Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.491e-7■■■■□ 24.2
CSTF2TQ9H0L4 XYLT2-202ENST00000376550 3267 ntTSL 1 (best)11.91□□□□□ -0.51e-7■■■■□ 24.2
CSTF2TQ9H0L4 XYLT2-204ENST00000509778 145 ntTSL 39.82□□□□□ -0.841e-7■■■■□ 24.2
CSTF2TQ9H0L4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.466e-8■■■■□ 24.2
CSTF2TQ9H0L4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.286e-8■■■■□ 24.2
CSTF2TQ9H0L4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.196e-8■■■■□ 24.2
CSTF2TQ9H0L4 FBXO11-204ENST00000424163 560 ntTSL 44.45□□□□□ -1.73e-9■■■■□ 24.2
CSTF2TQ9H0L4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.78■□□□□ 0.282e-7■■■■□ 24.2
CSTF2TQ9H0L4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.018e-8■■■■□ 24.2
CSTF2TQ9H0L4 LONRF1-207ENST00000530693 508 ntTSL 413.57□□□□□ -0.248e-8■■■■□ 24.2
CSTF2TQ9H0L4 NDST1-206ENST00000522491 777 ntTSL 219.43■□□□□ 0.78e-7■■■■□ 24.2
CSTF2TQ9H0L4 RASGRP2-215ENST00000431822 935 ntTSL 518.17■□□□□ 0.53e-7■■■■□ 24.2
CSTF2TQ9H0L4 MAEA-215ENST00000512289 2426 ntTSL 216.48■□□□□ 0.232e-7■■■■□ 24.2
CSTF2TQ9H0L4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.096e-7■■■■□ 24.2
CSTF2TQ9H0L4 CPED1-208ENST00000495036 2198 ntTSL 1 (best)10.69□□□□□ -0.76e-28■■■■□ 24.2
CSTF2TQ9H0L4 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.936e-10■■■■□ 24.2
CSTF2TQ9H0L4 MAEA-209ENST00000506530 5371 ntTSL 218.51■□□□□ 0.552e-7■■■■□ 24.2
CSTF2TQ9H0L4 RANBP3-210ENST00000587463 461 ntTSL 517.24■□□□□ 0.352e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-215ENST00000588879 535 ntTSL 517.24■□□□□ 0.352e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-223ENST00000591736 573 ntTSL 417.24■□□□□ 0.352e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-224ENST00000591881 575 ntTSL 516.32■□□□□ 0.22e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-227ENST00000592266 589 ntTSL 416.32■□□□□ 0.22e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.112e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.052e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-222ENST00000591333 557 ntTSL 415□□□□□ -0.012e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-211ENST00000587479 547 ntTSL 414.87□□□□□ -0.032e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-217ENST00000589886 472 ntTSL 414.41□□□□□ -0.12e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-221ENST00000591124 575 ntTSL 414.23□□□□□ -0.132e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-208ENST00000587263 579 ntTSL 514.11□□□□□ -0.152e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-213ENST00000587956 512 ntTSL 513.28□□□□□ -0.282e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-229ENST00000592771 1937 ntTSL 1 (best)13.17□□□□□ -0.32e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-225ENST00000592133 562 ntTSL 411.69□□□□□ -0.542e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.682e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-228ENST00000592621 818 ntTSL 510.79□□□□□ -0.682e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.732e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-205ENST00000586117 524 ntTSL 410.14□□□□□ -0.792e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-207ENST00000587159 554 ntTSL 59.96□□□□□ -0.822e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-219ENST00000590953 571 ntTSL 39.19□□□□□ -0.942e-7■■■■□ 24.1
CSTF2TQ9H0L4 BMS1P4-203ENST00000580790 1913 ntTSL 1 (best) BASIC9.18□□□□□ -0.943e-6■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-216ENST00000589353 490 ntTSL 59.03□□□□□ -0.962e-7■■■■□ 24.1
CSTF2TQ9H0L4 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.88□□□□□ -1.153e-6■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-218ENST00000590623 786 ntTSL 57.29□□□□□ -1.242e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-204ENST00000585339 566 ntTSL 47.17□□□□□ -1.262e-7■■■■□ 24.1
CSTF2TQ9H0L4 RANBP3-214ENST00000588010 568 ntTSL 55.55□□□□□ -1.522e-7■■■■□ 24.1
CSTF2TQ9H0L4 TFRC-205ENST00000426789 354 ntTSL 34.84□□□□□ -1.634e-11■■■■□ 24.1
CSTF2TQ9H0L4 STK40-208ENST00000482458 900 ntTSL 324.06■■□□□ 1.443e-7■■■■□ 24.1
CSTF2TQ9H0L4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.993e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.932e-6■■■■□ 24.1
CSTF2TQ9H0L4 RBM19-205ENST00000552384 588 ntTSL 319.55■□□□□ 0.723e-7■■■■□ 24.1
CSTF2TQ9H0L4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.89■□□□□ 0.613e-7■■■■□ 24.1
CSTF2TQ9H0L4 STK40-205ENST00000460017 511 ntTSL 518.58■□□□□ 0.563e-7■■■■□ 24.1
CSTF2TQ9H0L4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.53e-7■■■■□ 24.1
CSTF2TQ9H0L4 AC009041.2-208ENST00000563837 705 ntTSL 217.97■□□□□ 0.473e-7■■■■□ 24.1
CSTF2TQ9H0L4 AC009041.2-207ENST00000565069 813 ntTSL 317.91■□□□□ 0.463e-7■■■■□ 24.1
CSTF2TQ9H0L4 NR1D2-202ENST00000383773 3129 ntTSL 1 (best)17.5■□□□□ 0.393e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.23■□□□□ 0.352e-6■■■■□ 24.1
CSTF2TQ9H0L4 AC009041.2-205ENST00000565467 3726 ntTSL 1 (best)17.12■□□□□ 0.333e-7■■■■□ 24.1
CSTF2TQ9H0L4 AHRR-202ENST00000504625 435 ntTSL 317.08■□□□□ 0.323e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-211ENST00000552723 858 ntTSL 516.99■□□□□ 0.312e-6■■■■□ 24.1
CSTF2TQ9H0L4 AHRR-210ENST00000514523 563 ntTSL 416.82■□□□□ 0.283e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.262e-6■■■■□ 24.1
CSTF2TQ9H0L4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.39■□□□□ 0.213e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.162e-6■■■■□ 24.1
CSTF2TQ9H0L4 AC009041.2-203ENST00000562570 3222 ntTSL 1 (best)15.87■□□□□ 0.133e-7■■■■□ 24.1
CSTF2TQ9H0L4 NDUFAF6-218ENST00000523378 949 ntTSL 315.44■□□□□ 0.063e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.022e-6■■■■□ 24.1
CSTF2TQ9H0L4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.09■□□□□ 0.013e-7■■■■□ 24.1
CSTF2TQ9H0L4 AHRR-206ENST00000510400 576 ntTSL 414.85□□□□□ -0.033e-7■■■■□ 24.1
CSTF2TQ9H0L4 ERGIC1-209ENST00000520642 539 ntTSL 414.57□□□□□ -0.083e-7■■■■□ 24.1
CSTF2TQ9H0L4 ATP9B-219ENST00000589951 585 ntTSL 414.42□□□□□ -0.13e-7■■■■□ 24.1
CSTF2TQ9H0L4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.18□□□□□ -0.143e-7■■■■□ 24.1
CSTF2TQ9H0L4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.153e-7■■■■□ 24.1
CSTF2TQ9H0L4 PHF19-213ENST00000487555 1092 ntTSL 1 (best)14.09□□□□□ -0.154e-8■■■■□ 24.1
CSTF2TQ9H0L4 NDUFAF6-208ENST00000519136 816 ntTSL 513.96□□□□□ -0.173e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.78□□□□□ -0.22e-6■■■■□ 24.1
CSTF2TQ9H0L4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.63□□□□□ -0.234e-8■■■■□ 24.1
CSTF2TQ9H0L4 ATP9B-222ENST00000590477 1784 ntTSL 213.49□□□□□ -0.253e-7■■■■□ 24.1
CSTF2TQ9H0L4 ERGIC1-207ENST00000520326 647 ntTSL 513.42□□□□□ -0.263e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.29□□□□□ -0.282e-6■■■■□ 24.1
CSTF2TQ9H0L4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.283e-7■■■■□ 24.1
CSTF2TQ9H0L4 ATP9B-216ENST00000588921 1511 ntTSL 1 (best)12.93□□□□□ -0.343e-7■■■■□ 24.1
CSTF2TQ9H0L4 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.443e-7■■■■□ 24.1
CSTF2TQ9H0L4 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.443e-7■■■■□ 24.1
CSTF2TQ9H0L4 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.473e-7■■■■□ 24.1
CSTF2TQ9H0L4 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.523e-7■■■■□ 24.1
CSTF2TQ9H0L4 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC11.3□□□□□ -0.63e-7■■■■□ 24.1
CSTF2TQ9H0L4 PHF19-211ENST00000474402 578 ntTSL 410.27□□□□□ -0.774e-8■■■■□ 24.1
CSTF2TQ9H0L4 PHF19-205ENST00000439674 556 ntTSL 410.21□□□□□ -0.774e-8■■■■□ 24.1
CSTF2TQ9H0L4 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.833e-7■■■■□ 24.1
CSTF2TQ9H0L4 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.843e-7■■■■□ 24.1
CSTF2TQ9H0L4 PHF19-206ENST00000453868 565 ntTSL 59.46□□□□□ -0.94e-8■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-210ENST00000552456 851 ntTSL 59.33□□□□□ -0.922e-6■■■■□ 24.1
CSTF2TQ9H0L4 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC9.14□□□□□ -0.953e-7■■■■□ 24.1
CSTF2TQ9H0L4 P2RX5-206ENST00000550772 429 ntTSL 38.7□□□□□ -1.022e-6■■■■□ 24.1
CSTF2TQ9H0L4 CD81-205ENST00000475945 606 ntTSL 216.45■□□□□ 0.225e-7■■■■□ 24.1
CSTF2TQ9H0L4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.095e-7■■■■□ 24.1
CSTF2TQ9H0L4 CD81-215ENST00000530648 558 ntTSL 412.71□□□□□ -0.375e-7■■■■□ 24.1
CSTF2TQ9H0L4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.84□□□□□ -1.477e-7■■■■□ 24.1
CSTF2TQ9H0L4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.272e-8■■■■□ 24.1
CSTF2TQ9H0L4 PNCK-217ENST00000460106 586 ntTSL 414.88□□□□□ -0.031e-6■■■■□ 24.1
Retrieved 100 of 19,151 protein–RNA pairs in 215.5 ms