RNA–Protein interactions for RNA: ENST00000446821.5

ACTR3-204, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 3

Gene ACTR3, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-204ENST00000446821 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
ACTR3-204ENST00000446821 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
ACTR3-204ENST00000446821 ABCC9O60706 1549 aa34.34■■■■□ 3.09
ACTR3-204ENST00000446821 DCAF8L2P0C7V8 631 aa33.15■■■□□ 2.9
ACTR3-204ENST00000446821 NACADO15069 1562 aa33.1■■■□□ 2.89
ACTR3-204ENST00000446821 RB1CC1Q8TDY2 1594 aa33.1■■■□□ 2.89
ACTR3-204ENST00000446821 ZCCHC6Q5VYS8 1495 aaKnown RBP33.09■■■□□ 2.89
ACTR3-204ENST00000446821 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
ACTR3-204ENST00000446821 DCAF1Q9Y4B6 1507 aa32.86■■■□□ 2.85
ACTR3-204ENST00000446821 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
ACTR3-204ENST00000446821 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
ACTR3-204ENST00000446821 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.74
ACTR3-204ENST00000446821 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
ACTR3-204ENST00000446821 SHROOM4Q9ULL8 1493 aa31.77■■■□□ 2.68
ACTR3-204ENST00000446821 DNAJC5BQ9UF47 199 aa31.41■■■□□ 2.62
ACTR3-204ENST00000446821 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
ACTR3-204ENST00000446821 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
ACTR3-204ENST00000446821 CECR2Q9BXF3 1484 aa30.9■■■□□ 2.54
ACTR3-204ENST00000446821 SMARCA4P51532 1647 aa30.76■■■□□ 2.52
ACTR3-204ENST00000446821 BAZ1AQ9NRL2 1556 aaPredicted RBP30.76■■■□□ 2.52
ACTR3-204ENST00000446821 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
ACTR3-204ENST00000446821 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
ACTR3-204ENST00000446821 SMARCA2P51531 1590 aa30.55■■■□□ 2.48
ACTR3-204ENST00000446821 NCAPD3P42695 1498 aa30.55■■■□□ 2.48
ACTR3-204ENST00000446821 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
ACTR3-204ENST00000446821 HMGXB3Q12766 1538 aa30.39■■■□□ 2.46
ACTR3-204ENST00000446821 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
ACTR3-204ENST00000446821 RSF1Q96T23 1441 aaPredicted RBP30.3■■■□□ 2.44
ACTR3-204ENST00000446821 WIZO95785 1651 aa30.26■■■□□ 2.43
ACTR3-204ENST00000446821 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
ACTR3-204ENST00000446821 NESP48681 1621 aa29.75■■■□□ 2.35
ACTR3-204ENST00000446821 LAMC3Q9Y6N6 1575 aa29.71■■■□□ 2.35
ACTR3-204ENST00000446821 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
ACTR3-204ENST00000446821 SUPT5HO00267 1087 aaKnown RBP29.66■■■□□ 2.34
ACTR3-204ENST00000446821 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
ACTR3-204ENST00000446821 ERCC6Q03468 1493 aa29.61■■■□□ 2.33
ACTR3-204ENST00000446821 PDS5BQ9NTI5 1447 aa29.53■■■□□ 2.32
ACTR3-204ENST00000446821 CFTRP13569 1480 aa29.51■■■□□ 2.31
ACTR3-204ENST00000446821 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
ACTR3-204ENST00000446821 FANCD2Q9BXW9 1451 aa29.32■■■□□ 2.28
ACTR3-204ENST00000446821 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
ACTR3-204ENST00000446821 CEP164Q9UPV0 1460 aa29.27■■■□□ 2.28
ACTR3-204ENST00000446821 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.27
ACTR3-204ENST00000446821 CUX2O14529 1486 aa29.23■■■□□ 2.27
ACTR3-204ENST00000446821 MRC2Q9UBG0 1479 aa29.2■■■□□ 2.26
ACTR3-204ENST00000446821 WDR62O43379 1518 aa29.09■■■□□ 2.25
ACTR3-204ENST00000446821 URB2Q14146 1524 aaKnown RBP29■■■□□ 2.23
ACTR3-204ENST00000446821 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
ACTR3-204ENST00000446821 TOPBP1Q92547 1522 aa28.86■■■□□ 2.21
ACTR3-204ENST00000446821 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
ACTR3-204ENST00000446821 CUX1P39880 1505 aa28.69■■■□□ 2.18
ACTR3-204ENST00000446821 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
ACTR3-204ENST00000446821 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
ACTR3-204ENST00000446821 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
ACTR3-204ENST00000446821 WRNQ14191 1432 aaPredicted RBP eCLIP28.57■■■□□ 2.16
ACTR3-204ENST00000446821 SOGA1O94964 1423 aa28.52■■■□□ 2.16
ACTR3-204ENST00000446821 TARBP1Q13395 1621 aaKnown RBP28.52■■■□□ 2.16
ACTR3-204ENST00000446821 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
ACTR3-204ENST00000446821 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
ACTR3-204ENST00000446821 TOP2BQ02880 1626 aa28.48■■■□□ 2.15
ACTR3-204ENST00000446821 SYNJ1O43426 1573 aa28.47■■■□□ 2.15
ACTR3-204ENST00000446821 BIVM-ERCC5R4GMW8 1640 aa28.47■■■□□ 2.15
ACTR3-204ENST00000446821 EIF4G3O43432 1585 aaKnown RBP28.38■■■□□ 2.13
ACTR3-204ENST00000446821 AQRO60306 1485 aaKnown RBP eCLIP28.37■■■□□ 2.13
ACTR3-204ENST00000446821 TDRD9Q8NDG6 1382 aaKnown RBP28.35■■■□□ 2.13
ACTR3-204ENST00000446821 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
ACTR3-204ENST00000446821 ABCA10Q8WWZ4 1543 aa28.32■■■□□ 2.12
ACTR3-204ENST00000446821 DNAJC5Q9H3Z4 198 aa28.2■■■□□ 2.1
ACTR3-204ENST00000446821 GAPVD1Q14C86 1478 aa28.2■■■□□ 2.1
ACTR3-204ENST00000446821 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
ACTR3-204ENST00000446821 ABCA5Q8WWZ7 1642 aa28.17■■■□□ 2.1
ACTR3-204ENST00000446821 SNAPC4Q5SXM2 1469 aa28.1■■■□□ 2.09
ACTR3-204ENST00000446821 PBRM1Q86U86 1689 aa28.1■■■□□ 2.09
ACTR3-204ENST00000446821 OSCARQ8IYS5 282 aa28.09■■■□□ 2.09
ACTR3-204ENST00000446821 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
ACTR3-204ENST00000446821 FBLN2P98095 1184 aa28.03■■■□□ 2.08
ACTR3-204ENST00000446821 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
ACTR3-204ENST00000446821 CHD1O14646 1710 aa28■■■□□ 2.07
ACTR3-204ENST00000446821 CHMP7Q8WUX9 453 aaPredicted RBP27.98■■■□□ 2.07
ACTR3-204ENST00000446821 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
ACTR3-204ENST00000446821 ERICH3Q5RHP9 1530 aa27.97■■■□□ 2.07
ACTR3-204ENST00000446821 SYNJ2O15056 1496 aa27.97■■■□□ 2.07
ACTR3-204ENST00000446821 ADAMTS12P58397 1594 aa27.89■■■□□ 2.05
ACTR3-204ENST00000446821 FHAD1B1AJZ9 1412 aa27.88■■■□□ 2.05
ACTR3-204ENST00000446821 IGF1RP08069 1367 aa27.85■■■□□ 2.05
ACTR3-204ENST00000446821 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
ACTR3-204ENST00000446821 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
ACTR3-204ENST00000446821 CUL7Q14999 1698 aa27.75■■■□□ 2.03
ACTR3-204ENST00000446821 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
ACTR3-204ENST00000446821 CLASP1Q7Z460 1538 aa27.7■■■□□ 2.02
ACTR3-204ENST00000446821 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
ACTR3-204ENST00000446821 NUP160Q12769 1436 aa27.67■■■□□ 2.02
ACTR3-204ENST00000446821 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
ACTR3-204ENST00000446821 ARHGEF11O15085 1522 aa27.59■■■□□ 2.01
ACTR3-204ENST00000446821 RIMBP3CA6NJZ7 1639 aa27.57■■■□□ 2
ACTR3-204ENST00000446821 RIMBP3BA6NNM3 1639 aa27.57■■■□□ 2
ACTR3-204ENST00000446821 RIMBP3Q9UFD9 1639 aa27.57■■■□□ 2
ACTR3-204ENST00000446821 RAPGEF2Q9Y4G8 1499 aa27.53■■■□□ 2
ACTR3-204ENST00000446821 EEA1Q15075 1411 aa27.53■■■□□ 2
ACTR3-204ENST00000446821 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms