Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.22■□□□□ 0.19
SBSPONQ8IVN8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 AC080038.1-201ENST00000611274 1154 ntBASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 LINC01529-204ENST00000636474 1715 ntBASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SBSPONQ8IVN8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SBSPONQ8IVN8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SBSPONQ8IVN8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SBSPONQ8IVN8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 AC016769.1-201ENST00000409132 1010 ntBASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 AC144652.1-201ENST00000609974 1624 ntBASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.19■□□□□ 0.18
SBSPONQ8IVN8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 AC137761.2-201ENST00000561729 223 ntBASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 AC145350.3-201ENST00000569033 163 ntBASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SBSPONQ8IVN8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms