RNA–Protein interactions for RNA: ENST00000383773.8

NR1D2-202, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

TSL 1 (best)

Gene NR1D2, Length 3,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-202ENST00000383773 NISCHQ9Y2I1 1504 aa37.47■■■■□ 3.59
NR1D2-202ENST00000383773 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
NR1D2-202ENST00000383773 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
NR1D2-202ENST00000383773 SHROOM4Q9ULL8 1493 aa31.03■■■□□ 2.56
NR1D2-202ENST00000383773 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
NR1D2-202ENST00000383773 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
NR1D2-202ENST00000383773 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
NR1D2-202ENST00000383773 HRCP23327 699 aa30.78■■■□□ 2.52
NR1D2-202ENST00000383773 ABCC9O60706 1549 aa30.49■■■□□ 2.47
NR1D2-202ENST00000383773 PPARGC1BQ86YN6 1023 aaKnown RBP30.43■■■□□ 2.46
NR1D2-202ENST00000383773 PCGF6Q9BYE7 350 aa30.42■■■□□ 2.46
NR1D2-202ENST00000383773 MYO15BQ96JP2 1530 aa30.34■■■□□ 2.45
NR1D2-202ENST00000383773 NACADO15069 1562 aa30.1■■■□□ 2.41
NR1D2-202ENST00000383773 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
NR1D2-202ENST00000383773 CHIC1Q5VXU3 224 aa30.02■■■□□ 2.4
NR1D2-202ENST00000383773 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
NR1D2-202ENST00000383773 LOC105371045A0A1W2PR82 267 aa29.51■■■□□ 2.32
NR1D2-202ENST00000383773 PELP1Q8IZL8 1130 aaKnown RBP29.35■■■□□ 2.29
NR1D2-202ENST00000383773 UNC13AQ9UPW8 1703 aa29.3■■■□□ 2.28
NR1D2-202ENST00000383773 RSF1Q96T23 1441 aaPredicted RBP29.27■■■□□ 2.28
NR1D2-202ENST00000383773 TRIM26Q12899 539 aaPredicted RBP29.23■■■□□ 2.27
NR1D2-202ENST00000383773 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
NR1D2-202ENST00000383773 SCAF1Q9H7N4 1312 aaKnown RBP29.17■■■□□ 2.26
NR1D2-202ENST00000383773 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
NR1D2-202ENST00000383773 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
NR1D2-202ENST00000383773 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.21
NR1D2-202ENST00000383773 BAZ1AQ9NRL2 1556 aaPredicted RBP28.87■■■□□ 2.21
NR1D2-202ENST00000383773 ZEB1P37275 1124 aaPredicted RBP28.85■■■□□ 2.21
NR1D2-202ENST00000383773 WIZO95785 1651 aa28.83■■■□□ 2.21
NR1D2-202ENST00000383773 SMARCA4P51532 1647 aa28.73■■■□□ 2.19
NR1D2-202ENST00000383773 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
NR1D2-202ENST00000383773 FAM9AQ8IZU1 332 aaPredicted RBP28.56■■■□□ 2.16
NR1D2-202ENST00000383773 TOP2AP11388 1531 aaKnown RBP28.45■■■□□ 2.14
NR1D2-202ENST00000383773 NEUROD1Q13562 356 aa28.43■■■□□ 2.14
NR1D2-202ENST00000383773 ACIN1Q9UKV3 1341 aaKnown RBP28.4■■■□□ 2.14
NR1D2-202ENST00000383773 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
NR1D2-202ENST00000383773 PEG3Q9GZU2 1588 aa28.31■■■□□ 2.12
NR1D2-202ENST00000383773 GTF3C3Q9Y5Q9 886 aa28.29■■■□□ 2.12
NR1D2-202ENST00000383773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.24■■■□□ 2.11
NR1D2-202ENST00000383773 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
NR1D2-202ENST00000383773 CCDC88BA6NC98 1476 aa28.23■■■□□ 2.11
NR1D2-202ENST00000383773 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
NR1D2-202ENST00000383773 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
NR1D2-202ENST00000383773 CCER1Q8TC90 406 aaPredicted RBP28.14■■■□□ 2.09
NR1D2-202ENST00000383773 MYT1Q01538 1121 aa28.07■■■□□ 2.08
NR1D2-202ENST00000383773 CENPBP07199 599 aaPredicted RBP28.06■■■□□ 2.08
NR1D2-202ENST00000383773 DIEXFQ68CQ4 756 aaKnown RBP28.05■■■□□ 2.08
NR1D2-202ENST00000383773 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
NR1D2-202ENST00000383773 TTBK1Q5TCY1 1321 aaPredicted RBP27.91■■■□□ 2.06
NR1D2-202ENST00000383773 YTHDC1Q96MU7 727 aaKnown RBP27.84■■■□□ 2.05
NR1D2-202ENST00000383773 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
NR1D2-202ENST00000383773 NCAPD3P42695 1498 aa27.82■■■□□ 2.04
NR1D2-202ENST00000383773 HMGXB3Q12766 1538 aa27.79■■■□□ 2.04
NR1D2-202ENST00000383773 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
NR1D2-202ENST00000383773 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
NR1D2-202ENST00000383773 ZNF316A6NFI3 1004 aaPredicted RBP27.45■■□□□ 1.98
NR1D2-202ENST00000383773 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
NR1D2-202ENST00000383773 SOGA1O94964 1423 aa27.38■■□□□ 1.97
NR1D2-202ENST00000383773 MIER1Q8N108 512 aa27.37■■□□□ 1.97
NR1D2-202ENST00000383773 CFTRP13569 1480 aa27.34■■□□□ 1.97
NR1D2-202ENST00000383773 RUSC2Q8N2Y8 1516 aa27.29■■□□□ 1.96
NR1D2-202ENST00000383773 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
NR1D2-202ENST00000383773 EEA1Q15075 1411 aa27.21■■□□□ 1.95
NR1D2-202ENST00000383773 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
NR1D2-202ENST00000383773 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
NR1D2-202ENST00000383773 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
NR1D2-202ENST00000383773 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.93
NR1D2-202ENST00000383773 CUX1P39880 1505 aa27.11■■□□□ 1.93
NR1D2-202ENST00000383773 HNRNPUL2Q1KMD3 747 aaKnown RBP27.08■■□□□ 1.93
NR1D2-202ENST00000383773 CEP162Q5TB80 1403 aa27.04■■□□□ 1.92
NR1D2-202ENST00000383773 UBTFP17480 764 aaKnown RBP26.96■■□□□ 1.91
NR1D2-202ENST00000383773 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
NR1D2-202ENST00000383773 DNAJC5BQ9UF47 199 aa26.93■■□□□ 1.9
NR1D2-202ENST00000383773 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
NR1D2-202ENST00000383773 NESP48681 1621 aa26.92■■□□□ 1.9
NR1D2-202ENST00000383773 KIF21BO75037 1637 aa26.9■■□□□ 1.9
NR1D2-202ENST00000383773 FANCD2Q9BXW9 1451 aa26.89■■□□□ 1.89
NR1D2-202ENST00000383773 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
NR1D2-202ENST00000383773 SUPT16HQ9Y5B9 1047 aaKnown RBP26.87■■□□□ 1.89
NR1D2-202ENST00000383773 LAMC3Q9Y6N6 1575 aa26.79■■□□□ 1.88
NR1D2-202ENST00000383773 RAPGEF2Q9Y4G8 1499 aa26.78■■□□□ 1.88
NR1D2-202ENST00000383773 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
NR1D2-202ENST00000383773 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
NR1D2-202ENST00000383773 TSHZ2Q9NRE2 1034 aa26.72■■□□□ 1.87
NR1D2-202ENST00000383773 ANP32EQ9BTT0 268 aa26.69■■□□□ 1.86
NR1D2-202ENST00000383773 PRXQ9BXM0 1461 aa26.69■■□□□ 1.86
NR1D2-202ENST00000383773 DNMBPQ6XZF7 1577 aa26.68■■□□□ 1.86
NR1D2-202ENST00000383773 BCL11AQ9H165 835 aa26.65■■□□□ 1.86
NR1D2-202ENST00000383773 TOPBP1Q92547 1522 aa26.64■■□□□ 1.86
NR1D2-202ENST00000383773 CUX2O14529 1486 aa26.64■■□□□ 1.85
NR1D2-202ENST00000383773 ERICH3Q5RHP9 1530 aa26.63■■□□□ 1.85
NR1D2-202ENST00000383773 RANGAP1P46060 587 aaPredicted RBP26.63■■□□□ 1.85
NR1D2-202ENST00000383773 BCANQ96GW7 911 aa26.59■■□□□ 1.85
NR1D2-202ENST00000383773 PDS5BQ9NTI5 1447 aa26.58■■□□□ 1.85
NR1D2-202ENST00000383773 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
NR1D2-202ENST00000383773 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
NR1D2-202ENST00000383773 CLIP1P30622 1438 aa26.54■■□□□ 1.84
NR1D2-202ENST00000383773 KIF21AQ7Z4S6 1674 aa26.53■■□□□ 1.84
NR1D2-202ENST00000383773 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
NR1D2-202ENST00000383773 IGF1RP08069 1367 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms