RNA–Protein interactions for RNA: ENST00000588921.1

ATP9B-216, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 1 (best)

Gene ATP9B, Length 1,511 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-216ENST00000588921 NISCHQ9Y2I1 1504 aa33.34■■■□□ 2.93
ATP9B-216ENST00000588921 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
ATP9B-216ENST00000588921 ABCC9O60706 1549 aa28.9■■■□□ 2.22
ATP9B-216ENST00000588921 RB1CC1Q8TDY2 1594 aa27.93■■■□□ 2.06
ATP9B-216ENST00000588921 NACADO15069 1562 aa27.91■■■□□ 2.06
ATP9B-216ENST00000588921 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
ATP9B-216ENST00000588921 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
ATP9B-216ENST00000588921 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
ATP9B-216ENST00000588921 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.02
ATP9B-216ENST00000588921 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
ATP9B-216ENST00000588921 SCRIBQ14160 1630 aa27.03■■□□□ 1.92
ATP9B-216ENST00000588921 PABPN1Q86U42 306 aaKnown RBP eCLIP26.98■■□□□ 1.91
ATP9B-216ENST00000588921 BICRAQ9NZM4 1560 aa26.94■■□□□ 1.9
ATP9B-216ENST00000588921 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
ATP9B-216ENST00000588921 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
ATP9B-216ENST00000588921 EIF4G1Q04637 1599 aaKnown RBP26.3■■□□□ 1.8
ATP9B-216ENST00000588921 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
ATP9B-216ENST00000588921 CECR2Q9BXF3 1484 aa26■■□□□ 1.75
ATP9B-216ENST00000588921 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
ATP9B-216ENST00000588921 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
ATP9B-216ENST00000588921 SMARCA2P51531 1590 aa25.75■■□□□ 1.71
ATP9B-216ENST00000588921 ATAD2BQ9ULI0 1458 aa25.7■■□□□ 1.7
ATP9B-216ENST00000588921 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
ATP9B-216ENST00000588921 MROH2BQ7Z745 1585 aa25.64■■□□□ 1.7
ATP9B-216ENST00000588921 PEG3Q9GZU2 1588 aa25.63■■□□□ 1.69
ATP9B-216ENST00000588921 HMGXB3Q12766 1538 aa25.6■■□□□ 1.69
ATP9B-216ENST00000588921 BAZ1BQ9UIG0 1483 aaKnown RBP25.55■■□□□ 1.68
ATP9B-216ENST00000588921 WIZO95785 1651 aa25.4■■□□□ 1.66
ATP9B-216ENST00000588921 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.65
ATP9B-216ENST00000588921 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
ATP9B-216ENST00000588921 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
ATP9B-216ENST00000588921 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
ATP9B-216ENST00000588921 NESP48681 1621 aa24.98■■□□□ 1.59
ATP9B-216ENST00000588921 CADPSQ9ULU8 1353 aa24.96■■□□□ 1.59
ATP9B-216ENST00000588921 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
ATP9B-216ENST00000588921 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
ATP9B-216ENST00000588921 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
ATP9B-216ENST00000588921 CFTRP13569 1480 aa24.81■■□□□ 1.56
ATP9B-216ENST00000588921 KIF21AQ7Z4S6 1674 aa24.77■■□□□ 1.56
ATP9B-216ENST00000588921 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
ATP9B-216ENST00000588921 CUX2O14529 1486 aa24.71■■□□□ 1.55
ATP9B-216ENST00000588921 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
ATP9B-216ENST00000588921 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
ATP9B-216ENST00000588921 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
ATP9B-216ENST00000588921 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
ATP9B-216ENST00000588921 WDR62O43379 1518 aa24.5■■□□□ 1.51
ATP9B-216ENST00000588921 ABCC8Q09428 1581 aa24.39■■□□□ 1.49
ATP9B-216ENST00000588921 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
ATP9B-216ENST00000588921 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
ATP9B-216ENST00000588921 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
ATP9B-216ENST00000588921 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
ATP9B-216ENST00000588921 CUX1P39880 1505 aa24.07■■□□□ 1.44
ATP9B-216ENST00000588921 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
ATP9B-216ENST00000588921 FGD5Q6ZNL6 1462 aa24.02■■□□□ 1.44
ATP9B-216ENST00000588921 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
ATP9B-216ENST00000588921 SOGA1O94964 1423 aa23.99■■□□□ 1.43
ATP9B-216ENST00000588921 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
ATP9B-216ENST00000588921 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
ATP9B-216ENST00000588921 BIVM-ERCC5R4GMW8 1640 aa23.94■■□□□ 1.42
ATP9B-216ENST00000588921 ZNF608Q9ULD9 1512 aaPredicted RBP23.93■■□□□ 1.42
ATP9B-216ENST00000588921 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
ATP9B-216ENST00000588921 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
ATP9B-216ENST00000588921 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
ATP9B-216ENST00000588921 SYNJ1O43426 1573 aa23.88■■□□□ 1.41
ATP9B-216ENST00000588921 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.4
ATP9B-216ENST00000588921 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
ATP9B-216ENST00000588921 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
ATP9B-216ENST00000588921 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
ATP9B-216ENST00000588921 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
ATP9B-216ENST00000588921 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
ATP9B-216ENST00000588921 ABCA5Q8WWZ7 1642 aa23.69■■□□□ 1.38
ATP9B-216ENST00000588921 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
ATP9B-216ENST00000588921 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
ATP9B-216ENST00000588921 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
ATP9B-216ENST00000588921 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
ATP9B-216ENST00000588921 CHD1O14646 1710 aa23.61■■□□□ 1.37
ATP9B-216ENST00000588921 FBLN2P98095 1184 aa23.6■■□□□ 1.37
ATP9B-216ENST00000588921 CHMP7Q8WUX9 453 aaPredicted RBP23.58■■□□□ 1.36
ATP9B-216ENST00000588921 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
ATP9B-216ENST00000588921 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
ATP9B-216ENST00000588921 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
ATP9B-216ENST00000588921 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
ATP9B-216ENST00000588921 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
ATP9B-216ENST00000588921 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
ATP9B-216ENST00000588921 CUL7Q14999 1698 aa23.39■■□□□ 1.34
ATP9B-216ENST00000588921 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
ATP9B-216ENST00000588921 IGF1RP08069 1367 aa23.34■■□□□ 1.33
ATP9B-216ENST00000588921 CLASP1Q7Z460 1538 aa23.32■■□□□ 1.32
ATP9B-216ENST00000588921 NUP160Q12769 1436 aa23.27■■□□□ 1.32
ATP9B-216ENST00000588921 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
ATP9B-216ENST00000588921 CARMIL1Q5VZK9 1371 aa23.26■■□□□ 1.31
ATP9B-216ENST00000588921 RIMBP3CA6NJZ7 1639 aa23.25■■□□□ 1.31
ATP9B-216ENST00000588921 RIMBP3BA6NNM3 1639 aa23.25■■□□□ 1.31
ATP9B-216ENST00000588921 RIMBP3Q9UFD9 1639 aa23.25■■□□□ 1.31
ATP9B-216ENST00000588921 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
ATP9B-216ENST00000588921 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
ATP9B-216ENST00000588921 EEA1Q15075 1411 aa23.16■■□□□ 1.3
ATP9B-216ENST00000588921 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
ATP9B-216ENST00000588921 RAPGEF2Q9Y4G8 1499 aa23.14■■□□□ 1.3
ATP9B-216ENST00000588921 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms