST00000315626 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
CCL25-202ENST00000315626 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
CCL25-202ENST00000315626 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
CCL25-202ENST00000315626 SYNJ2O15056 1496 aa23.18■■□□□ 1.3
CCL25-202ENST00000315626 FGD5Q6ZNL6 1462 aa23.18■■□□□ 1.3
CCL25-202ENST00000315626 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
CCL25-202ENST00000315626 WDR97A6NE52 1622 aa23.14■■□□□ 1.29
CCL25-202ENST00000315626 CUX1P39880 1505 aa23.06■■□□□ 1.28
CCL25-202ENST00000315626 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
CCL25-202ENST00000315626 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
CCL25-202ENST00000315626 CEP170Q5SW79 1584 aa22.9■■□□□ 1.26
CCL25-202ENST00000315626 ILDR1Q86SU0 546 aaPredicted RBP22.89■■□□□ 1.25
CCL25-202ENST00000315626 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
CCL25-202ENST00000315626 KIF13AQ9H1H9 1805 aa22.87■■□□□ 1.25
CCL25-202ENST00000315626 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
CCL25-202ENST00000315626 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
CCL25-202ENST00000315626 NUP160Q12769 1436 aa22.83■■□□□ 1.25
CCL25-202ENST00000315626 KDM4FA0A1W2PPD8 638 aa22.83■■□□□ 1.25
CCL25-202ENST00000315626 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
CCL25-202ENST00000315626 SHROOM2Q13796 1616 aa22.76■■□□□ 1.23
CCL25-202ENST00000315626 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
CCL25-202ENST00000315626 PRG4Q92954 1404 aaPredicted RBP22.73■■□□□ 1.23
CCL25-202ENST00000315626 ABCC10Q5T3U5 1492 aa22.71■■□□□ 1.23
CCL25-202ENST00000315626 FHAD1B1AJZ9 1412 aa22.69■■□□□ 1.22
CCL25-202ENST00000315626 JPH4Q96JJ6 628 aa22.69■■□□□ 1.22
CCL25-202ENST00000315626 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms