RNA–Protein interactions for RNA: ENST00000509571.1

MRPS18C-206, Transcript of mitochondrial ribosomal protein S18C, humanhuman

TSL 3

Gene MRPS18C, Length 442 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18C-206ENST00000509571 AEBP2Q6ZN18 517 aaPredicted RBP34.41■■■■□ 3.1
MRPS18C-206ENST00000509571 CHIC1Q5VXU3 224 aa33.1■■■□□ 2.89
MRPS18C-206ENST00000509571 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
MRPS18C-206ENST00000509571 PHF23Q9BUL5 403 aaPredicted RBP29.05■■■□□ 2.24
MRPS18C-206ENST00000509571 FOXD1Q16676 465 aa27.22■■□□□ 1.95
MRPS18C-206ENST00000509571 PLPPR3Q6T4P5 718 aa26.61■■□□□ 1.85
MRPS18C-206ENST00000509571 PPP6R1Q9UPN7 881 aa25.78■■□□□ 1.72
MRPS18C-206ENST00000509571 ADRA2BP18089 450 aa25.69■■□□□ 1.7
MRPS18C-206ENST00000509571 PIAS4Q8N2W9 510 aaPredicted RBP25.5■■□□□ 1.67
MRPS18C-206ENST00000509571 MSH5O43196 834 aa25.31■■□□□ 1.64
MRPS18C-206ENST00000509571 POTEDQ86YR6 584 aa23.95■■□□□ 1.42
MRPS18C-206ENST00000509571 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
MRPS18C-206ENST00000509571 MAPK8IP2Q13387 824 aaPredicted RBP23.46■■□□□ 1.35
MRPS18C-206ENST00000509571 PPP4R3CPQ6ZMV5 832 aa23.37■■□□□ 1.33
MRPS18C-206ENST00000509571 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
MRPS18C-206ENST00000509571 KCNA4P22459 653 aa22.97■■□□□ 1.27
MRPS18C-206ENST00000509571 CNKSR2Q8WXI2 1034 aa22.85■■□□□ 1.25
MRPS18C-206ENST00000509571 HOXD11P31277 338 aaPredicted RBP22.63■■□□□ 1.21
MRPS18C-206ENST00000509571 NCBP3Q53F19 620 aaKnown RBP22.59■■□□□ 1.21
MRPS18C-206ENST00000509571 RNF216Q9NWF9 866 aaPredicted RBP22.55■■□□□ 1.2
MRPS18C-206ENST00000509571 NPM3O75607 178 aaKnown RBP22.3■■□□□ 1.16
MRPS18C-206ENST00000509571 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
MRPS18C-206ENST00000509571 DCAF8L1A6NGE4 600 aa22.17■■□□□ 1.14
MRPS18C-206ENST00000509571 SLC4A1APQ9BWU0 796 aaKnown RBP22.07■■□□□ 1.12
MRPS18C-206ENST00000509571 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
MRPS18C-206ENST00000509571 CSRNP3Q8WYN3 585 aa21.68■■□□□ 1.06
MRPS18C-206ENST00000509571 RNF39Q9H2S5 420 aa21.66■■□□□ 1.06
MRPS18C-206ENST00000509571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.45■■□□□ 1.02
MRPS18C-206ENST00000509571 CACNB1Q02641 598 aaPredicted RBP21.38■■□□□ 1.01
MRPS18C-206ENST00000509571 C1QBPQ07021 282 aaKnown RBP21.35■■□□□ 1.01
MRPS18C-206ENST00000509571 SLC4A2P04920 1241 aa21.21■□□□□ 0.99
MRPS18C-206ENST00000509571 U3KPZ7 1027 aaPredicted RBP21.13■□□□□ 0.97
MRPS18C-206ENST00000509571 ZBTB22O15209 634 aa21.1■□□□□ 0.97
MRPS18C-206ENST00000509571 FOXD4L1Q9NU39 408 aa20.95■□□□□ 0.94
MRPS18C-206ENST00000509571 SPINK5Q9NQ38 1064 aaPredicted RBP20.66■□□□□ 0.9
MRPS18C-206ENST00000509571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
MRPS18C-206ENST00000509571 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
MRPS18C-206ENST00000509571 MYCNP04198 464 aaPredicted RBP20.61■□□□□ 0.89
MRPS18C-206ENST00000509571 SAMD1Q6SPF0 538 aaPredicted RBP20.57■□□□□ 0.88
MRPS18C-206ENST00000509571 CAPN15O75808 1086 aa20.55■□□□□ 0.88
MRPS18C-206ENST00000509571 APLP2Q06481 763 aa20.54■□□□□ 0.88
MRPS18C-206ENST00000509571 DSG3P32926 999 aa20.41■□□□□ 0.86
MRPS18C-206ENST00000509571 ZNF219Q9P2Y4 722 aaPredicted RBP20.37■□□□□ 0.85
MRPS18C-206ENST00000509571 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
MRPS18C-206ENST00000509571 ATXN8OSP0DMR3 200 aa20.21■□□□□ 0.83
MRPS18C-206ENST00000509571 ABCB7O75027 752 aa20.12■□□□□ 0.81
MRPS18C-206ENST00000509571 ATF5Q9Y2D1 282 aaPredicted RBP20.1■□□□□ 0.81
MRPS18C-206ENST00000509571 POLA2Q14181 598 aa19.9■□□□□ 0.78
MRPS18C-206ENST00000509571 ZBTB12Q9Y330 459 aaPredicted RBP19.58■□□□□ 0.72
MRPS18C-206ENST00000509571 FKBP8Q14318 412 aa19.57■□□□□ 0.72
MRPS18C-206ENST00000509571 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
MRPS18C-206ENST00000509571 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
MRPS18C-206ENST00000509571 FBLN2P98095 1184 aa19.24■□□□□ 0.67
MRPS18C-206ENST00000509571 AMER1Q5JTC6 1135 aaPredicted RBP19.24■□□□□ 0.67
MRPS18C-206ENST00000509571 MKRN4PQ13434 485 aaPredicted RBP19.23■□□□□ 0.67
MRPS18C-206ENST00000509571 RTN4Q9NQC3 1192 aaKnown RBP19.14■□□□□ 0.65
MRPS18C-206ENST00000509571 AKT1S1Q96B36 256 aa19.1■□□□□ 0.65
MRPS18C-206ENST00000509571 SPDYE2BA6NHP3 402 aa19.02■□□□□ 0.64
MRPS18C-206ENST00000509571 SPDYE6P0CI01 402 aa19.02■□□□□ 0.64
MRPS18C-206ENST00000509571 SPDYE2Q495Y8 402 aa19.02■□□□□ 0.64
MRPS18C-206ENST00000509571 REM2Q8IYK8 340 aaPredicted RBP18.91■□□□□ 0.62
MRPS18C-206ENST00000509571 SSUH2Q9Y2M2 353 aa18.86■□□□□ 0.61
MRPS18C-206ENST00000509571 CHRDL2Q6WN34 429 aa18.85■□□□□ 0.61
MRPS18C-206ENST00000509571 SPDYE4A6NLX3 237 aa18.84■□□□□ 0.61
MRPS18C-206ENST00000509571 POTEHQ6S545 545 aa18.84■□□□□ 0.61
MRPS18C-206ENST00000509571 ZNF692Q9BU19 519 aaPredicted RBP18.8■□□□□ 0.6
MRPS18C-206ENST00000509571 FBXO3Q9UK99 471 aa18.75■□□□□ 0.59
MRPS18C-206ENST00000509571 PITPNM1O00562 1244 aa18.71■□□□□ 0.59
MRPS18C-206ENST00000509571 SLC24A1O60721 1099 aa18.6■□□□□ 0.57
MRPS18C-206ENST00000509571 PROM2Q8N271 834 aa18.58■□□□□ 0.56
MRPS18C-206ENST00000509571 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
MRPS18C-206ENST00000509571 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
MRPS18C-206ENST00000509571 PIP4P2Q8N4L2 257 aa18.5■□□□□ 0.55
MRPS18C-206ENST00000509571 FXR2P51116 673 aaKnown RBP eCLIP18.48■□□□□ 0.55
MRPS18C-206ENST00000509571 CLEC11AQ9Y240 323 aa18.42■□□□□ 0.54
MRPS18C-206ENST00000509571 VASPP50552 380 aaPredicted RBP18.39■□□□□ 0.53
MRPS18C-206ENST00000509571 PRR29P0C7W0 189 aa18.21■□□□□ 0.51
MRPS18C-206ENST00000509571 PRKAR2AP13861 404 aaKnown RBP18.19■□□□□ 0.5
MRPS18C-206ENST00000509571 IFNLR1Q8IU57 520 aaPredicted RBP18.18■□□□□ 0.5
MRPS18C-206ENST00000509571 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
MRPS18C-206ENST00000509571 CHADLQ6NUI6 762 aa18.07■□□□□ 0.48
MRPS18C-206ENST00000509571 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
MRPS18C-206ENST00000509571 HAX1O00165 279 aa17.97■□□□□ 0.47
MRPS18C-206ENST00000509571 CREBZFQ9NS37 354 aa17.93■□□□□ 0.46
MRPS18C-206ENST00000509571 SPOCK2Q92563 424 aa17.9■□□□□ 0.46
MRPS18C-206ENST00000509571 PLCD3Q8N3E9 789 aa17.89■□□□□ 0.45
MRPS18C-206ENST00000509571 SP7Q8TDD2 431 aaPredicted RBP17.88■□□□□ 0.45
MRPS18C-206ENST00000509571 FARP1Q9Y4F1 1045 aaPredicted RBP17.88■□□□□ 0.45
MRPS18C-206ENST00000509571 C19orf67A6NJJ6 358 aa17.87■□□□□ 0.45
MRPS18C-206ENST00000509571 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
MRPS18C-206ENST00000509571 PKD2Q13563 968 aa17.86■□□□□ 0.45
MRPS18C-206ENST00000509571 EVX2Q03828 476 aa17.84■□□□□ 0.45
MRPS18C-206ENST00000509571 MIER1Q8N108 512 aa17.84■□□□□ 0.45
MRPS18C-206ENST00000509571 MNX1P50219 401 aaPredicted RBP17.73■□□□□ 0.43
MRPS18C-206ENST00000509571 PLCB2Q00722 1185 aa17.73■□□□□ 0.43
MRPS18C-206ENST00000509571 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
MRPS18C-206ENST00000509571 ECM2O94769 699 aaPredicted RBP17.67■□□□□ 0.42
MRPS18C-206ENST00000509571 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
MRPS18C-206ENST00000509571 CD44P16070 742 aaKnown RBP17.65■□□□□ 0.42
MRPS18C-206ENST00000509571 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms