RNA–Protein interactions for RNA: ENST00000487555.5

PHF19-213, Transcript of PHD finger protein 19, humanhuman

TSL 1 (best)

Gene PHF19, Length 1,092 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-213ENST00000487555 NISCHQ9Y2I1 1504 aa37.4■■■■□ 3.58
PHF19-213ENST00000487555 CCDC180Q9P1Z9 1646 aa33.51■■■□□ 2.96
PHF19-213ENST00000487555 ABCC9O60706 1549 aa33.32■■■□□ 2.92
PHF19-213ENST00000487555 RB1CC1Q8TDY2 1594 aa31.8■■■□□ 2.68
PHF19-213ENST00000487555 NACADO15069 1562 aa31.64■■■□□ 2.65
PHF19-213ENST00000487555 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
PHF19-213ENST00000487555 MYO15BQ96JP2 1530 aa31.28■■■□□ 2.6
PHF19-213ENST00000487555 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
PHF19-213ENST00000487555 DNAJC5BQ9UF47 199 aa31.12■■■□□ 2.57
PHF19-213ENST00000487555 ZCCHC6Q5VYS8 1495 aaKnown RBP31.05■■■□□ 2.56
PHF19-213ENST00000487555 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
PHF19-213ENST00000487555 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
PHF19-213ENST00000487555 BICRAQ9NZM4 1560 aa30.9■■■□□ 2.54
PHF19-213ENST00000487555 SCRIBQ14160 1630 aa30.51■■■□□ 2.48
PHF19-213ENST00000487555 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
PHF19-213ENST00000487555 CC2D2AQ9P2K1 1620 aa30.13■■■□□ 2.41
PHF19-213ENST00000487555 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
PHF19-213ENST00000487555 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
PHF19-213ENST00000487555 NCAPD3P42695 1498 aa29.21■■■□□ 2.27
PHF19-213ENST00000487555 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
PHF19-213ENST00000487555 ATAD2BQ9ULI0 1458 aa29.13■■■□□ 2.25
PHF19-213ENST00000487555 SMARCA2P51531 1590 aa29.05■■■□□ 2.24
PHF19-213ENST00000487555 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
PHF19-213ENST00000487555 HMGXB3Q12766 1538 aa29.01■■■□□ 2.23
PHF19-213ENST00000487555 PEG3Q9GZU2 1588 aa28.9■■■□□ 2.22
PHF19-213ENST00000487555 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
PHF19-213ENST00000487555 MROH2BQ7Z745 1585 aa28.82■■■□□ 2.2
PHF19-213ENST00000487555 ERCC6Q03468 1493 aa28.73■■■□□ 2.19
PHF19-213ENST00000487555 NESP48681 1621 aa28.68■■■□□ 2.18
PHF19-213ENST00000487555 CUX2O14529 1486 aa28.67■■■□□ 2.18
PHF19-213ENST00000487555 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
PHF19-213ENST00000487555 WIZO95785 1651 aa28.48■■■□□ 2.15
PHF19-213ENST00000487555 DNAJC5Q9H3Z4 198 aa28.45■■■□□ 2.14
PHF19-213ENST00000487555 THOC2Q8NI27 1593 aaKnown RBP28.39■■■□□ 2.14
PHF19-213ENST00000487555 KIF21AQ7Z4S6 1674 aa28.33■■■□□ 2.13
PHF19-213ENST00000487555 PDS5BQ9NTI5 1447 aa28.32■■■□□ 2.12
PHF19-213ENST00000487555 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
PHF19-213ENST00000487555 RSF1Q96T23 1441 aaPredicted RBP28.27■■■□□ 2.12
PHF19-213ENST00000487555 TOP2AP11388 1531 aaKnown RBP28.14■■■□□ 2.1
PHF19-213ENST00000487555 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
PHF19-213ENST00000487555 WDR62O43379 1518 aa28.03■■■□□ 2.08
PHF19-213ENST00000487555 CFTRP13569 1480 aa28.03■■■□□ 2.08
PHF19-213ENST00000487555 FANCD2Q9BXW9 1451 aa27.99■■■□□ 2.07
PHF19-213ENST00000487555 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
PHF19-213ENST00000487555 CCDC88BA6NC98 1476 aa27.8■■■□□ 2.04
PHF19-213ENST00000487555 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
PHF19-213ENST00000487555 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
PHF19-213ENST00000487555 TOPBP1Q92547 1522 aa27.48■■□□□ 1.99
PHF19-213ENST00000487555 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
PHF19-213ENST00000487555 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
PHF19-213ENST00000487555 DNMBPQ6XZF7 1577 aa27.39■■□□□ 1.98
PHF19-213ENST00000487555 ZNF608Q9ULD9 1512 aaPredicted RBP27.38■■□□□ 1.97
PHF19-213ENST00000487555 OSCARQ8IYS5 282 aa27.33■■□□□ 1.97
PHF19-213ENST00000487555 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.95
PHF19-213ENST00000487555 TARBP1Q13395 1621 aaKnown RBP27.24■■□□□ 1.95
PHF19-213ENST00000487555 POLA1P09884 1462 aaPredicted RBP27.21■■□□□ 1.95
PHF19-213ENST00000487555 TRIM41Q8WV44 630 aa27.21■■□□□ 1.95
PHF19-213ENST00000487555 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.931e-7■■■■■ 30.5
PHF19-213ENST00000487555 RAD54L2Q9Y4B4 1467 aa27.09■■□□□ 1.93
PHF19-213ENST00000487555 CUX1P39880 1505 aa27.07■■□□□ 1.92
PHF19-213ENST00000487555 SOGA1O94964 1423 aa27.06■■□□□ 1.92
PHF19-213ENST00000487555 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
PHF19-213ENST00000487555 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
PHF19-213ENST00000487555 CHD1O14646 1710 aa27.02■■□□□ 1.92
PHF19-213ENST00000487555 RIMBP3CA6NJZ7 1639 aa27.01■■□□□ 1.92
PHF19-213ENST00000487555 RIMBP3BA6NNM3 1639 aa27.01■■□□□ 1.92
PHF19-213ENST00000487555 RIMBP3Q9UFD9 1639 aa27.01■■□□□ 1.92
PHF19-213ENST00000487555 TDRD9Q8NDG6 1382 aaKnown RBP26.98■■□□□ 1.91
PHF19-213ENST00000487555 WDR97A6NE52 1622 aa26.98■■□□□ 1.91
PHF19-213ENST00000487555 ARHGEF11O15085 1522 aa26.95■■□□□ 1.91
PHF19-213ENST00000487555 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
PHF19-213ENST00000487555 FBLN2P98095 1184 aa26.86■■□□□ 1.89
PHF19-213ENST00000487555 GRIN2BQ13224 1484 aa26.82■■□□□ 1.88
PHF19-213ENST00000487555 MAGI1Q96QZ7 1491 aaPredicted RBP26.82■■□□□ 1.88
PHF19-213ENST00000487555 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
PHF19-213ENST00000487555 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
PHF19-213ENST00000487555 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
PHF19-213ENST00000487555 ABCA5Q8WWZ7 1642 aa26.73■■□□□ 1.87
PHF19-213ENST00000487555 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
PHF19-213ENST00000487555 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
PHF19-213ENST00000487555 CHMP7Q8WUX9 453 aaPredicted RBP26.71■■□□□ 1.87
PHF19-213ENST00000487555 ARAP1Q96P48 1450 aa26.7■■□□□ 1.87
PHF19-213ENST00000487555 SYNJ1O43426 1573 aa26.69■■□□□ 1.86
PHF19-213ENST00000487555 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
PHF19-213ENST00000487555 CYB5RLQ6IPT4 315 aa26.68■■□□□ 1.86
PHF19-213ENST00000487555 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
PHF19-213ENST00000487555 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
PHF19-213ENST00000487555 ADAMTS12P58397 1594 aa26.51■■□□□ 1.83
PHF19-213ENST00000487555 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
PHF19-213ENST00000487555 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
PHF19-213ENST00000487555 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
PHF19-213ENST00000487555 NUP160Q12769 1436 aa26.41■■□□□ 1.82
PHF19-213ENST00000487555 CEP170Q5SW79 1584 aa26.41■■□□□ 1.82
PHF19-213ENST00000487555 ERCC6L2Q5T890 1561 aa26.31■■□□□ 1.8
PHF19-213ENST00000487555 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
PHF19-213ENST00000487555 SHROOM2Q13796 1616 aa26.29■■□□□ 1.8
PHF19-213ENST00000487555 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.78
PHF19-213ENST00000487555 KIF27Q86VH2 1401 aa26.14■■□□□ 1.77
PHF19-213ENST00000487555 IGF1RP08069 1367 aa26.11■■□□□ 1.77
PHF19-213ENST00000487555 PRG4Q92954 1404 aaPredicted RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms