RNA–Protein interactions for RNA: ENST00000295491.8

MRPS18C-201, Transcript of mitochondrial ribosomal protein S18C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS18C, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18C-201ENST00000295491 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
MRPS18C-201ENST00000295491 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
MRPS18C-201ENST00000295491 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
MRPS18C-201ENST00000295491 POTEDQ86YR6 584 aa19.77■□□□□ 0.76
MRPS18C-201ENST00000295491 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
MRPS18C-201ENST00000295491 FOXD1Q16676 465 aa18.53■□□□□ 0.56
MRPS18C-201ENST00000295491 MSH5O43196 834 aa17.98■□□□□ 0.47
MRPS18C-201ENST00000295491 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
MRPS18C-201ENST00000295491 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
MRPS18C-201ENST00000295491 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
MRPS18C-201ENST00000295491 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
MRPS18C-201ENST00000295491 ADRA2BP18089 450 aa16.13■□□□□ 0.17
MRPS18C-201ENST00000295491 NISCHQ9Y2I1 1504 aa15.61■□□□□ 0.09
MRPS18C-201ENST00000295491 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.06
MRPS18C-201ENST00000295491 POTEHQ6S545 545 aa15.25■□□□□ 0.03
MRPS18C-201ENST00000295491 MAPK8IP2Q13387 824 aaPredicted RBP15.21■□□□□ 0.03
MRPS18C-201ENST00000295491 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
MRPS18C-201ENST00000295491 SCAF1Q9H7N4 1312 aaKnown RBP14.94□□□□□ -0.02
MRPS18C-201ENST00000295491 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
MRPS18C-201ENST00000295491 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
MRPS18C-201ENST00000295491 PPP4R3CPQ6ZMV5 832 aa14.71□□□□□ -0.05
MRPS18C-201ENST00000295491 ABCC9O60706 1549 aa14.58□□□□□ -0.07
MRPS18C-201ENST00000295491 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
MRPS18C-201ENST00000295491 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
MRPS18C-201ENST00000295491 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
MRPS18C-201ENST00000295491 CCDC180Q9P1Z9 1646 aa14.26□□□□□ -0.13
MRPS18C-201ENST00000295491 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
MRPS18C-201ENST00000295491 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
MRPS18C-201ENST00000295491 KCNA4P22459 653 aa14.12□□□□□ -0.15
MRPS18C-201ENST00000295491 NPM3O75607 178 aaKnown RBP14.03□□□□□ -0.16
MRPS18C-201ENST00000295491 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
MRPS18C-201ENST00000295491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
MRPS18C-201ENST00000295491 DSG3P32926 999 aa13.72□□□□□ -0.21
MRPS18C-201ENST00000295491 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
MRPS18C-201ENST00000295491 NACADO15069 1562 aa13.54□□□□□ -0.24
MRPS18C-201ENST00000295491 CAPN15O75808 1086 aa13.53□□□□□ -0.24
MRPS18C-201ENST00000295491 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
MRPS18C-201ENST00000295491 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
MRPS18C-201ENST00000295491 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
MRPS18C-201ENST00000295491 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
MRPS18C-201ENST00000295491 SPINK5Q9NQ38 1064 aaPredicted RBP13.39□□□□□ -0.27
MRPS18C-201ENST00000295491 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
MRPS18C-201ENST00000295491 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
MRPS18C-201ENST00000295491 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
MRPS18C-201ENST00000295491 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
MRPS18C-201ENST00000295491 MYO15BQ96JP2 1530 aa13.21□□□□□ -0.29
MRPS18C-201ENST00000295491 DNAJC5Q9H3Z4 198 aa13.21□□□□□ -0.3
MRPS18C-201ENST00000295491 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
MRPS18C-201ENST00000295491 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
MRPS18C-201ENST00000295491 PLSCR2Q9NRY7 297 aa13.18□□□□□ -0.3
MRPS18C-201ENST00000295491 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
MRPS18C-201ENST00000295491 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
MRPS18C-201ENST00000295491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
MRPS18C-201ENST00000295491 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
MRPS18C-201ENST00000295491 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
MRPS18C-201ENST00000295491 ABCB7O75027 752 aa13.05□□□□□ -0.32
MRPS18C-201ENST00000295491 APLP2Q06481 763 aa13.05□□□□□ -0.32
MRPS18C-201ENST00000295491 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
MRPS18C-201ENST00000295491 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
MRPS18C-201ENST00000295491 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
MRPS18C-201ENST00000295491 HAX1O00165 279 aa12.97□□□□□ -0.33
MRPS18C-201ENST00000295491 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
MRPS18C-201ENST00000295491 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
MRPS18C-201ENST00000295491 SCRIBQ14160 1630 aa12.92□□□□□ -0.34
MRPS18C-201ENST00000295491 ZBTB22O15209 634 aa12.91□□□□□ -0.34
MRPS18C-201ENST00000295491 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
MRPS18C-201ENST00000295491 EHMT2Q96KQ7 1210 aa12.86□□□□□ -0.35
MRPS18C-201ENST00000295491 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
MRPS18C-201ENST00000295491 LHX8Q68G74 356 aa12.81□□□□□ -0.36
MRPS18C-201ENST00000295491 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.36
MRPS18C-201ENST00000295491 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.36
MRPS18C-201ENST00000295491 CUX2O14529 1486 aa12.77□□□□□ -0.37
MRPS18C-201ENST00000295491 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
MRPS18C-201ENST00000295491 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
MRPS18C-201ENST00000295491 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
MRPS18C-201ENST00000295491 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
MRPS18C-201ENST00000295491 EVX2Q03828 476 aa12.57□□□□□ -0.4
MRPS18C-201ENST00000295491 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
MRPS18C-201ENST00000295491 POLA2Q14181 598 aa12.51□□□□□ -0.41
MRPS18C-201ENST00000295491 HRCP23327 699 aa12.5□□□□□ -0.41
MRPS18C-201ENST00000295491 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
MRPS18C-201ENST00000295491 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
MRPS18C-201ENST00000295491 MYT1Q01538 1121 aa12.45□□□□□ -0.42
MRPS18C-201ENST00000295491 TRIM41Q8WV44 630 aa12.45□□□□□ -0.42
MRPS18C-201ENST00000295491 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
MRPS18C-201ENST00000295491 NESP48681 1621 aa12.4□□□□□ -0.42
MRPS18C-201ENST00000295491 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
MRPS18C-201ENST00000295491 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
MRPS18C-201ENST00000295491 ATAD2BQ9ULI0 1458 aa12.38□□□□□ -0.43
MRPS18C-201ENST00000295491 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
MRPS18C-201ENST00000295491 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
MRPS18C-201ENST00000295491 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
MRPS18C-201ENST00000295491 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
MRPS18C-201ENST00000295491 GABBR2O75899 941 aa12.3□□□□□ -0.44
MRPS18C-201ENST00000295491 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
MRPS18C-201ENST00000295491 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
MRPS18C-201ENST00000295491 BAZ1BQ9UIG0 1483 aaKnown RBP12.26□□□□□ -0.45
MRPS18C-201ENST00000295491 FBLN2P98095 1184 aa12.25□□□□□ -0.45
MRPS18C-201ENST00000295491 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
MRPS18C-201ENST00000295491 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms