RNA–Protein interactions for RNA: ENST00000415792.5

ACTR3-202, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 3 BASIC

Gene ACTR3, Length 676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-202ENST00000415792 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
ACTR3-202ENST00000415792 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
ACTR3-202ENST00000415792 ABCC9O60706 1549 aa24.51■■□□□ 1.51
ACTR3-202ENST00000415792 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
ACTR3-202ENST00000415792 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
ACTR3-202ENST00000415792 NACADO15069 1562 aa23.61■■□□□ 1.37
ACTR3-202ENST00000415792 DCAF8L2P0C7V8 631 aa23.51■■□□□ 1.35
ACTR3-202ENST00000415792 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
ACTR3-202ENST00000415792 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
ACTR3-202ENST00000415792 UNC13AQ9UPW8 1703 aa23.29■■□□□ 1.32
ACTR3-202ENST00000415792 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
ACTR3-202ENST00000415792 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
ACTR3-202ENST00000415792 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
ACTR3-202ENST00000415792 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
ACTR3-202ENST00000415792 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
ACTR3-202ENST00000415792 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
ACTR3-202ENST00000415792 CC2D2AQ9P2K1 1620 aa22.22■■□□□ 1.15
ACTR3-202ENST00000415792 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
ACTR3-202ENST00000415792 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
ACTR3-202ENST00000415792 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
ACTR3-202ENST00000415792 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
ACTR3-202ENST00000415792 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.08
ACTR3-202ENST00000415792 PEG3Q9GZU2 1588 aa21.81■■□□□ 1.08
ACTR3-202ENST00000415792 SMARCA2P51531 1590 aa21.8■■□□□ 1.08
ACTR3-202ENST00000415792 WIZO95785 1651 aa21.75■■□□□ 1.07
ACTR3-202ENST00000415792 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
ACTR3-202ENST00000415792 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
ACTR3-202ENST00000415792 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
ACTR3-202ENST00000415792 RSF1Q96T23 1441 aaPredicted RBP21.65■■□□□ 1.06
ACTR3-202ENST00000415792 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
ACTR3-202ENST00000415792 NESP48681 1621 aa21.29■■□□□ 1
ACTR3-202ENST00000415792 LAMC3Q9Y6N6 1575 aa21.21■□□□□ 0.99
ACTR3-202ENST00000415792 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
ACTR3-202ENST00000415792 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
ACTR3-202ENST00000415792 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
ACTR3-202ENST00000415792 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
ACTR3-202ENST00000415792 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
ACTR3-202ENST00000415792 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
ACTR3-202ENST00000415792 CFTRP13569 1480 aa21.05■□□□□ 0.96
ACTR3-202ENST00000415792 THOC2Q8NI27 1593 aaKnown RBP21.01■□□□□ 0.95
ACTR3-202ENST00000415792 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
ACTR3-202ENST00000415792 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
ACTR3-202ENST00000415792 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
ACTR3-202ENST00000415792 MRC2Q9UBG0 1479 aa20.83■□□□□ 0.93
ACTR3-202ENST00000415792 WDR62O43379 1518 aa20.8■□□□□ 0.92
ACTR3-202ENST00000415792 CUX2O14529 1486 aa20.78■□□□□ 0.92
ACTR3-202ENST00000415792 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
ACTR3-202ENST00000415792 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
ACTR3-202ENST00000415792 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
ACTR3-202ENST00000415792 CUX1P39880 1505 aa20.57■□□□□ 0.88
ACTR3-202ENST00000415792 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
ACTR3-202ENST00000415792 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
ACTR3-202ENST00000415792 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
ACTR3-202ENST00000415792 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
ACTR3-202ENST00000415792 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
ACTR3-202ENST00000415792 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
ACTR3-202ENST00000415792 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
ACTR3-202ENST00000415792 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
ACTR3-202ENST00000415792 WDR97A6NE52 1622 aa20.4■□□□□ 0.86
ACTR3-202ENST00000415792 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
ACTR3-202ENST00000415792 ZNF608Q9ULD9 1512 aaPredicted RBP20.38■□□□□ 0.85
ACTR3-202ENST00000415792 RAD54L2Q9Y4B4 1467 aa20.38■□□□□ 0.85
ACTR3-202ENST00000415792 EIF4G3O43432 1585 aaKnown RBP20.37■□□□□ 0.85
ACTR3-202ENST00000415792 SOGA1O94964 1423 aa20.3■□□□□ 0.84
ACTR3-202ENST00000415792 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
ACTR3-202ENST00000415792 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.83
ACTR3-202ENST00000415792 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
ACTR3-202ENST00000415792 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
ACTR3-202ENST00000415792 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
ACTR3-202ENST00000415792 CHD1O14646 1710 aa20.13■□□□□ 0.81
ACTR3-202ENST00000415792 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
ACTR3-202ENST00000415792 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
ACTR3-202ENST00000415792 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
ACTR3-202ENST00000415792 ADAMTS12P58397 1594 aa20.03■□□□□ 0.8
ACTR3-202ENST00000415792 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
ACTR3-202ENST00000415792 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
ACTR3-202ENST00000415792 SYNJ2O15056 1496 aa19.94■□□□□ 0.78
ACTR3-202ENST00000415792 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
ACTR3-202ENST00000415792 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
ACTR3-202ENST00000415792 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
ACTR3-202ENST00000415792 CUL7Q14999 1698 aa19.88■□□□□ 0.77
ACTR3-202ENST00000415792 DNAJC5Q9H3Z4 198 aa19.88■□□□□ 0.77
ACTR3-202ENST00000415792 FBLN2P98095 1184 aa19.87■□□□□ 0.77
ACTR3-202ENST00000415792 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
ACTR3-202ENST00000415792 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
ACTR3-202ENST00000415792 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
ACTR3-202ENST00000415792 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
ACTR3-202ENST00000415792 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
ACTR3-202ENST00000415792 IGF1RP08069 1367 aa19.83■□□□□ 0.76
ACTR3-202ENST00000415792 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
ACTR3-202ENST00000415792 CHMP7Q8WUX9 453 aaPredicted RBP19.81■□□□□ 0.76
ACTR3-202ENST00000415792 NUP160Q12769 1436 aa19.75■□□□□ 0.75
ACTR3-202ENST00000415792 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
ACTR3-202ENST00000415792 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
ACTR3-202ENST00000415792 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
ACTR3-202ENST00000415792 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
ACTR3-202ENST00000415792 ARHGEF11O15085 1522 aa19.69■□□□□ 0.74
ACTR3-202ENST00000415792 SHROOM2Q13796 1616 aa19.66■□□□□ 0.74
ACTR3-202ENST00000415792 PRXQ9BXM0 1461 aa19.64■□□□□ 0.73
ACTR3-202ENST00000415792 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms