RNA–Protein interactions for RNA: ENST00000591736.5

RANBP3-223, Transcript of RAN binding protein 3, human

TSL 4

Gene RANBP3, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-223	ENST00000591736	NISCH	Q9Y2I1	1504 aa		45.42	■■■■■ 4.86
RANBP3-223	ENST00000591736	CCDC180	Q9P1Z9	1646 aa		40.54	■■■■■ 4.08
RANBP3-223	ENST00000591736	ABCC9	O60706	1549 aa		39.85	■■■■□ 3.97
RANBP3-223	ENST00000591736	RB1CC1	Q8TDY2	1594 aa		38.27	■■■■□ 3.72
RANBP3-223	ENST00000591736	NACAD	O15069	1562 aa		38.18	■■■■□ 3.7
RANBP3-223	ENST00000591736	MYO15B	Q96JP2	1530 aa		37.92	■■■■□ 3.66
RANBP3-223	ENST00000591736	DCAF8L2	P0C7V8	631 aa		37.9	■■■■□ 3.66
RANBP3-223	ENST00000591736	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.78	■■■■□ 3.64
RANBP3-223	ENST00000591736	DCAF1	Q9Y4B6	1507 aa		37.63	■■■■□ 3.61
RANBP3-223	ENST00000591736	UNC13A	Q9UPW8	1703 aa		37.41	■■■■□ 3.58
RANBP3-223	ENST00000591736	PABPN1	Q86U42	306 aa	Known RBP eCLIP	37.16	■■■■□ 3.54	7e-7	■□□□□ 8.1
RANBP3-223	ENST00000591736	BICRA	Q9NZM4	1560 aa		37.14	■■■■□ 3.54
RANBP3-223	ENST00000591736	SCRIB	Q14160	1630 aa		36.88	■■■■□ 3.49
RANBP3-223	ENST00000591736	DNAJC5B	Q9UF47	199 aa		36.87	■■■■□ 3.49
RANBP3-223	ENST00000591736	SHROOM4	Q9ULL8	1493 aa		36.78	■■■■□ 3.48
RANBP3-223	ENST00000591736	EIF4G1	Q04637	1599 aa	Known RBP	36.16	■■■■□ 3.38
RANBP3-223	ENST00000591736	CC2D2A	Q9P2K1	1620 aa		36.08	■■■■□ 3.37
RANBP3-223	ENST00000591736	CECR2	Q9BXF3	1484 aa		35.87	■■■■□ 3.33
RANBP3-223	ENST00000591736	SMARCA4	P51532	1647 aa		35.3	■■■■□ 3.24
RANBP3-223	ENST00000591736	NCAPD3	P42695	1498 aa		35.23	■■■■□ 3.23
RANBP3-223	ENST00000591736	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.21	■■■■□ 3.23
RANBP3-223	ENST00000591736	ATAD2B	Q9ULI0	1458 aa		35.18	■■■■□ 3.22
RANBP3-223	ENST00000591736	SMARCA2	P51531	1590 aa		35.13	■■■■□ 3.21
RANBP3-223	ENST00000591736	HMGXB3	Q12766	1538 aa		35.04	■■■■□ 3.2
RANBP3-223	ENST00000591736	PEG3	Q9GZU2	1588 aa		35.02	■■■■□ 3.2
RANBP3-223	ENST00000591736	MROH2B	Q7Z745	1585 aa		34.97	■■■■□ 3.19
RANBP3-223	ENST00000591736	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.84	■■■■□ 3.17
RANBP3-223	ENST00000591736	WIZ	O95785	1651 aa		34.57	■■■■□ 3.12
RANBP3-223	ENST00000591736	RSF1	Q96T23	1441 aa	Predicted RBP	34.47	■■■■□ 3.11
RANBP3-223	ENST00000591736	NES	P48681	1621 aa		34.41	■■■■□ 3.1
RANBP3-223	ENST00000591736	ERCC6	Q03468	1493 aa		34.36	■■■■□ 3.09
RANBP3-223	ENST00000591736	LAMC3	Q9Y6N6	1575 aa		34.34	■■■■□ 3.09
RANBP3-223	ENST00000591736	TOP2A	P11388	1531 aa	Known RBP	34.22	■■■■□ 3.07
RANBP3-223	ENST00000591736	CUX2	O14529	1486 aa		34.19	■■■■□ 3.06
RANBP3-223	ENST00000591736	CADPS	Q9ULU8	1353 aa		34.16	■■■■□ 3.06
RANBP3-223	ENST00000591736	PDS5B	Q9NTI5	1447 aa		34.1	■■■■□ 3.05
RANBP3-223	ENST00000591736	KIF21A	Q7Z4S6	1674 aa		34.02	■■■■□ 3.04
RANBP3-223	ENST00000591736	THOC2	Q8NI27	1593 aa	Known RBP	34.01	■■■■□ 3.03
RANBP3-223	ENST00000591736	CFTR	P13569	1480 aa		33.92	■■■■□ 3.02
RANBP3-223	ENST00000591736	CCDC88B	A6NC98	1476 aa		33.8	■■■■□ 3
RANBP3-223	ENST00000591736	MRC2	Q9UBG0	1479 aa		33.76	■■■■□ 3
RANBP3-223	ENST00000591736	FANCD2	Q9BXW9	1451 aa		33.76	■■■□□ 2.99
RANBP3-223	ENST00000591736	CEP164	Q9UPV0	1460 aa		33.74	■■■□□ 2.99
RANBP3-223	ENST00000591736	WDR62	O43379	1518 aa		33.69	■■■□□ 2.98
RANBP3-223	ENST00000591736	PRDM2	Q13029	1718 aa		33.65	■■■□□ 2.98
RANBP3-223	ENST00000591736	DNAJC5	Q9H3Z4	198 aa		33.46	■■■□□ 2.95
RANBP3-223	ENST00000591736	URB2	Q14146	1524 aa	Known RBP	33.45	■■■□□ 2.95
RANBP3-223	ENST00000591736	SUPT5H	O00267	1087 aa	Known RBP	33.25	■■■□□ 2.91
RANBP3-223	ENST00000591736	ABCC8	Q09428	1581 aa		33.2	■■■□□ 2.91
RANBP3-223	ENST00000591736	TOPBP1	Q92547	1522 aa		33.19	■■■□□ 2.9
RANBP3-223	ENST00000591736	DNMBP	Q6XZF7	1577 aa		33.14	■■■□□ 2.9
RANBP3-223	ENST00000591736	IFT140	Q96RY7	1462 aa		33.06	■■■□□ 2.88
RANBP3-223	ENST00000591736	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.92	■■■□□ 2.86
RANBP3-223	ENST00000591736	POLA1	P09884	1462 aa	Predicted RBP	32.89	■■■□□ 2.86
RANBP3-223	ENST00000591736	TARBP1	Q13395	1621 aa	Known RBP	32.88	■■■□□ 2.85
RANBP3-223	ENST00000591736	CUX1	P39880	1505 aa		32.83	■■■□□ 2.85
RANBP3-223	ENST00000591736	EIF4G3	O43432	1585 aa	Known RBP	32.79	■■■□□ 2.84
RANBP3-223	ENST00000591736	FGD5	Q6ZNL6	1462 aa		32.75	■■■□□ 2.83
RANBP3-223	ENST00000591736	SOGA1	O94964	1423 aa		32.73	■■■□□ 2.83
RANBP3-223	ENST00000591736	RAD54L2	Q9Y4B4	1467 aa		32.72	■■■□□ 2.83
RANBP3-223	ENST00000591736	AQR	O60306	1485 aa	Known RBP eCLIP	32.68	■■■□□ 2.82	6e-8	■■■■□ 25.4
RANBP3-223	ENST00000591736	OSCAR	Q8IYS5	282 aa		32.67	■■■□□ 2.82
RANBP3-223	ENST00000591736	WDR97	A6NE52	1622 aa		32.64	■■■□□ 2.82
RANBP3-223	ENST00000591736	TDRD9	Q8NDG6	1382 aa	Known RBP	32.56	■■■□□ 2.8
RANBP3-223	ENST00000591736	BIVM-ERCC5	R4GMW8	1640 aa		32.5	■■■□□ 2.79
RANBP3-223	ENST00000591736	WRN	Q14191	1432 aa	Predicted RBP eCLIP	32.5	■■■□□ 2.79	5e-6	■■■■■ 29.2
RANBP3-223	ENST00000591736	TOP2B	Q02880	1626 aa		32.49	■■■□□ 2.79
RANBP3-223	ENST00000591736	ABCA10	Q8WWZ4	1543 aa		32.46	■■■□□ 2.79
RANBP3-223	ENST00000591736	SYNJ1	O43426	1573 aa		32.44	■■■□□ 2.78
RANBP3-223	ENST00000591736	CHD1	O14646	1710 aa		32.42	■■■□□ 2.78
RANBP3-223	ENST00000591736	GRIN2B	Q13224	1484 aa		32.41	■■■□□ 2.78
RANBP3-223	ENST00000591736	SNAPC4	Q5SXM2	1469 aa		32.38	■■■□□ 2.77
RANBP3-223	ENST00000591736	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.36	■■■□□ 2.77
RANBP3-223	ENST00000591736	ABCA5	Q8WWZ7	1642 aa		32.36	■■■□□ 2.77
RANBP3-223	ENST00000591736	GAPVD1	Q14C86	1478 aa		32.35	■■■□□ 2.77
RANBP3-223	ENST00000591736	PBRM1	Q86U86	1689 aa		32.31	■■■□□ 2.76
RANBP3-223	ENST00000591736	FBLN2	P98095	1184 aa		32.27	■■■□□ 2.76
RANBP3-223	ENST00000591736	SYNJ2	O15056	1496 aa		32.23	■■■□□ 2.75
RANBP3-223	ENST00000591736	RIMBP3C	A6NJZ7	1639 aa		32.2	■■■□□ 2.75
RANBP3-223	ENST00000591736	RIMBP3B	A6NNM3	1639 aa		32.2	■■■□□ 2.75
RANBP3-223	ENST00000591736	RIMBP3	Q9UFD9	1639 aa		32.2	■■■□□ 2.75
RANBP3-223	ENST00000591736	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.19	■■■□□ 2.74
RANBP3-223	ENST00000591736	ARHGEF11	O15085	1522 aa		32.16	■■■□□ 2.74
RANBP3-223	ENST00000591736	TRIM41	Q8WV44	630 aa		32.12	■■■□□ 2.73
RANBP3-223	ENST00000591736	CLASP1	Q7Z460	1538 aa		32.1	■■■□□ 2.73
RANBP3-223	ENST00000591736	ERICH3	Q5RHP9	1530 aa		32.07	■■■□□ 2.72
RANBP3-223	ENST00000591736	ADAMTS12	P58397	1594 aa		32.05	■■■□□ 2.72
RANBP3-223	ENST00000591736	FHAD1	B1AJZ9	1412 aa		31.99	■■■□□ 2.71
RANBP3-223	ENST00000591736	GRIN2A	Q12879	1464 aa		31.98	■■■□□ 2.71
RANBP3-223	ENST00000591736	NUP160	Q12769	1436 aa		31.88	■■■□□ 2.69
RANBP3-223	ENST00000591736	ARAP1	Q96P48	1450 aa		31.88	■■■□□ 2.69
RANBP3-223	ENST00000591736	KIF27	Q86VH2	1401 aa		31.84	■■■□□ 2.69
RANBP3-223	ENST00000591736	CEP170	Q5SW79	1584 aa		31.84	■■■□□ 2.69
RANBP3-223	ENST00000591736	CYB5RL	Q6IPT4	315 aa		31.81	■■■□□ 2.68
RANBP3-223	ENST00000591736	IGF1R	P08069	1367 aa		31.77	■■■□□ 2.68
RANBP3-223	ENST00000591736	CUL7	Q14999	1698 aa		31.71	■■■□□ 2.67
RANBP3-223	ENST00000591736	SHROOM2	Q13796	1616 aa		31.7	■■■□□ 2.66
RANBP3-223	ENST00000591736	ERCC6L2	Q5T890	1561 aa		31.6	■■■□□ 2.65
RANBP3-223	ENST00000591736	RUSC2	Q8N2Y8	1516 aa		31.59	■■■□□ 2.65
RANBP3-223	ENST00000591736	CARMIL1	Q5VZK9	1371 aa		31.55	■■■□□ 2.64

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