RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
NSMCE1-211ENST00000566087 ABCC9O60706 1549 aa23.86■■□□□ 1.41
NSMCE1-211ENST00000566087 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
NSMCE1-211ENST00000566087 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
NSMCE1-211ENST00000566087 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
NSMCE1-211ENST00000566087 NACADO15069 1562 aa22.27■■□□□ 1.16
NSMCE1-211ENST00000566087 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
NSMCE1-211ENST00000566087 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
NSMCE1-211ENST00000566087 UNC13AQ9UPW8 1703 aa22.08■■□□□ 1.12
NSMCE1-211ENST00000566087 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
NSMCE1-211ENST00000566087 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
NSMCE1-211ENST00000566087 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
NSMCE1-211ENST00000566087 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
NSMCE1-211ENST00000566087 SCRIBQ14160 1630 aa21.49■■□□□ 1.03
NSMCE1-211ENST00000566087 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
NSMCE1-211ENST00000566087 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.03
NSMCE1-211ENST00000566087 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
NSMCE1-211ENST00000566087 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
NSMCE1-211ENST00000566087 EIF4G1Q04637 1599 aaKnown RBP21.39■■□□□ 1.01
NSMCE1-211ENST00000566087 DNAJC5Q9H3Z4 198 aa20.93■□□□□ 0.94
NSMCE1-211ENST00000566087 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
NSMCE1-211ENST00000566087 CUX2O14529 1486 aa20.59■□□□□ 0.89
NSMCE1-211ENST00000566087 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
NSMCE1-211ENST00000566087 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
NSMCE1-211ENST00000566087 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
NSMCE1-211ENST00000566087 NESP48681 1621 aa20.43■□□□□ 0.86
NSMCE1-211ENST00000566087 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
NSMCE1-211ENST00000566087 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
NSMCE1-211ENST00000566087 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
NSMCE1-211ENST00000566087 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
NSMCE1-211ENST00000566087 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
NSMCE1-211ENST00000566087 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
NSMCE1-211ENST00000566087 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
NSMCE1-211ENST00000566087 LAMC3Q9Y6N6 1575 aa20.16■□□□□ 0.82
NSMCE1-211ENST00000566087 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
NSMCE1-211ENST00000566087 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
NSMCE1-211ENST00000566087 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
NSMCE1-211ENST00000566087 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
NSMCE1-211ENST00000566087 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
NSMCE1-211ENST00000566087 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
NSMCE1-211ENST00000566087 WIZO95785 1651 aa19.91■□□□□ 0.78
NSMCE1-211ENST00000566087 WDR62O43379 1518 aa19.87■□□□□ 0.77
NSMCE1-211ENST00000566087 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
NSMCE1-211ENST00000566087 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
NSMCE1-211ENST00000566087 CFTRP13569 1480 aa19.66■□□□□ 0.74
NSMCE1-211ENST00000566087 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
NSMCE1-211ENST00000566087 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
NSMCE1-211ENST00000566087 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
NSMCE1-211ENST00000566087 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
NSMCE1-211ENST00000566087 PRDM2Q13029 1718 aa19.46■□□□□ 0.71
NSMCE1-211ENST00000566087 RIMBP3CA6NJZ7 1639 aa19.45■□□□□ 0.7
NSMCE1-211ENST00000566087 RIMBP3BA6NNM3 1639 aa19.45■□□□□ 0.7
NSMCE1-211ENST00000566087 RIMBP3Q9UFD9 1639 aa19.45■□□□□ 0.7
NSMCE1-211ENST00000566087 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
NSMCE1-211ENST00000566087 CCDC88BA6NC98 1476 aa19.38■□□□□ 0.69
NSMCE1-211ENST00000566087 IFT140Q96RY7 1462 aa19.38■□□□□ 0.69
NSMCE1-211ENST00000566087 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
NSMCE1-211ENST00000566087 TOPBP1Q92547 1522 aa19.34■□□□□ 0.69
NSMCE1-211ENST00000566087 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
NSMCE1-211ENST00000566087 CYB5RLQ6IPT4 315 aa19.24■□□□□ 0.67
NSMCE1-211ENST00000566087 CHD1O14646 1710 aa19.24■□□□□ 0.67
NSMCE1-211ENST00000566087 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
NSMCE1-211ENST00000566087 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.67
NSMCE1-211ENST00000566087 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
NSMCE1-211ENST00000566087 TARBP1Q13395 1621 aaKnown RBP19.19■□□□□ 0.66
NSMCE1-211ENST00000566087 FBLN2P98095 1184 aa19.17■□□□□ 0.66
NSMCE1-211ENST00000566087 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
NSMCE1-211ENST00000566087 TRHP20396 242 aaPredicted RBP19.13■□□□□ 0.65
NSMCE1-211ENST00000566087 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
NSMCE1-211ENST00000566087 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
NSMCE1-211ENST00000566087 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
NSMCE1-211ENST00000566087 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
NSMCE1-211ENST00000566087 SOGA1O94964 1423 aa19.03■□□□□ 0.64
NSMCE1-211ENST00000566087 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
NSMCE1-211ENST00000566087 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
NSMCE1-211ENST00000566087 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
NSMCE1-211ENST00000566087 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
NSMCE1-211ENST00000566087 CUX1P39880 1505 aa18.93■□□□□ 0.62
NSMCE1-211ENST00000566087 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
NSMCE1-211ENST00000566087 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
NSMCE1-211ENST00000566087 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
NSMCE1-211ENST00000566087 GRIN2BQ13224 1484 aa18.88■□□□□ 0.61
NSMCE1-211ENST00000566087 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
NSMCE1-211ENST00000566087 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
NSMCE1-211ENST00000566087 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
NSMCE1-211ENST00000566087 ABCA5Q8WWZ7 1642 aa18.74■□□□□ 0.59
NSMCE1-211ENST00000566087 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
NSMCE1-211ENST00000566087 ABCA10Q8WWZ4 1543 aa18.71■□□□□ 0.59
NSMCE1-211ENST00000566087 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
NSMCE1-211ENST00000566087 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
NSMCE1-211ENST00000566087 ADAMTS12P58397 1594 aa18.62■□□□□ 0.57
NSMCE1-211ENST00000566087 NUP160Q12769 1436 aa18.57■□□□□ 0.56
NSMCE1-211ENST00000566087 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
NSMCE1-211ENST00000566087 SHROOM2Q13796 1616 aa18.54■□□□□ 0.56
NSMCE1-211ENST00000566087 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.56
NSMCE1-211ENST00000566087 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.56
NSMCE1-211ENST00000566087 TOP2BQ02880 1626 aa18.52■□□□□ 0.55
NSMCE1-211ENST00000566087 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
NSMCE1-211ENST00000566087 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
NSMCE1-211ENST00000566087 PRG4Q92954 1404 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms