Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 METTL12-201ENST00000398922 1368 ntTSL 411.98□□□□□ -0.491e-7■■■■□ 23.7
CSTF2TQ9H0L4 MRPS18C-206ENST00000509571 442 ntTSL 310.8□□□□□ -0.687e-7■■■■□ 23.6
CSTF2TQ9H0L4 MRPS18C-204ENST00000507019 666 ntTSL 2 BASIC10.24□□□□□ -0.777e-7■■■■□ 23.6
CSTF2TQ9H0L4 MRPS18C-207ENST00000509970 855 ntTSL 37.97□□□□□ -1.137e-7■■■■□ 23.6
CSTF2TQ9H0L4 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.247e-7■■■■□ 23.6
CSTF2TQ9H0L4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.614e-7■■■■□ 23.6
CSTF2TQ9H0L4 CRIP2-205ENST00000548309 1893 ntTSL 1 (best)17.05■□□□□ 0.327e-7■■■■□ 23.6
CSTF2TQ9H0L4 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.665e-7■■■■□ 23.6
CSTF2TQ9H0L4 MAP3K12-207ENST00000548565 150 ntTSL 35.43□□□□□ -1.541e-6■■■■□ 23.6
CSTF2TQ9H0L4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.132e-6■■■■□ 23.6
CSTF2TQ9H0L4 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.522e-6■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-205ENST00000444184 1887 ntTSL 1 (best)17.39■□□□□ 0.377e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.08■□□□□ 07e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.23□□□□□ -0.297e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC11.63□□□□□ -0.557e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC11.46□□□□□ -0.577e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC10.62□□□□□ -0.717e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-220ENST00000625171 830 ntTSL 510.55□□□□□ -0.727e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-214ENST00000622680 781 ntTSL 1 (best)10.42□□□□□ -0.747e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-207ENST00000454635 910 ntTSL 5 BASIC9.98□□□□□ -0.817e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC9.61□□□□□ -0.877e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-219ENST00000624390 472 ntTSL 57.84□□□□□ -1.157e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-218ENST00000624138 261 ntTSL 56.95□□□□□ -1.37e-7■■■■□ 23.6
CSTF2TQ9H0L4 LINC00963-215ENST00000622972 444 ntTSL 55.54□□□□□ -1.527e-7■■■■□ 23.6
CSTF2TQ9H0L4 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.22□□□□□ -0.459e-10■■■■□ 23.6
CSTF2TQ9H0L4 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC11.91□□□□□ -0.59e-10■■■■□ 23.6
CSTF2TQ9H0L4 G2E3-210ENST00000552488 786 ntTSL 311.26□□□□□ -0.619e-10■■■■□ 23.6
CSTF2TQ9H0L4 G2E3-203ENST00000544007 1003 ntTSL 25.6□□□□□ -1.519e-10■■■■□ 23.6
CSTF2TQ9H0L4 G2E3-209ENST00000550944 565 ntTSL 25.38□□□□□ -1.559e-10■■■■□ 23.6
CSTF2TQ9H0L4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.759e-10■■■■□ 23.6
CSTF2TQ9H0L4 PCNT-205ENST00000480896 10485 ntTSL 1 (best)10.4□□□□□ -0.741e-6■■■■□ 23.6
CSTF2TQ9H0L4 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.781e-6■■■■□ 23.6
CSTF2TQ9H0L4 CTSD-209ENST00000637158 1200 ntTSL 517.37■□□□□ 0.371e-6■■■■□ 23.6
CSTF2TQ9H0L4 CTIF-203ENST00000587752 683 ntTSL 514.18□□□□□ -0.143e-7■■■■□ 23.6
CSTF2TQ9H0L4 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)20.65■□□□□ 0.94e-7■■■■□ 23.6
CSTF2TQ9H0L4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.44e-7■■■■□ 23.6
CSTF2TQ9H0L4 RPH3AL-212ENST00000573780 531 ntTSL 413.6□□□□□ -0.235e-7■■■■□ 23.6
CSTF2TQ9H0L4 GNAQ-202ENST00000411677 551 ntTSL 39.58□□□□□ -0.885e-8■■■■□ 23.6
CSTF2TQ9H0L4 CRIP2-206ENST00000548923 582 ntTSL 314.71□□□□□ -0.059e-7■■■■□ 23.6
CSTF2TQ9H0L4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.18■□□□□ 0.661e-6■■■■□ 23.6
CSTF2TQ9H0L4 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.931e-12■■■■□ 23.6
CSTF2TQ9H0L4 GLB1-205ENST00000436768 558 ntTSL 321.6■■□□□ 1.052e-6■■■■□ 23.5
CSTF2TQ9H0L4 GLB1-219ENST00000498537 570 ntTSL 414.5□□□□□ -0.092e-6■■■■□ 23.5
CSTF2TQ9H0L4 GLB1-209ENST00000450835 540 ntTSL 412.6□□□□□ -0.392e-6■■■■□ 23.5
CSTF2TQ9H0L4 GLB1-211ENST00000464355 557 ntTSL 312.01□□□□□ -0.492e-6■■■■□ 23.5
CSTF2TQ9H0L4 GLB1-204ENST00000415454 591 ntTSL 49.17□□□□□ -0.942e-6■■■■□ 23.5
CSTF2TQ9H0L4 GLB1-207ENST00000440656 626 ntTSL 48.25□□□□□ -1.092e-6■■■■□ 23.5
CSTF2TQ9H0L4 GLB1-206ENST00000438227 569 ntTSL 45.9□□□□□ -1.462e-6■■■■□ 23.5
CSTF2TQ9H0L4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.348e-8■■■■□ 23.5
CSTF2TQ9H0L4 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.618e-8■■■■□ 23.5
CSTF2TQ9H0L4 NOL4L-201ENST00000201961 971 ntAPPRIS ALT2 TSL 322.25■■□□□ 1.156e-7■■■■□ 23.5
CSTF2TQ9H0L4 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC9.84□□□□□ -0.834e-8■■■■□ 23.5
CSTF2TQ9H0L4 MAPK8-203ENST00000374176 5628 ntAPPRIS P5 TSL 1 (best)9.62□□□□□ -0.874e-8■■■■□ 23.5
CSTF2TQ9H0L4 MAPK8-204ENST00000374179 5637 ntTSL 1 (best)9.44□□□□□ -0.94e-8■■■■□ 23.5
CSTF2TQ9H0L4 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC7.95□□□□□ -1.144e-8■■■■□ 23.5
CSTF2TQ9H0L4 FNDC3B-206ENST00000443501 678 ntTSL 37.68□□□□□ -1.182e-8■■■■□ 23.5
CSTF2TQ9H0L4 FNDC3B-209ENST00000478016 554 ntTSL 44.34□□□□□ -1.712e-8■■■■□ 23.5
CSTF2TQ9H0L4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.31■■□□□ 16e-7■■■■□ 23.5
CSTF2TQ9H0L4 TOLLIP-206ENST00000527746 590 ntTSL 220.01■□□□□ 0.794e-7■■■■□ 23.5
CSTF2TQ9H0L4 TOLLIP-210ENST00000530506 1297 ntTSL 518.94■□□□□ 0.626e-7■■■■□ 23.5
CSTF2TQ9H0L4 TOLLIP-205ENST00000527638 561 ntTSL 418.94■□□□□ 0.624e-7■■■■□ 23.5
CSTF2TQ9H0L4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.55■□□□□ 0.566e-7■■■■□ 23.5
CSTF2TQ9H0L4 TOLLIP-211ENST00000530541 684 ntTSL 215.64■□□□□ 0.096e-7■■■■□ 23.5
CSTF2TQ9H0L4 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.36e-7■■■■□ 23.5
CSTF2TQ9H0L4 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.87□□□□□ -0.356e-7■■■■□ 23.5
CSTF2TQ9H0L4 ZNF442-203ENST00000438182 1906 ntTSL 2 BASIC11.09□□□□□ -0.638e-7■■■■□ 23.5
CSTF2TQ9H0L4 ZNF442-204ENST00000462995 536 ntTSL 49.45□□□□□ -0.98e-7■■■■□ 23.5
CSTF2TQ9H0L4 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.98e-7■■■■□ 23.5
CSTF2TQ9H0L4 ZNF442-202ENST00000424168 567 ntTSL 47.56□□□□□ -1.28e-7■■■■□ 23.5
CSTF2TQ9H0L4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.065e-7■■■■□ 23.5
CSTF2TQ9H0L4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.125e-7■■■■□ 23.5
CSTF2TQ9H0L4 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.64□□□□□ -0.235e-7■■■■□ 23.5
CSTF2TQ9H0L4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.35□□□□□ -0.275e-7■■■■□ 23.5
CSTF2TQ9H0L4 RER1-206ENST00000462129 585 ntTSL 216.58■□□□□ 0.243e-7■■■■□ 23.5
CSTF2TQ9H0L4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.371e-6■■■■□ 23.5
CSTF2TQ9H0L4 NSMCE1-214ENST00000569236 1782 ntTSL 211.64□□□□□ -0.551e-6■■■■□ 23.5
CSTF2TQ9H0L4 NSMCE1-204ENST00000563273 626 ntTSL 311.45□□□□□ -0.581e-6■■■■□ 23.5
CSTF2TQ9H0L4 NSMCE1-208ENST00000565070 1853 ntTSL 511.42□□□□□ -0.581e-6■■■■□ 23.5
CSTF2TQ9H0L4 NSMCE1-211ENST00000566087 878 ntTSL 510□□□□□ -0.811e-6■■■■□ 23.5
CSTF2TQ9H0L4 NSMCE1-203ENST00000562039 260 ntTSL 38.93□□□□□ -0.981e-6■■■■□ 23.5
CSTF2TQ9H0L4 PFKL-210ENST00000496824 1063 ntTSL 518.69■□□□□ 0.582e-7■■■■□ 23.5
CSTF2TQ9H0L4 ACTR3-204ENST00000446821 818 ntTSL 315.3■□□□□ 0.045e-13■■■■□ 23.4
CSTF2TQ9H0L4 ACTR3-203ENST00000443297 566 ntTSL 412.64□□□□□ -0.395e-13■■■■□ 23.4
CSTF2TQ9H0L4 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC10.8□□□□□ -0.685e-13■■■■□ 23.4
CSTF2TQ9H0L4 DHRSX-207ENST00000478825 679 ntTSL 221.27■■□□□ 15e-7■■■■□ 23.4
CSTF2TQ9H0L4 DHRSX-205ENST00000444280 797 ntTSL 216.09■□□□□ 0.175e-7■■■■□ 23.4
CSTF2TQ9H0L4 MMP25-AS1-202ENST00000572222 410 ntTSL 313.86□□□□□ -0.192e-6■■■■□ 23.4
CSTF2TQ9H0L4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.444e-7■■■■□ 23.4
CSTF2TQ9H0L4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.56□□□□□ -0.084e-7■■■■□ 23.4
CSTF2TQ9H0L4 TCEA2-213ENST00000475792 655 ntTSL 216.45■□□□□ 0.225e-7■■■■□ 23.4
CSTF2TQ9H0L4 SDF4-206ENST00000478938 2591 ntTSL 221.01■□□□□ 0.953e-7■■■■□ 23.4
CSTF2TQ9H0L4 RAI1-202ENST00000395774 2928 ntTSL 214.69□□□□□ -0.064e-7■■■■□ 23.4
CSTF2TQ9H0L4 NOL4L-209ENST00000485364 885 ntTSL 1 (best)22.64■■□□□ 1.216e-7■■■■□ 23.4
CSTF2TQ9H0L4 TMEM120B-201ENST00000342607 2766 ntTSL 221.81■■□□□ 1.084e-7■■■■□ 23.4
CSTF2TQ9H0L4 C1QTNF12-205ENST00000486627 639 ntTSL 321.23■□□□□ 0.998e-8■■■■□ 23.4
CSTF2TQ9H0L4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.76■□□□□ 0.913e-8■■■■□ 23.4
CSTF2TQ9H0L4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.485e-13■■■■□ 23.4
CSTF2TQ9H0L4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.395e-13■■■■□ 23.4
CSTF2TQ9H0L4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.83■□□□□ 0.286e-7■■■■□ 23.4
CSTF2TQ9H0L4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.086e-7■■■■□ 23.4
Retrieved 100 of 19,151 protein–RNA pairs in 184.7 ms