RNA–Protein interactions for RNA: ENST00000566056.1

AC135048.1-201, humanhuman

TSL 2 BASIC

Gene AC135048.1, Length 1,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC135048.1-201ENST00000566056 NISCHQ9Y2I1 1504 aa52.09■■■■■ 5.93
AC135048.1-201ENST00000566056 CCDC180Q9P1Z9 1646 aa46.41■■■■■ 5.02
AC135048.1-201ENST00000566056 ABCC9O60706 1549 aa45.42■■■■■ 4.86
AC135048.1-201ENST00000566056 RB1CC1Q8TDY2 1594 aa43.79■■■■■ 4.6
AC135048.1-201ENST00000566056 NACADO15069 1562 aa43.72■■■■■ 4.59
AC135048.1-201ENST00000566056 DCAF8L2P0C7V8 631 aa43.68■■■■■ 4.58
AC135048.1-201ENST00000566056 MYO15BQ96JP2 1530 aa43.46■■■■■ 4.55
AC135048.1-201ENST00000566056 ZCCHC6Q5VYS8 1495 aaKnown RBP43.34■■■■■ 4.53
AC135048.1-201ENST00000566056 DCAF1Q9Y4B6 1507 aa43.19■■■■■ 4.5
AC135048.1-201ENST00000566056 UNC13AQ9UPW8 1703 aa42.54■■■■■ 4.4
AC135048.1-201ENST00000566056 PABPN1Q86U42 306 aaKnown RBP eCLIP42.43■■■■■ 4.38
AC135048.1-201ENST00000566056 BICRAQ9NZM4 1560 aa42.25■■■■■ 4.35
AC135048.1-201ENST00000566056 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
AC135048.1-201ENST00000566056 SHROOM4Q9ULL8 1493 aa42.11■■■■■ 4.33
AC135048.1-201ENST00000566056 DNAJC5BQ9UF47 199 aa41.69■■■■■ 4.26
AC135048.1-201ENST00000566056 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
AC135048.1-201ENST00000566056 CC2D2AQ9P2K1 1620 aa41.09■■■■■ 4.17
AC135048.1-201ENST00000566056 CECR2Q9BXF3 1484 aa40.9■■■■■ 4.14
AC135048.1-201ENST00000566056 BAZ1AQ9NRL2 1556 aaPredicted RBP40.46■■■■■ 4.07
AC135048.1-201ENST00000566056 SMARCA4P51532 1647 aa40.42■■■■■ 4.06
AC135048.1-201ENST00000566056 NCAPD3P42695 1498 aa40.32■■■■■ 4.04
AC135048.1-201ENST00000566056 SMARCA2P51531 1590 aa40.3■■■■■ 4.04
AC135048.1-201ENST00000566056 ATAD2BQ9ULI0 1458 aa40.26■■■■■ 4.04
AC135048.1-201ENST00000566056 HMGXB3Q12766 1538 aa40.09■■■■■ 4.01
AC135048.1-201ENST00000566056 PEG3Q9GZU2 1588 aa40.07■■■■■ 4.01
AC135048.1-201ENST00000566056 MROH2BQ7Z745 1585 aa40.05■■■■■ 4
AC135048.1-201ENST00000566056 BAZ1BQ9UIG0 1483 aaKnown RBP39.98■■■■□ 3.99
AC135048.1-201ENST00000566056 RSF1Q96T23 1441 aaPredicted RBP39.62■■■■□ 3.93
AC135048.1-201ENST00000566056 WIZO95785 1651 aa39.6■■■■□ 3.93
AC135048.1-201ENST00000566056 ERCC6Q03468 1493 aa39.31■■■■□ 3.88
AC135048.1-201ENST00000566056 LAMC3Q9Y6N6 1575 aa39.29■■■■□ 3.88
AC135048.1-201ENST00000566056 TOP2AP11388 1531 aaKnown RBP39.28■■■■□ 3.88
AC135048.1-201ENST00000566056 NESP48681 1621 aa39.2■■■■□ 3.87
AC135048.1-201ENST00000566056 CADPSQ9ULU8 1353 aa39.15■■■■□ 3.86
AC135048.1-201ENST00000566056 PDS5BQ9NTI5 1447 aa39.11■■■■□ 3.85
AC135048.1-201ENST00000566056 CUX2O14529 1486 aa38.94■■■■□ 3.82
AC135048.1-201ENST00000566056 CFTRP13569 1480 aa38.85■■■■□ 3.81
AC135048.1-201ENST00000566056 CCDC88BA6NC98 1476 aa38.79■■■■□ 3.8
AC135048.1-201ENST00000566056 KIF21AQ7Z4S6 1674 aa38.75■■■■□ 3.79
AC135048.1-201ENST00000566056 THOC2Q8NI27 1593 aaKnown RBP38.67■■■■□ 3.78
AC135048.1-201ENST00000566056 CEP164Q9UPV0 1460 aa38.66■■■■□ 3.78
AC135048.1-201ENST00000566056 FANCD2Q9BXW9 1451 aa38.65■■■■□ 3.78
AC135048.1-201ENST00000566056 MRC2Q9UBG0 1479 aa38.6■■■■□ 3.77
AC135048.1-201ENST00000566056 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
AC135048.1-201ENST00000566056 PRDM2Q13029 1718 aa38.49■■■■□ 3.75
AC135048.1-201ENST00000566056 WDR62O43379 1518 aa38.43■■■■□ 3.74
AC135048.1-201ENST00000566056 ABCC8Q09428 1581 aa38.2■■■■□ 3.71
AC135048.1-201ENST00000566056 URB2Q14146 1524 aaKnown RBP38.17■■■■□ 3.7
AC135048.1-201ENST00000566056 TOPBP1Q92547 1522 aa37.99■■■■□ 3.67
AC135048.1-201ENST00000566056 DNMBPQ6XZF7 1577 aa37.97■■■■□ 3.67
AC135048.1-201ENST00000566056 IFT140Q96RY7 1462 aa37.88■■■■□ 3.65
AC135048.1-201ENST00000566056 DNAJC5Q9H3Z4 198 aa37.86■■■■□ 3.65
AC135048.1-201ENST00000566056 POLA1P09884 1462 aaPredicted RBP37.65■■■■□ 3.62
AC135048.1-201ENST00000566056 CUX1P39880 1505 aa37.6■■■■□ 3.61
AC135048.1-201ENST00000566056 SOGA1O94964 1423 aa37.58■■■■□ 3.61
AC135048.1-201ENST00000566056 FGD5Q6ZNL6 1462 aa37.55■■■■□ 3.6
AC135048.1-201ENST00000566056 ZNF608Q9ULD9 1512 aaPredicted RBP37.53■■■■□ 3.6
AC135048.1-201ENST00000566056 TARBP1Q13395 1621 aaKnown RBP37.52■■■■□ 3.6
AC135048.1-201ENST00000566056 WRNQ14191 1432 aaPredicted RBP eCLIP37.44■■■■□ 3.581e-6■■■■■ 58.5
AC135048.1-201ENST00000566056 RAD54L2Q9Y4B4 1467 aa37.44■■■■□ 3.58
AC135048.1-201ENST00000566056 WDR97A6NE52 1622 aa37.43■■■■□ 3.58
AC135048.1-201ENST00000566056 EIF4G3O43432 1585 aaKnown RBP37.42■■■■□ 3.58
AC135048.1-201ENST00000566056 OSCARQ8IYS5 282 aa37.38■■■■□ 3.58
AC135048.1-201ENST00000566056 AQRO60306 1485 aaKnown RBP eCLIP37.36■■■■□ 3.57
AC135048.1-201ENST00000566056 TOP2BQ02880 1626 aa37.32■■■■□ 3.56
AC135048.1-201ENST00000566056 TDRD9Q8NDG6 1382 aaKnown RBP37.31■■■■□ 3.56
AC135048.1-201ENST00000566056 BIVM-ERCC5R4GMW8 1640 aa37.29■■■■□ 3.56
AC135048.1-201ENST00000566056 ABCA10Q8WWZ4 1543 aa37.23■■■■□ 3.55
AC135048.1-201ENST00000566056 SYNJ1O43426 1573 aa37.19■■■■□ 3.54
AC135048.1-201ENST00000566056 GRIN2BQ13224 1484 aa37.17■■■■□ 3.54
AC135048.1-201ENST00000566056 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.53
AC135048.1-201ENST00000566056 MAGI1Q96QZ7 1491 aaPredicted RBP37.1■■■■□ 3.53
AC135048.1-201ENST00000566056 FBLN2P98095 1184 aa37.08■■■■□ 3.53
AC135048.1-201ENST00000566056 SNAPC4Q5SXM2 1469 aa37.04■■■■□ 3.52
AC135048.1-201ENST00000566056 CHMP7Q8WUX9 453 aaPredicted RBP37.02■■■■□ 3.52
AC135048.1-201ENST00000566056 ABCA5Q8WWZ7 1642 aa37■■■■□ 3.51
AC135048.1-201ENST00000566056 PBRM1Q86U86 1689 aa36.95■■■■□ 3.51
AC135048.1-201ENST00000566056 CHD1O14646 1710 aa36.93■■■■□ 3.5
AC135048.1-201ENST00000566056 SYNJ2O15056 1496 aa36.92■■■■□ 3.5
AC135048.1-201ENST00000566056 ERICH3Q5RHP9 1530 aa36.82■■■■□ 3.49
AC135048.1-201ENST00000566056 FHAD1B1AJZ9 1412 aa36.74■■■■□ 3.47
AC135048.1-201ENST00000566056 KIF27Q86VH2 1401 aa36.74■■■■□ 3.47
AC135048.1-201ENST00000566056 ADAMTS12P58397 1594 aa36.67■■■■□ 3.46
AC135048.1-201ENST00000566056 GRIN2AQ12879 1464 aa36.63■■■■□ 3.45
AC135048.1-201ENST00000566056 ARHGEF11O15085 1522 aa36.6■■■■□ 3.45
AC135048.1-201ENST00000566056 CLASP1Q7Z460 1538 aa36.57■■■■□ 3.45
AC135048.1-201ENST00000566056 RIMBP3CA6NJZ7 1639 aa36.57■■■■□ 3.45
AC135048.1-201ENST00000566056 RIMBP3BA6NNM3 1639 aa36.57■■■■□ 3.45
AC135048.1-201ENST00000566056 RIMBP3Q9UFD9 1639 aa36.57■■■■□ 3.45
AC135048.1-201ENST00000566056 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
AC135048.1-201ENST00000566056 IGF1RP08069 1367 aa36.5■■■■□ 3.43
AC135048.1-201ENST00000566056 NUP160Q12769 1436 aa36.47■■■■□ 3.43
AC135048.1-201ENST00000566056 CUL7Q14999 1698 aa36.46■■■■□ 3.43
AC135048.1-201ENST00000566056 CEP170Q5SW79 1584 aa36.35■■■■□ 3.41
AC135048.1-201ENST00000566056 CARMIL1Q5VZK9 1371 aa36.35■■■■□ 3.41
AC135048.1-201ENST00000566056 CYB5RLQ6IPT4 315 aa36.34■■■■□ 3.41
AC135048.1-201ENST00000566056 ARAP1Q96P48 1450 aa36.25■■■■□ 3.39
AC135048.1-201ENST00000566056 JPH4Q96JJ6 628 aa36.19■■■■□ 3.38
AC135048.1-201ENST00000566056 KIAA0586Q9BVV6 1533 aa36.16■■■■□ 3.38
AC135048.1-201ENST00000566056 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms