RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 NISCHQ9Y2I1 1504 aa21.42■■□□□ 1.02
PRKAR1A-217ENST00000589228 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.98
PRKAR1A-217ENST00000589228 SUPT5HO00267 1087 aaKnown RBP20.63■□□□□ 0.89
PRKAR1A-217ENST00000589228 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
PRKAR1A-217ENST00000589228 EHMT2Q96KQ7 1210 aa19.78■□□□□ 0.76
PRKAR1A-217ENST00000589228 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
PRKAR1A-217ENST00000589228 FAM9AQ8IZU1 332 aaPredicted RBP19.39■□□□□ 0.69
PRKAR1A-217ENST00000589228 TTBK1Q5TCY1 1321 aaPredicted RBP19.09■□□□□ 0.65
PRKAR1A-217ENST00000589228 TRIM41Q8WV44 630 aa18.97■□□□□ 0.63
PRKAR1A-217ENST00000589228 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
PRKAR1A-217ENST00000589228 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
PRKAR1A-217ENST00000589228 PPARGC1BQ86YN6 1023 aaKnown RBP18.75■□□□□ 0.59
PRKAR1A-217ENST00000589228 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
PRKAR1A-217ENST00000589228 APLP2Q06481 763 aa18.74■□□□□ 0.59
PRKAR1A-217ENST00000589228 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
PRKAR1A-217ENST00000589228 HRCP23327 699 aa18.61■□□□□ 0.57
PRKAR1A-217ENST00000589228 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
PRKAR1A-217ENST00000589228 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
PRKAR1A-217ENST00000589228 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
PRKAR1A-217ENST00000589228 CENPBP07199 599 aaPredicted RBP18.29■□□□□ 0.52
PRKAR1A-217ENST00000589228 ATP1B4Q9UN42 357 aaPredicted RBP18.27■□□□□ 0.52
PRKAR1A-217ENST00000589228 YTHDC1Q96MU7 727 aaKnown RBP18.26■□□□□ 0.51
PRKAR1A-217ENST00000589228 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
PRKAR1A-217ENST00000589228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
PRKAR1A-217ENST00000589228 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
PRKAR1A-217ENST00000589228 ABCC9O60706 1549 aa18.02■□□□□ 0.47
PRKAR1A-217ENST00000589228 ITGAEP38570 1179 aa18.01■□□□□ 0.47
PRKAR1A-217ENST00000589228 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
PRKAR1A-217ENST00000589228 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
PRKAR1A-217ENST00000589228 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
PRKAR1A-217ENST00000589228 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
PRKAR1A-217ENST00000589228 NEFLP07196 543 aa17.65■□□□□ 0.42
PRKAR1A-217ENST00000589228 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
PRKAR1A-217ENST00000589228 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
PRKAR1A-217ENST00000589228 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
PRKAR1A-217ENST00000589228 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
PRKAR1A-217ENST00000589228 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
PRKAR1A-217ENST00000589228 FAM50AQ14320 339 aaKnown RBP17.49■□□□□ 0.39
PRKAR1A-217ENST00000589228 POLR3GLQ9BT43 218 aa17.49■□□□□ 0.39
PRKAR1A-217ENST00000589228 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
PRKAR1A-217ENST00000589228 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
PRKAR1A-217ENST00000589228 ZNF316A6NFI3 1004 aaPredicted RBP17.41■□□□□ 0.38
PRKAR1A-217ENST00000589228 P3H3Q8IVL6 736 aa17.34■□□□□ 0.37
PRKAR1A-217ENST00000589228 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.37
PRKAR1A-217ENST00000589228 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
PRKAR1A-217ENST00000589228 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
PRKAR1A-217ENST00000589228 BCANQ96GW7 911 aa17.28■□□□□ 0.36
PRKAR1A-217ENST00000589228 TRIM52Q96A61 297 aa17.24■□□□□ 0.35
PRKAR1A-217ENST00000589228 MYT1Q01538 1121 aa17.19■□□□□ 0.34
PRKAR1A-217ENST00000589228 ARID3CA6NKF2 412 aa17.18■□□□□ 0.34
PRKAR1A-217ENST00000589228 MYT1LQ9UL68 1186 aa17.15■□□□□ 0.34
PRKAR1A-217ENST00000589228 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
PRKAR1A-217ENST00000589228 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
PRKAR1A-217ENST00000589228 ANP32CO43423 234 aa17.07■□□□□ 0.32
PRKAR1A-217ENST00000589228 MIER1Q8N108 512 aa17.02■□□□□ 0.32
PRKAR1A-217ENST00000589228 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
PRKAR1A-217ENST00000589228 FBLN2P98095 1184 aa17.01■□□□□ 0.31
PRKAR1A-217ENST00000589228 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
PRKAR1A-217ENST00000589228 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
PRKAR1A-217ENST00000589228 CLIP1P30622 1438 aa16.95■□□□□ 0.3
PRKAR1A-217ENST00000589228 HIRIP3Q9BW71 556 aaPredicted RBP16.92■□□□□ 0.3
PRKAR1A-217ENST00000589228 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
PRKAR1A-217ENST00000589228 ZNF777Q9ULD5 760 aaPredicted RBP16.86■□□□□ 0.29
PRKAR1A-217ENST00000589228 FKBP8Q14318 412 aa16.85■□□□□ 0.29
PRKAR1A-217ENST00000589228 CHIC2Q9UKJ5 165 aa16.85■□□□□ 0.29
PRKAR1A-217ENST00000589228 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.29
PRKAR1A-217ENST00000589228 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.28
PRKAR1A-217ENST00000589228 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
PRKAR1A-217ENST00000589228 SOGA1O94964 1423 aa16.81■□□□□ 0.28
PRKAR1A-217ENST00000589228 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
PRKAR1A-217ENST00000589228 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
PRKAR1A-217ENST00000589228 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
PRKAR1A-217ENST00000589228 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.27
PRKAR1A-217ENST00000589228 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
PRKAR1A-217ENST00000589228 MROH2BQ7Z745 1585 aa16.75■□□□□ 0.27
PRKAR1A-217ENST00000589228 NACADO15069 1562 aa16.75■□□□□ 0.27
PRKAR1A-217ENST00000589228 EEA1Q15075 1411 aa16.74■□□□□ 0.27
PRKAR1A-217ENST00000589228 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
PRKAR1A-217ENST00000589228 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
PRKAR1A-217ENST00000589228 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
PRKAR1A-217ENST00000589228 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
PRKAR1A-217ENST00000589228 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
PRKAR1A-217ENST00000589228 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
PRKAR1A-217ENST00000589228 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
PRKAR1A-217ENST00000589228 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
PRKAR1A-217ENST00000589228 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
PRKAR1A-217ENST00000589228 SIN3AQ96ST3 1273 aa16.63■□□□□ 0.25
PRKAR1A-217ENST00000589228 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
PRKAR1A-217ENST00000589228 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
PRKAR1A-217ENST00000589228 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
PRKAR1A-217ENST00000589228 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
PRKAR1A-217ENST00000589228 KANK4Q5T7N3 995 aaPredicted RBP16.55■□□□□ 0.24
PRKAR1A-217ENST00000589228 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
PRKAR1A-217ENST00000589228 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
PRKAR1A-217ENST00000589228 KDM2AQ9Y2K7 1162 aa16.53■□□□□ 0.24
PRKAR1A-217ENST00000589228 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
PRKAR1A-217ENST00000589228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.231e-11■□□□□ 9.1
PRKAR1A-217ENST00000589228 WIZO95785 1651 aa16.49■□□□□ 0.23
PRKAR1A-217ENST00000589228 EIF4G2P78344 907 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRKAR1A-217ENST00000589228 TMC1Q8TDI8 760 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms