RNA–Protein interactions for RNA: ENST00000573780.5

RPH3AL-212, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 4

Gene RPH3AL, Length 531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-212ENST00000573780 NISCHQ9Y2I1 1504 aa36.58■■■■□ 3.45
RPH3AL-212ENST00000573780 ABCC9O60706 1549 aa33.68■■■□□ 2.98
RPH3AL-212ENST00000573780 CCDC180Q9P1Z9 1646 aa33.14■■■□□ 2.9
RPH3AL-212ENST00000573780 DNAJC5BQ9UF47 199 aa32.17■■■□□ 2.74
RPH3AL-212ENST00000573780 RB1CC1Q8TDY2 1594 aa31.83■■■□□ 2.69
RPH3AL-212ENST00000573780 NACADO15069 1562 aa31.47■■■□□ 2.63
RPH3AL-212ENST00000573780 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.59
RPH3AL-212ENST00000573780 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
RPH3AL-212ENST00000573780 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
RPH3AL-212ENST00000573780 BICRAQ9NZM4 1560 aa30.93■■■□□ 2.54
RPH3AL-212ENST00000573780 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
RPH3AL-212ENST00000573780 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
RPH3AL-212ENST00000573780 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
RPH3AL-212ENST00000573780 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
RPH3AL-212ENST00000573780 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
RPH3AL-212ENST00000573780 EIF4G1Q04637 1599 aaKnown RBP30.21■■■□□ 2.43
RPH3AL-212ENST00000573780 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
RPH3AL-212ENST00000573780 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
RPH3AL-212ENST00000573780 DNAJC5Q9H3Z4 198 aa30.05■■■□□ 2.4
RPH3AL-212ENST00000573780 CUX2O14529 1486 aa29.35■■■□□ 2.29
RPH3AL-212ENST00000573780 ERCC6Q03468 1493 aa29.13■■■□□ 2.25
RPH3AL-212ENST00000573780 NCAPD3P42695 1498 aa29.06■■■□□ 2.24
RPH3AL-212ENST00000573780 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
RPH3AL-212ENST00000573780 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
RPH3AL-212ENST00000573780 NESP48681 1621 aa28.76■■■□□ 2.19
RPH3AL-212ENST00000573780 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
RPH3AL-212ENST00000573780 SMARCA4P51532 1647 aa28.67■■■□□ 2.18
RPH3AL-212ENST00000573780 THOC2Q8NI27 1593 aaKnown RBP28.64■■■□□ 2.18
RPH3AL-212ENST00000573780 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
RPH3AL-212ENST00000573780 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
RPH3AL-212ENST00000573780 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
RPH3AL-212ENST00000573780 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
RPH3AL-212ENST00000573780 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.14
RPH3AL-212ENST00000573780 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
RPH3AL-212ENST00000573780 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
RPH3AL-212ENST00000573780 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
RPH3AL-212ENST00000573780 MRC2Q9UBG0 1479 aa28.13■■■□□ 2.09
RPH3AL-212ENST00000573780 CADPSQ9ULU8 1353 aa28.12■■■□□ 2.09
RPH3AL-212ENST00000573780 WDR62O43379 1518 aa28.11■■■□□ 2.09
RPH3AL-212ENST00000573780 CEP164Q9UPV0 1460 aa27.88■■■□□ 2.05
RPH3AL-212ENST00000573780 OSCARQ8IYS5 282 aa27.87■■■□□ 2.05
RPH3AL-212ENST00000573780 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
RPH3AL-212ENST00000573780 WIZO95785 1651 aa27.78■■■□□ 2.04
RPH3AL-212ENST00000573780 CFTRP13569 1480 aa27.69■■■□□ 2.02
RPH3AL-212ENST00000573780 URB2Q14146 1524 aaKnown RBP27.61■■■□□ 2.01
RPH3AL-212ENST00000573780 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
RPH3AL-212ENST00000573780 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
RPH3AL-212ENST00000573780 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
RPH3AL-212ENST00000573780 ARHGEF11O15085 1522 aa27.44■■□□□ 1.98
RPH3AL-212ENST00000573780 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
RPH3AL-212ENST00000573780 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
RPH3AL-212ENST00000573780 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
RPH3AL-212ENST00000573780 ZNF608Q9ULD9 1512 aaPredicted RBP27.36■■□□□ 1.97
RPH3AL-212ENST00000573780 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
RPH3AL-212ENST00000573780 CYB5RLQ6IPT4 315 aa27.23■■□□□ 1.95
RPH3AL-212ENST00000573780 TOPBP1Q92547 1522 aa27.21■■□□□ 1.95
RPH3AL-212ENST00000573780 EIF4G3O43432 1585 aaKnown RBP27.2■■□□□ 1.94
RPH3AL-212ENST00000573780 ABCC8Q09428 1581 aa27.14■■□□□ 1.93
RPH3AL-212ENST00000573780 TRHP20396 242 aaPredicted RBP27.12■■□□□ 1.93
RPH3AL-212ENST00000573780 CHD1O14646 1710 aa27.12■■□□□ 1.93
RPH3AL-212ENST00000573780 ARAP1Q96P48 1450 aa27.12■■□□□ 1.93
RPH3AL-212ENST00000573780 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
RPH3AL-212ENST00000573780 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
RPH3AL-212ENST00000573780 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.92
RPH3AL-212ENST00000573780 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
RPH3AL-212ENST00000573780 FBLN2P98095 1184 aa26.94■■□□□ 1.9
RPH3AL-212ENST00000573780 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
RPH3AL-212ENST00000573780 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
RPH3AL-212ENST00000573780 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
RPH3AL-212ENST00000573780 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
RPH3AL-212ENST00000573780 TDRD9Q8NDG6 1382 aaKnown RBP26.75■■□□□ 1.87
RPH3AL-212ENST00000573780 WDR97A6NE52 1622 aa26.75■■□□□ 1.87
RPH3AL-212ENST00000573780 SOGA1O94964 1423 aa26.73■■□□□ 1.87
RPH3AL-212ENST00000573780 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
RPH3AL-212ENST00000573780 SYNJ1O43426 1573 aa26.72■■□□□ 1.87
RPH3AL-212ENST00000573780 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
RPH3AL-212ENST00000573780 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
RPH3AL-212ENST00000573780 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
RPH3AL-212ENST00000573780 GRIN2BQ13224 1484 aa26.6■■□□□ 1.85
RPH3AL-212ENST00000573780 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
RPH3AL-212ENST00000573780 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
RPH3AL-212ENST00000573780 CUX1P39880 1505 aa26.49■■□□□ 1.83
RPH3AL-212ENST00000573780 PBRM1Q86U86 1689 aa26.45■■□□□ 1.82
RPH3AL-212ENST00000573780 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
RPH3AL-212ENST00000573780 ERCC6L2Q5T890 1561 aa26.31■■□□□ 1.8
RPH3AL-212ENST00000573780 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
RPH3AL-212ENST00000573780 GRIN2AQ12879 1464 aa26.25■■□□□ 1.79
RPH3AL-212ENST00000573780 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
RPH3AL-212ENST00000573780 NUP160Q12769 1436 aa26.21■■□□□ 1.79
RPH3AL-212ENST00000573780 SHROOM2Q13796 1616 aa26.18■■□□□ 1.78
RPH3AL-212ENST00000573780 KIF13AQ9H1H9 1805 aa26.18■■□□□ 1.78
RPH3AL-212ENST00000573780 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
RPH3AL-212ENST00000573780 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
RPH3AL-212ENST00000573780 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
RPH3AL-212ENST00000573780 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
RPH3AL-212ENST00000573780 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
RPH3AL-212ENST00000573780 ABCC10Q5T3U5 1492 aa25.96■■□□□ 1.75
RPH3AL-212ENST00000573780 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
RPH3AL-212ENST00000573780 FAM69CQ0P6D2 419 aa25.92■■□□□ 1.74
RPH3AL-212ENST00000573780 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms