RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
NSMCE1-214ENST00000569236 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
NSMCE1-214ENST00000569236 ABCC9O60706 1549 aa26.22■■□□□ 1.79
NSMCE1-214ENST00000569236 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
NSMCE1-214ENST00000569236 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
NSMCE1-214ENST00000569236 NACADO15069 1562 aa25.24■■□□□ 1.63
NSMCE1-214ENST00000569236 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
NSMCE1-214ENST00000569236 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
NSMCE1-214ENST00000569236 DCAF1Q9Y4B6 1507 aa25.01■■□□□ 1.59
NSMCE1-214ENST00000569236 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
NSMCE1-214ENST00000569236 SCRIBQ14160 1630 aa24.52■■□□□ 1.52
NSMCE1-214ENST00000569236 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
NSMCE1-214ENST00000569236 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
NSMCE1-214ENST00000569236 SHROOM4Q9ULL8 1493 aa24.23■■□□□ 1.47
NSMCE1-214ENST00000569236 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
NSMCE1-214ENST00000569236 EIF4G1Q04637 1599 aaKnown RBP23.84■■□□□ 1.41
NSMCE1-214ENST00000569236 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
NSMCE1-214ENST00000569236 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
NSMCE1-214ENST00000569236 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
NSMCE1-214ENST00000569236 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
NSMCE1-214ENST00000569236 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
NSMCE1-214ENST00000569236 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
NSMCE1-214ENST00000569236 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
NSMCE1-214ENST00000569236 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
NSMCE1-214ENST00000569236 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
NSMCE1-214ENST00000569236 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
NSMCE1-214ENST00000569236 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
NSMCE1-214ENST00000569236 WIZO95785 1651 aa23.06■■□□□ 1.28
NSMCE1-214ENST00000569236 RSF1Q96T23 1441 aaPredicted RBP23.04■■□□□ 1.28
NSMCE1-214ENST00000569236 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
NSMCE1-214ENST00000569236 NESP48681 1621 aa22.7■■□□□ 1.22
NSMCE1-214ENST00000569236 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
NSMCE1-214ENST00000569236 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
NSMCE1-214ENST00000569236 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
NSMCE1-214ENST00000569236 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
NSMCE1-214ENST00000569236 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
NSMCE1-214ENST00000569236 PDS5BQ9NTI5 1447 aa22.51■■□□□ 1.19
NSMCE1-214ENST00000569236 CFTRP13569 1480 aa22.48■■□□□ 1.19
NSMCE1-214ENST00000569236 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
NSMCE1-214ENST00000569236 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
NSMCE1-214ENST00000569236 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
NSMCE1-214ENST00000569236 FANCD2Q9BXW9 1451 aa22.35■■□□□ 1.17
NSMCE1-214ENST00000569236 CUX2O14529 1486 aa22.34■■□□□ 1.17
NSMCE1-214ENST00000569236 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
NSMCE1-214ENST00000569236 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
NSMCE1-214ENST00000569236 WDR62O43379 1518 aa22.2■■□□□ 1.14
NSMCE1-214ENST00000569236 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
NSMCE1-214ENST00000569236 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
NSMCE1-214ENST00000569236 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
NSMCE1-214ENST00000569236 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
NSMCE1-214ENST00000569236 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
NSMCE1-214ENST00000569236 CUX1P39880 1505 aa21.84■■□□□ 1.09
NSMCE1-214ENST00000569236 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
NSMCE1-214ENST00000569236 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
NSMCE1-214ENST00000569236 TARBP1Q13395 1621 aaKnown RBP21.75■■□□□ 1.07
NSMCE1-214ENST00000569236 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
NSMCE1-214ENST00000569236 ZNF608Q9ULD9 1512 aaPredicted RBP21.73■■□□□ 1.07
NSMCE1-214ENST00000569236 SOGA1O94964 1423 aa21.73■■□□□ 1.07
NSMCE1-214ENST00000569236 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
NSMCE1-214ENST00000569236 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
NSMCE1-214ENST00000569236 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
NSMCE1-214ENST00000569236 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
NSMCE1-214ENST00000569236 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
NSMCE1-214ENST00000569236 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
NSMCE1-214ENST00000569236 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
NSMCE1-214ENST00000569236 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
NSMCE1-214ENST00000569236 DNAJC5Q9H3Z4 198 aa21.58■■□□□ 1.04
NSMCE1-214ENST00000569236 ABCA10Q8WWZ4 1543 aa21.56■■□□□ 1.04
NSMCE1-214ENST00000569236 GAPVD1Q14C86 1478 aa21.48■■□□□ 1.03
NSMCE1-214ENST00000569236 ABCA5Q8WWZ7 1642 aa21.48■■□□□ 1.03
NSMCE1-214ENST00000569236 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
NSMCE1-214ENST00000569236 PBRM1Q86U86 1689 aa21.45■■□□□ 1.02
NSMCE1-214ENST00000569236 SNAPC4Q5SXM2 1469 aa21.43■■□□□ 1.02
NSMCE1-214ENST00000569236 OSCARQ8IYS5 282 aa21.43■■□□□ 1.02
NSMCE1-214ENST00000569236 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
NSMCE1-214ENST00000569236 CHD1O14646 1710 aa21.4■■□□□ 1.02
NSMCE1-214ENST00000569236 FBLN2P98095 1184 aa21.38■■□□□ 1.01
NSMCE1-214ENST00000569236 SYNJ2O15056 1496 aa21.33■■□□□ 1
NSMCE1-214ENST00000569236 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
NSMCE1-214ENST00000569236 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
NSMCE1-214ENST00000569236 KIF27Q86VH2 1401 aa21.29■■□□□ 1
NSMCE1-214ENST00000569236 TRIM41Q8WV44 630 aa21.28■■□□□ 1
NSMCE1-214ENST00000569236 ADAMTS12P58397 1594 aa21.27■■□□□ 1
NSMCE1-214ENST00000569236 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
NSMCE1-214ENST00000569236 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
NSMCE1-214ENST00000569236 IGF1RP08069 1367 aa21.17■□□□□ 0.98
NSMCE1-214ENST00000569236 CUL7Q14999 1698 aa21.14■□□□□ 0.98
NSMCE1-214ENST00000569236 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.97
NSMCE1-214ENST00000569236 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
NSMCE1-214ENST00000569236 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
NSMCE1-214ENST00000569236 CEP170Q5SW79 1584 aa21.08■□□□□ 0.97
NSMCE1-214ENST00000569236 NUP160Q12769 1436 aa21.08■□□□□ 0.97
NSMCE1-214ENST00000569236 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.96
NSMCE1-214ENST00000569236 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.96
NSMCE1-214ENST00000569236 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.96
NSMCE1-214ENST00000569236 CARMIL1Q5VZK9 1371 aa21.05■□□□□ 0.96
NSMCE1-214ENST00000569236 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
NSMCE1-214ENST00000569236 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
NSMCE1-214ENST00000569236 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
NSMCE1-214ENST00000569236 EEA1Q15075 1411 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms