RNA–Protein interactions for RNA: ENST00000375482.7

FGD3-202, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGD3, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-202ENST00000375482 NISCHQ9Y2I1 1504 aa25.76■■□□□ 1.71
FGD3-202ENST00000375482 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
FGD3-202ENST00000375482 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
FGD3-202ENST00000375482 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
FGD3-202ENST00000375482 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.06
FGD3-202ENST00000375482 CCDC180Q9P1Z9 1646 aa21.64■■□□□ 1.05
FGD3-202ENST00000375482 ABCC9O60706 1549 aa21.18■□□□□ 0.98
FGD3-202ENST00000375482 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
FGD3-202ENST00000375482 SCRIBQ14160 1630 aa20.89■□□□□ 0.94
FGD3-202ENST00000375482 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
FGD3-202ENST00000375482 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
FGD3-202ENST00000375482 MYO15BQ96JP2 1530 aa20.7■□□□□ 0.9
FGD3-202ENST00000375482 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
FGD3-202ENST00000375482 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
FGD3-202ENST00000375482 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
FGD3-202ENST00000375482 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
FGD3-202ENST00000375482 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
FGD3-202ENST00000375482 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
FGD3-202ENST00000375482 PCGF6Q9BYE7 350 aa20.31■□□□□ 0.84
FGD3-202ENST00000375482 NACADO15069 1562 aa20.27■□□□□ 0.84
FGD3-202ENST00000375482 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
FGD3-202ENST00000375482 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
FGD3-202ENST00000375482 WIZO95785 1651 aa20.06■□□□□ 0.8
FGD3-202ENST00000375482 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
FGD3-202ENST00000375482 TTBK1Q5TCY1 1321 aaPredicted RBP19.92■□□□□ 0.78
FGD3-202ENST00000375482 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
FGD3-202ENST00000375482 UNC13AQ9UPW8 1703 aa19.74■□□□□ 0.75
FGD3-202ENST00000375482 HRCP23327 699 aa19.71■□□□□ 0.75
FGD3-202ENST00000375482 RANGAP1P46060 587 aaPredicted RBP19.7■□□□□ 0.74
FGD3-202ENST00000375482 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
FGD3-202ENST00000375482 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
FGD3-202ENST00000375482 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
FGD3-202ENST00000375482 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
FGD3-202ENST00000375482 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.73
FGD3-202ENST00000375482 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
FGD3-202ENST00000375482 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
FGD3-202ENST00000375482 SOGA1O94964 1423 aa19.48■□□□□ 0.71
FGD3-202ENST00000375482 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
FGD3-202ENST00000375482 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
FGD3-202ENST00000375482 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
FGD3-202ENST00000375482 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
FGD3-202ENST00000375482 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.69
FGD3-202ENST00000375482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
FGD3-202ENST00000375482 WRNQ14191 1432 aaPredicted RBP eCLIP19.26■□□□□ 0.67
FGD3-202ENST00000375482 EIF4G1Q04637 1599 aaKnown RBP19.26■□□□□ 0.67
FGD3-202ENST00000375482 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
FGD3-202ENST00000375482 CCER1Q8TC90 406 aaPredicted RBP19.12■□□□□ 0.65
FGD3-202ENST00000375482 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
FGD3-202ENST00000375482 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
FGD3-202ENST00000375482 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
FGD3-202ENST00000375482 APLP2Q06481 763 aa18.97■□□□□ 0.63
FGD3-202ENST00000375482 TNIKQ9UKE5 1360 aa18.97■□□□□ 0.63
FGD3-202ENST00000375482 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
FGD3-202ENST00000375482 GOLGA3Q08378 1498 aa18.94■□□□□ 0.62
FGD3-202ENST00000375482 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
FGD3-202ENST00000375482 ATP1B4Q9UN42 357 aaPredicted RBP18.89■□□□□ 0.61
FGD3-202ENST00000375482 CLIP1P30622 1438 aa18.88■□□□□ 0.61
FGD3-202ENST00000375482 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
FGD3-202ENST00000375482 EEA1Q15075 1411 aa18.86■□□□□ 0.61
FGD3-202ENST00000375482 P3H3Q8IVL6 736 aa18.85■□□□□ 0.61
FGD3-202ENST00000375482 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
FGD3-202ENST00000375482 ITGAEP38570 1179 aa18.83■□□□□ 0.6
FGD3-202ENST00000375482 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.6
FGD3-202ENST00000375482 CUX1P39880 1505 aa18.76■□□□□ 0.59
FGD3-202ENST00000375482 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
FGD3-202ENST00000375482 NESP48681 1621 aa18.71■□□□□ 0.59
FGD3-202ENST00000375482 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
FGD3-202ENST00000375482 KANK4Q5T7N3 995 aaPredicted RBP18.7■□□□□ 0.58
FGD3-202ENST00000375482 CADPSQ9ULU8 1353 aa18.69■□□□□ 0.58
FGD3-202ENST00000375482 CFTRP13569 1480 aa18.69■□□□□ 0.58
FGD3-202ENST00000375482 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
FGD3-202ENST00000375482 CUX2O14529 1486 aa18.68■□□□□ 0.58
FGD3-202ENST00000375482 KIF27Q86VH2 1401 aa18.67■□□□□ 0.58
FGD3-202ENST00000375482 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
FGD3-202ENST00000375482 KIF21BO75037 1637 aa18.58■□□□□ 0.56
FGD3-202ENST00000375482 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
FGD3-202ENST00000375482 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
FGD3-202ENST00000375482 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
FGD3-202ENST00000375482 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
FGD3-202ENST00000375482 IGF1RP08069 1367 aa18.53■□□□□ 0.56
FGD3-202ENST00000375482 PRXQ9BXM0 1461 aa18.52■□□□□ 0.56
FGD3-202ENST00000375482 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
FGD3-202ENST00000375482 ARAP1Q96P48 1450 aa18.51■□□□□ 0.55
FGD3-202ENST00000375482 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
FGD3-202ENST00000375482 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
FGD3-202ENST00000375482 FAM50AQ14320 339 aaKnown RBP18.46■□□□□ 0.55
FGD3-202ENST00000375482 DIEXFQ68CQ4 756 aaKnown RBP18.44■□□□□ 0.54
FGD3-202ENST00000375482 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
FGD3-202ENST00000375482 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
FGD3-202ENST00000375482 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
FGD3-202ENST00000375482 FHOD3Q2V2M9 1422 aa18.34■□□□□ 0.53
FGD3-202ENST00000375482 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.52
FGD3-202ENST00000375482 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
FGD3-202ENST00000375482 FBLN2P98095 1184 aa18.28■□□□□ 0.52
FGD3-202ENST00000375482 ZNF316A6NFI3 1004 aaPredicted RBP18.26■□□□□ 0.51
FGD3-202ENST00000375482 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
FGD3-202ENST00000375482 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
FGD3-202ENST00000375482 CCNB3Q8WWL7 1395 aa18.21■□□□□ 0.51
FGD3-202ENST00000375482 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.5
FGD3-202ENST00000375482 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms