RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
CACNA1C-204ENST00000347598 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
CACNA1C-204ENST00000347598 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
CACNA1C-204ENST00000347598 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
CACNA1C-204ENST00000347598 APLP2Q06481 763 aa18.78■□□□□ 0.6
CACNA1C-204ENST00000347598 FAM9AQ8IZU1 332 aaPredicted RBP18.75■□□□□ 0.59
CACNA1C-204ENST00000347598 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
CACNA1C-204ENST00000347598 ERICH6Q7L0X2 663 aa18.58■□□□□ 0.56
CACNA1C-204ENST00000347598 TTBK1Q5TCY1 1321 aaPredicted RBP18.5■□□□□ 0.55
CACNA1C-204ENST00000347598 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
CACNA1C-204ENST00000347598 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
CACNA1C-204ENST00000347598 ATP1B4Q9UN42 357 aaPredicted RBP18.3■□□□□ 0.52
CACNA1C-204ENST00000347598 PCGF6Q9BYE7 350 aa18.12■□□□□ 0.49
CACNA1C-204ENST00000347598 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
CACNA1C-204ENST00000347598 NEFLP07196 543 aa17.92■□□□□ 0.46
CACNA1C-204ENST00000347598 MYT1LQ9UL68 1186 aa17.87■□□□□ 0.45
CACNA1C-204ENST00000347598 MYT1Q01538 1121 aa17.8■□□□□ 0.44
CACNA1C-204ENST00000347598 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
CACNA1C-204ENST00000347598 DAXXQ9UER7 740 aaPredicted RBP17.74■□□□□ 0.43
CACNA1C-204ENST00000347598 UBTFP17480 764 aaKnown RBP17.73■□□□□ 0.43
CACNA1C-204ENST00000347598 NISCHQ9Y2I1 1504 aa17.69■□□□□ 0.42
CACNA1C-204ENST00000347598 POLR3GLQ9BT43 218 aa17.67■□□□□ 0.42
CACNA1C-204ENST00000347598 ZEB1P37275 1124 aaPredicted RBP17.67■□□□□ 0.42
CACNA1C-204ENST00000347598 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
CACNA1C-204ENST00000347598 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
CACNA1C-204ENST00000347598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
CACNA1C-204ENST00000347598 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
CACNA1C-204ENST00000347598 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
CACNA1C-204ENST00000347598 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
CACNA1C-204ENST00000347598 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
CACNA1C-204ENST00000347598 ITGAEP38570 1179 aa17.4■□□□□ 0.38
CACNA1C-204ENST00000347598 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
CACNA1C-204ENST00000347598 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.35
CACNA1C-204ENST00000347598 SLC24A1O60721 1099 aa17.08■□□□□ 0.32
CACNA1C-204ENST00000347598 RTL5Q5HYW3 569 aaPredicted RBP17.07■□□□□ 0.32
CACNA1C-204ENST00000347598 ZBTB47Q9UFB7 747 aaPredicted RBP17■□□□□ 0.31
CACNA1C-204ENST00000347598 BCL11AQ9H165 835 aa16.98■□□□□ 0.31
CACNA1C-204ENST00000347598 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
CACNA1C-204ENST00000347598 BCANQ96GW7 911 aa16.89■□□□□ 0.29
CACNA1C-204ENST00000347598 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
CACNA1C-204ENST00000347598 FAM50AQ14320 339 aaKnown RBP16.84■□□□□ 0.29
CACNA1C-204ENST00000347598 CANXP27824 592 aaKnown RBP16.77■□□□□ 0.27
CACNA1C-204ENST00000347598 HRCP23327 699 aa16.76■□□□□ 0.27
CACNA1C-204ENST00000347598 ZNF326Q5BKZ1 582 aaKnown RBP16.76■□□□□ 0.27
CACNA1C-204ENST00000347598 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
CACNA1C-204ENST00000347598 NEFMP07197 916 aa16.7■□□□□ 0.26
CACNA1C-204ENST00000347598 FBLN2P98095 1184 aa16.63■□□□□ 0.25
CACNA1C-204ENST00000347598 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
CACNA1C-204ENST00000347598 LOC105371045A0A1W2PR82 267 aa16.59■□□□□ 0.25
CACNA1C-204ENST00000347598 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
CACNA1C-204ENST00000347598 DIEXFQ68CQ4 756 aaKnown RBP16.56■□□□□ 0.24
CACNA1C-204ENST00000347598 ANP32CO43423 234 aa16.54■□□□□ 0.24
CACNA1C-204ENST00000347598 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
CACNA1C-204ENST00000347598 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
CACNA1C-204ENST00000347598 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
CACNA1C-204ENST00000347598 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
CACNA1C-204ENST00000347598 ANP32BQ92688 251 aaKnown RBP16.4■□□□□ 0.22
CACNA1C-204ENST00000347598 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-204ENST00000347598 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-204ENST00000347598 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-204ENST00000347598 ANP32AP39687 249 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-204ENST00000347598 A0A0G2JS52 829 aa16.33■□□□□ 0.21
CACNA1C-204ENST00000347598 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.2
CACNA1C-204ENST00000347598 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNA1C-204ENST00000347598 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
CACNA1C-204ENST00000347598 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
CACNA1C-204ENST00000347598 EIF5BO60841 1220 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-204ENST00000347598 GTF3C3Q9Y5Q9 886 aa16.21■□□□□ 0.19
CACNA1C-204ENST00000347598 UPF2Q9HAU5 1272 aaKnown RBP16.2■□□□□ 0.18
CACNA1C-204ENST00000347598 ZBTB7CA1YPR0 619 aa16.16■□□□□ 0.18
CACNA1C-204ENST00000347598 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
CACNA1C-204ENST00000347598 NPM1P06748 294 aaKnown RBP eCLIP16.11■□□□□ 0.17
CACNA1C-204ENST00000347598 SALL2Q9Y467 1007 aaPredicted RBP16.1■□□□□ 0.17
CACNA1C-204ENST00000347598 ARXQ96QS3 562 aa16.1■□□□□ 0.17
CACNA1C-204ENST00000347598 TULP1O00294 542 aaPredicted RBP16.09■□□□□ 0.17
CACNA1C-204ENST00000347598 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
CACNA1C-204ENST00000347598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
CACNA1C-204ENST00000347598 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
CACNA1C-204ENST00000347598 ABCC9O60706 1549 aa16■□□□□ 0.15
CACNA1C-204ENST00000347598 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
CACNA1C-204ENST00000347598 GLIPR1L2Q4G1C9 344 aa15.98■□□□□ 0.15
CACNA1C-204ENST00000347598 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.97■□□□□ 0.15
CACNA1C-204ENST00000347598 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
CACNA1C-204ENST00000347598 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
CACNA1C-204ENST00000347598 HAP1P54257 671 aaPredicted RBP15.96■□□□□ 0.14
CACNA1C-204ENST00000347598 FKBP8Q14318 412 aa15.95■□□□□ 0.14
CACNA1C-204ENST00000347598 NBR1Q14596 966 aa15.91■□□□□ 0.14
CACNA1C-204ENST00000347598 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
CACNA1C-204ENST00000347598 TONSLQ96HA7 1378 aa15.9■□□□□ 0.14
CACNA1C-204ENST00000347598 TMC1Q8TDI8 760 aa15.88■□□□□ 0.13
CACNA1C-204ENST00000347598 NCLP19338 710 aaKnown RBP15.87■□□□□ 0.13
CACNA1C-204ENST00000347598 KDM2AQ9Y2K7 1162 aa15.86■□□□□ 0.13
CACNA1C-204ENST00000347598 CCDC136Q96JN2 1154 aa15.84■□□□□ 0.13
CACNA1C-204ENST00000347598 NPHP1O15259 732 aa15.83■□□□□ 0.13
CACNA1C-204ENST00000347598 TPRNQ4KMQ1 711 aa15.83■□□□□ 0.13
CACNA1C-204ENST00000347598 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
CACNA1C-204ENST00000347598 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
CACNA1C-204ENST00000347598 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
CACNA1C-204ENST00000347598 TAOK2Q9UL54 1235 aa15.8■□□□□ 0.12
CACNA1C-204ENST00000347598 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms