RNA–Protein interactions for RNA: ENST00000524308.5

MATN2-218, Transcript of matrilin 2, humanhuman

TSL 1 (best) BASIC

Gene MATN2, Length 3,449 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2-218ENST00000524308 NISCHQ9Y2I1 1504 aa24.48■■□□□ 1.51
MATN2-218ENST00000524308 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
MATN2-218ENST00000524308 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
MATN2-218ENST00000524308 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
MATN2-218ENST00000524308 HRCP23327 699 aa20.92■□□□□ 0.94
MATN2-218ENST00000524308 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
MATN2-218ENST00000524308 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
MATN2-218ENST00000524308 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
MATN2-218ENST00000524308 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
MATN2-218ENST00000524308 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
MATN2-218ENST00000524308 LOC105371045A0A1W2PR82 267 aa20.55■□□□□ 0.88
MATN2-218ENST00000524308 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.84
MATN2-218ENST00000524308 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
MATN2-218ENST00000524308 TRIM26Q12899 539 aaPredicted RBP20.07■□□□□ 0.8
MATN2-218ENST00000524308 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
MATN2-218ENST00000524308 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
MATN2-218ENST00000524308 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
MATN2-218ENST00000524308 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
MATN2-218ENST00000524308 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
MATN2-218ENST00000524308 ABCC9O60706 1549 aa19.66■□□□□ 0.74
MATN2-218ENST00000524308 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
MATN2-218ENST00000524308 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
MATN2-218ENST00000524308 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
MATN2-218ENST00000524308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
MATN2-218ENST00000524308 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
MATN2-218ENST00000524308 CECR2Q9BXF3 1484 aa19.34■□□□□ 0.69
MATN2-218ENST00000524308 NEUROD1Q13562 356 aa19.32■□□□□ 0.68
MATN2-218ENST00000524308 CCER1Q8TC90 406 aaPredicted RBP19.31■□□□□ 0.68
MATN2-218ENST00000524308 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
MATN2-218ENST00000524308 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
MATN2-218ENST00000524308 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
MATN2-218ENST00000524308 WIZO95785 1651 aa19.16■□□□□ 0.66
MATN2-218ENST00000524308 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
MATN2-218ENST00000524308 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.65
MATN2-218ENST00000524308 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
MATN2-218ENST00000524308 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
MATN2-218ENST00000524308 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
MATN2-218ENST00000524308 CENPBP07199 599 aaPredicted RBP18.91■□□□□ 0.62
MATN2-218ENST00000524308 SOGA1O94964 1423 aa18.91■□□□□ 0.62
MATN2-218ENST00000524308 CEP162Q5TB80 1403 aa18.89■□□□□ 0.61
MATN2-218ENST00000524308 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
MATN2-218ENST00000524308 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
MATN2-218ENST00000524308 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
MATN2-218ENST00000524308 UBTFP17480 764 aaKnown RBP18.84■□□□□ 0.61
MATN2-218ENST00000524308 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
MATN2-218ENST00000524308 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
MATN2-218ENST00000524308 NACADO15069 1562 aa18.78■□□□□ 0.6
MATN2-218ENST00000524308 MIER1Q8N108 512 aa18.77■□□□□ 0.6
MATN2-218ENST00000524308 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
MATN2-218ENST00000524308 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
MATN2-218ENST00000524308 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
MATN2-218ENST00000524308 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
MATN2-218ENST00000524308 SMARCA2P51531 1590 aa18.64■□□□□ 0.57
MATN2-218ENST00000524308 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
MATN2-218ENST00000524308 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
MATN2-218ENST00000524308 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
MATN2-218ENST00000524308 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
MATN2-218ENST00000524308 CLIP1P30622 1438 aa18.43■□□□□ 0.54
MATN2-218ENST00000524308 EEA1Q15075 1411 aa18.42■□□□□ 0.54
MATN2-218ENST00000524308 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
MATN2-218ENST00000524308 RAPGEF2Q9Y4G8 1499 aa18.35■□□□□ 0.53
MATN2-218ENST00000524308 APLP2Q06481 763 aa18.35■□□□□ 0.53
MATN2-218ENST00000524308 UNC13AQ9UPW8 1703 aa18.34■□□□□ 0.53
MATN2-218ENST00000524308 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.52
MATN2-218ENST00000524308 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
MATN2-218ENST00000524308 MYT1Q01538 1121 aa18.29■□□□□ 0.52
MATN2-218ENST00000524308 SUPT16HQ9Y5B9 1047 aaKnown RBP18.27■□□□□ 0.52
MATN2-218ENST00000524308 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.51
MATN2-218ENST00000524308 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
MATN2-218ENST00000524308 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
MATN2-218ENST00000524308 KIF21BO75037 1637 aa18.24■□□□□ 0.51
MATN2-218ENST00000524308 ITGAEP38570 1179 aa18.22■□□□□ 0.51
MATN2-218ENST00000524308 BCANQ96GW7 911 aa18.12■□□□□ 0.49
MATN2-218ENST00000524308 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
MATN2-218ENST00000524308 TSHZ2Q9NRE2 1034 aa18.1■□□□□ 0.49
MATN2-218ENST00000524308 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
MATN2-218ENST00000524308 ARAP1Q96P48 1450 aa18.08■□□□□ 0.48
MATN2-218ENST00000524308 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
MATN2-218ENST00000524308 HIRIP3Q9BW71 556 aaPredicted RBP18■□□□□ 0.47
MATN2-218ENST00000524308 PEG3Q9GZU2 1588 aa17.99■□□□□ 0.47
MATN2-218ENST00000524308 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
MATN2-218ENST00000524308 DDX10Q13206 875 aaKnown RBP17.95■□□□□ 0.46
MATN2-218ENST00000524308 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
MATN2-218ENST00000524308 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
MATN2-218ENST00000524308 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
MATN2-218ENST00000524308 CCNB3Q8WWL7 1395 aa17.92■□□□□ 0.46
MATN2-218ENST00000524308 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
MATN2-218ENST00000524308 FKBP8Q14318 412 aa17.91■□□□□ 0.46
MATN2-218ENST00000524308 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
MATN2-218ENST00000524308 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
MATN2-218ENST00000524308 TRIM52Q96A61 297 aa17.85■□□□□ 0.45
MATN2-218ENST00000524308 ARHGAP35Q9NRY4 1499 aa17.85■□□□□ 0.45
MATN2-218ENST00000524308 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
MATN2-218ENST00000524308 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.44
MATN2-218ENST00000524308 CUX1P39880 1505 aa17.82■□□□□ 0.44
MATN2-218ENST00000524308 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
MATN2-218ENST00000524308 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
MATN2-218ENST00000524308 P3H3Q8IVL6 736 aa17.81■□□□□ 0.44
MATN2-218ENST00000524308 BIVM-ERCC5R4GMW8 1640 aa17.8■□□□□ 0.44
MATN2-218ENST00000524308 CUX2O14529 1486 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms