RNA–Protein interactions for RNA: ENST00000588879.5

RANBP3-215, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-215ENST00000588879 NISCHQ9Y2I1 1504 aa45.42■■■■■ 4.86
RANBP3-215ENST00000588879 CCDC180Q9P1Z9 1646 aa40.54■■■■■ 4.08
RANBP3-215ENST00000588879 ABCC9O60706 1549 aa39.85■■■■□ 3.97
RANBP3-215ENST00000588879 RB1CC1Q8TDY2 1594 aa38.27■■■■□ 3.72
RANBP3-215ENST00000588879 NACADO15069 1562 aa38.18■■■■□ 3.7
RANBP3-215ENST00000588879 MYO15BQ96JP2 1530 aa37.92■■■■□ 3.66
RANBP3-215ENST00000588879 DCAF8L2P0C7V8 631 aa37.9■■■■□ 3.66
RANBP3-215ENST00000588879 ZCCHC6Q5VYS8 1495 aaKnown RBP37.78■■■■□ 3.64
RANBP3-215ENST00000588879 DCAF1Q9Y4B6 1507 aa37.63■■■■□ 3.61
RANBP3-215ENST00000588879 UNC13AQ9UPW8 1703 aa37.41■■■■□ 3.58
RANBP3-215ENST00000588879 PABPN1Q86U42 306 aaKnown RBP eCLIP37.16■■■■□ 3.54
RANBP3-215ENST00000588879 BICRAQ9NZM4 1560 aa37.14■■■■□ 3.54
RANBP3-215ENST00000588879 SCRIBQ14160 1630 aa36.88■■■■□ 3.49
RANBP3-215ENST00000588879 DNAJC5BQ9UF47 199 aa36.87■■■■□ 3.49
RANBP3-215ENST00000588879 SHROOM4Q9ULL8 1493 aa36.78■■■■□ 3.48
RANBP3-215ENST00000588879 EIF4G1Q04637 1599 aaKnown RBP36.16■■■■□ 3.38
RANBP3-215ENST00000588879 CC2D2AQ9P2K1 1620 aa36.08■■■■□ 3.37
RANBP3-215ENST00000588879 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
RANBP3-215ENST00000588879 SMARCA4P51532 1647 aa35.3■■■■□ 3.24
RANBP3-215ENST00000588879 NCAPD3P42695 1498 aa35.23■■■■□ 3.23
RANBP3-215ENST00000588879 BAZ1AQ9NRL2 1556 aaPredicted RBP35.21■■■■□ 3.23
RANBP3-215ENST00000588879 ATAD2BQ9ULI0 1458 aa35.18■■■■□ 3.22
RANBP3-215ENST00000588879 SMARCA2P51531 1590 aa35.13■■■■□ 3.21
RANBP3-215ENST00000588879 HMGXB3Q12766 1538 aa35.04■■■■□ 3.2
RANBP3-215ENST00000588879 PEG3Q9GZU2 1588 aa35.02■■■■□ 3.2
RANBP3-215ENST00000588879 MROH2BQ7Z745 1585 aa34.97■■■■□ 3.19
RANBP3-215ENST00000588879 BAZ1BQ9UIG0 1483 aaKnown RBP34.84■■■■□ 3.17
RANBP3-215ENST00000588879 WIZO95785 1651 aa34.57■■■■□ 3.12
RANBP3-215ENST00000588879 RSF1Q96T23 1441 aaPredicted RBP34.47■■■■□ 3.11
RANBP3-215ENST00000588879 NESP48681 1621 aa34.41■■■■□ 3.1
RANBP3-215ENST00000588879 ERCC6Q03468 1493 aa34.36■■■■□ 3.09
RANBP3-215ENST00000588879 LAMC3Q9Y6N6 1575 aa34.34■■■■□ 3.09
RANBP3-215ENST00000588879 TOP2AP11388 1531 aaKnown RBP34.22■■■■□ 3.07
RANBP3-215ENST00000588879 CUX2O14529 1486 aa34.19■■■■□ 3.06
RANBP3-215ENST00000588879 CADPSQ9ULU8 1353 aa34.16■■■■□ 3.06
RANBP3-215ENST00000588879 PDS5BQ9NTI5 1447 aa34.1■■■■□ 3.05
RANBP3-215ENST00000588879 KIF21AQ7Z4S6 1674 aa34.02■■■■□ 3.04
RANBP3-215ENST00000588879 THOC2Q8NI27 1593 aaKnown RBP34.01■■■■□ 3.03
RANBP3-215ENST00000588879 CFTRP13569 1480 aa33.92■■■■□ 3.02
RANBP3-215ENST00000588879 CCDC88BA6NC98 1476 aa33.8■■■■□ 3
RANBP3-215ENST00000588879 MRC2Q9UBG0 1479 aa33.76■■■■□ 3
RANBP3-215ENST00000588879 FANCD2Q9BXW9 1451 aa33.76■■■□□ 2.99
RANBP3-215ENST00000588879 CEP164Q9UPV0 1460 aa33.74■■■□□ 2.99
RANBP3-215ENST00000588879 WDR62O43379 1518 aa33.69■■■□□ 2.98
RANBP3-215ENST00000588879 PRDM2Q13029 1718 aa33.65■■■□□ 2.98
RANBP3-215ENST00000588879 DNAJC5Q9H3Z4 198 aa33.46■■■□□ 2.95
RANBP3-215ENST00000588879 URB2Q14146 1524 aaKnown RBP33.45■■■□□ 2.95
RANBP3-215ENST00000588879 SUPT5HO00267 1087 aaKnown RBP33.25■■■□□ 2.91
RANBP3-215ENST00000588879 ABCC8Q09428 1581 aa33.2■■■□□ 2.91
RANBP3-215ENST00000588879 TOPBP1Q92547 1522 aa33.19■■■□□ 2.9
RANBP3-215ENST00000588879 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
RANBP3-215ENST00000588879 IFT140Q96RY7 1462 aa33.06■■■□□ 2.88
RANBP3-215ENST00000588879 ZNF608Q9ULD9 1512 aaPredicted RBP32.92■■■□□ 2.86
RANBP3-215ENST00000588879 POLA1P09884 1462 aaPredicted RBP32.89■■■□□ 2.86
RANBP3-215ENST00000588879 TARBP1Q13395 1621 aaKnown RBP32.88■■■□□ 2.85
RANBP3-215ENST00000588879 CUX1P39880 1505 aa32.83■■■□□ 2.85
RANBP3-215ENST00000588879 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
RANBP3-215ENST00000588879 FGD5Q6ZNL6 1462 aa32.75■■■□□ 2.83
RANBP3-215ENST00000588879 SOGA1O94964 1423 aa32.73■■■□□ 2.83
RANBP3-215ENST00000588879 RAD54L2Q9Y4B4 1467 aa32.72■■■□□ 2.83
RANBP3-215ENST00000588879 AQRO60306 1485 aaKnown RBP eCLIP32.68■■■□□ 2.827e-8■■■■□ 25.8
RANBP3-215ENST00000588879 OSCARQ8IYS5 282 aa32.67■■■□□ 2.82
RANBP3-215ENST00000588879 WDR97A6NE52 1622 aa32.64■■■□□ 2.82
RANBP3-215ENST00000588879 TDRD9Q8NDG6 1382 aaKnown RBP32.56■■■□□ 2.8
RANBP3-215ENST00000588879 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
RANBP3-215ENST00000588879 WRNQ14191 1432 aaPredicted RBP eCLIP32.5■■■□□ 2.795e-6■■■■■ 29.2
RANBP3-215ENST00000588879 TOP2BQ02880 1626 aa32.49■■■□□ 2.79
RANBP3-215ENST00000588879 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
RANBP3-215ENST00000588879 SYNJ1O43426 1573 aa32.44■■■□□ 2.78
RANBP3-215ENST00000588879 CHD1O14646 1710 aa32.42■■■□□ 2.78
RANBP3-215ENST00000588879 GRIN2BQ13224 1484 aa32.41■■■□□ 2.78
RANBP3-215ENST00000588879 SNAPC4Q5SXM2 1469 aa32.38■■■□□ 2.77
RANBP3-215ENST00000588879 MAGI1Q96QZ7 1491 aaPredicted RBP32.36■■■□□ 2.77
RANBP3-215ENST00000588879 ABCA5Q8WWZ7 1642 aa32.36■■■□□ 2.77
RANBP3-215ENST00000588879 GAPVD1Q14C86 1478 aa32.35■■■□□ 2.77
RANBP3-215ENST00000588879 PBRM1Q86U86 1689 aa32.31■■■□□ 2.76
RANBP3-215ENST00000588879 FBLN2P98095 1184 aa32.27■■■□□ 2.76
RANBP3-215ENST00000588879 SYNJ2O15056 1496 aa32.23■■■□□ 2.75
RANBP3-215ENST00000588879 RIMBP3CA6NJZ7 1639 aa32.2■■■□□ 2.75
RANBP3-215ENST00000588879 RIMBP3BA6NNM3 1639 aa32.2■■■□□ 2.75
RANBP3-215ENST00000588879 RIMBP3Q9UFD9 1639 aa32.2■■■□□ 2.75
RANBP3-215ENST00000588879 CHMP7Q8WUX9 453 aaPredicted RBP32.19■■■□□ 2.74
RANBP3-215ENST00000588879 ARHGEF11O15085 1522 aa32.16■■■□□ 2.74
RANBP3-215ENST00000588879 TRIM41Q8WV44 630 aa32.12■■■□□ 2.73
RANBP3-215ENST00000588879 CLASP1Q7Z460 1538 aa32.1■■■□□ 2.73
RANBP3-215ENST00000588879 ERICH3Q5RHP9 1530 aa32.07■■■□□ 2.72
RANBP3-215ENST00000588879 ADAMTS12P58397 1594 aa32.05■■■□□ 2.72
RANBP3-215ENST00000588879 FHAD1B1AJZ9 1412 aa31.99■■■□□ 2.71
RANBP3-215ENST00000588879 GRIN2AQ12879 1464 aa31.98■■■□□ 2.71
RANBP3-215ENST00000588879 NUP160Q12769 1436 aa31.88■■■□□ 2.69
RANBP3-215ENST00000588879 ARAP1Q96P48 1450 aa31.88■■■□□ 2.69
RANBP3-215ENST00000588879 KIF27Q86VH2 1401 aa31.84■■■□□ 2.69
RANBP3-215ENST00000588879 CEP170Q5SW79 1584 aa31.84■■■□□ 2.69
RANBP3-215ENST00000588879 CYB5RLQ6IPT4 315 aa31.81■■■□□ 2.68
RANBP3-215ENST00000588879 IGF1RP08069 1367 aa31.77■■■□□ 2.68
RANBP3-215ENST00000588879 CUL7Q14999 1698 aa31.71■■■□□ 2.67
RANBP3-215ENST00000588879 SHROOM2Q13796 1616 aa31.7■■■□□ 2.66
RANBP3-215ENST00000588879 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
RANBP3-215ENST00000588879 RUSC2Q8N2Y8 1516 aa31.59■■■□□ 2.65
RANBP3-215ENST00000588879 CARMIL1Q5VZK9 1371 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms