Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 APLP2-219ENST00000533616 2041 ntTSL 215.58■□□□□ 0.095e-13■■■■□ 20
SRSF1Q07955 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.89□□□□□ -0.195e-13■■■■□ 20
SRSF1Q07955 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.655e-13■■■■□ 20
SRSF1Q07955 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.755e-13■■■■□ 20
SRSF1Q07955 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.85e-13■■■■□ 20
SRSF1Q07955 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.566e-8■■■■□ 19.9
SRSF1Q07955 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.176e-8■■■■□ 19.9
SRSF1Q07955 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC7.38□□□□□ -1.236e-8■■■■□ 19.9
SRSF1Q07955 AEBP2-206ENST00000538425 518 ntAPPRIS ALT2 TSL 46.09□□□□□ -1.436e-8■■■■□ 19.9
SRSF1Q07955 IDI1-203ENST00000429642 1017 ntTSL 520.77■□□□□ 0.921e-11■■■■□ 19.9
SRSF1Q07955 IDI1-205ENST00000491735 1066 ntTSL 1 (best)17.75■□□□□ 0.431e-11■■■■□ 19.9
SRSF1Q07955 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.261e-11■■■■□ 19.9
SRSF1Q07955 IDI1-204ENST00000482091 1029 ntTSL 514.69□□□□□ -0.061e-11■■■■□ 19.9
SRSF1Q07955 IDI1-202ENST00000427898 441 ntTSL 27.38□□□□□ -1.231e-11■■■■□ 19.9
SRSF1Q07955 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC6.66□□□□□ -1.347e-8■■■■□ 19.9
SRSF1Q07955 CALD1-209ENST00000436461 1614 ntTSL 514.81□□□□□ -0.046e-8■■■■□ 19.9
SRSF1Q07955 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.16□□□□□ -0.146e-8■■■■□ 19.9
SRSF1Q07955 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.55□□□□□ -0.46e-8■■■■□ 19.9
SRSF1Q07955 CALD1-207ENST00000430085 1938 ntTSL 211.86□□□□□ -0.516e-8■■■■□ 19.9
SRSF1Q07955 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.59□□□□□ -0.556e-8■■■■□ 19.9
SRSF1Q07955 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.47□□□□□ -0.736e-8■■■■□ 19.9
SRSF1Q07955 CALD1-210ENST00000443197 4173 ntTSL 58.12□□□□□ -1.116e-8■■■■□ 19.9
SRSF1Q07955 CALD1-203ENST00000393118 4281 ntTSL 1 (best) BASIC8.12□□□□□ -1.116e-8■■■■□ 19.9
SRSF1Q07955 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.146e-8■■■■□ 19.9
SRSF1Q07955 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC7.1□□□□□ -1.276e-8■■■■□ 19.9
SRSF1Q07955 CALD1-220ENST00000482470 3941 ntTSL 27.06□□□□□ -1.286e-8■■■■□ 19.9
SRSF1Q07955 GSE1-209ENST00000479488 649 ntTSL 213.97□□□□□ -0.178e-6■■■■□ 19.8
SRSF1Q07955 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.53□□□□□ -0.568e-6■■■■□ 19.8
SRSF1Q07955 DDX46-211ENST00000513987 543 ntTSL 37.11□□□□□ -1.278e-6■■■■□ 19.8
SRSF1Q07955 DDX46-204ENST00000505592 555 ntTSL 24.51□□□□□ -1.698e-6■■■■□ 19.8
SRSF1Q07955 OAZ1-208ENST00000592727 726 ntTSL 214.27□□□□□ -0.136e-15■■■■□ 19.8
SRSF1Q07955 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC8.57□□□□□ -1.042e-6■■■■□ 19.8
SRSF1Q07955 SREK1-207ENST00000520058 559 ntTSL 216.87■□□□□ 0.298e-9■■■■□ 19.8
SRSF1Q07955 SREK1-214ENST00000523851 458 ntTSL 315.9■□□□□ 0.148e-9■■■■□ 19.8
SRSF1Q07955 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.96□□□□□ -0.018e-9■■■■□ 19.8
SRSF1Q07955 SREK1-215ENST00000524111 4074 ntTSL 56.61□□□□□ -1.358e-9■■■■□ 19.8
SRSF1Q07955 SREK1-210ENST00000521691 580 ntTSL 33.44□□□□□ -1.868e-9■■■■□ 19.8
SRSF1Q07955 NADK-206ENST00000464373 722 ntTSL 226.22■■□□□ 1.792e-6■■■■□ 19.8
SRSF1Q07955 NADK-205ENST00000460602 974 ntTSL 224.36■■□□□ 1.492e-6■■■■□ 19.8
SRSF1Q07955 NADK-212ENST00000492768 859 ntTSL 323.13■■□□□ 1.292e-6■■■■□ 19.8
SRSF1Q07955 NADK-213ENST00000492845 937 ntTSL 218.33■□□□□ 0.522e-6■■■■□ 19.8
SRSF1Q07955 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.152e-6■■■■□ 19.8
SRSF1Q07955 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.742e-6■■■■□ 19.8
SRSF1Q07955 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.982e-6■■■■□ 19.8
SRSF1Q07955 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.622e-6■■■■□ 19.8
SRSF1Q07955 TTC37-212ENST00000513823 577 ntTSL 44.48□□□□□ -1.692e-6■■■■□ 19.8
SRSF1Q07955 TTC37-213ENST00000514952 2102 ntTSL 1 (best)3.02□□□□□ -1.932e-6■■■■□ 19.8
SRSF1Q07955 RPUSD1-209ENST00000567283 835 ntTSL 323.96■■□□□ 1.432e-6■■■■□ 19.8
SRSF1Q07955 RPUSD1-210ENST00000569601 917 ntTSL 322.51■■□□□ 1.192e-6■■■■□ 19.8
SRSF1Q07955 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.03■■□□□ 1.122e-6■■■■□ 19.8
SRSF1Q07955 RPUSD1-206ENST00000565503 561 ntTSL 321.5■■□□□ 1.032e-6■■■■□ 19.8
SRSF1Q07955 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.39■□□□□ 0.692e-6■■■■□ 19.8
SRSF1Q07955 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.652e-6■■■■□ 19.8
SRSF1Q07955 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.632e-6■■■■□ 19.8
SRSF1Q07955 GNB1L-206ENST00000481086 854 ntTSL 318.74■□□□□ 0.593e-7■■■■□ 19.8
SRSF1Q07955 GNB1L-204ENST00000453108 702 ntTSL 318.74■□□□□ 0.593e-7■■■■□ 19.8
SRSF1Q07955 RTL10-204ENST00000416337 730 ntAPPRIS ALT2 TSL 218.74■□□□□ 0.591e-15■■■■□ 19.8
SRSF1Q07955 KANSL3-202ENST00000416138 552 ntTSL 418.06■□□□□ 0.481e-8■■■■□ 19.8
SRSF1Q07955 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.463e-7■■■■□ 19.8
SRSF1Q07955 RPUSD1-205ENST00000565377 940 ntTSL 217.9■□□□□ 0.462e-6■■■■□ 19.8
SRSF1Q07955 GNB1L-205ENST00000460402 1197 ntTSL 317.16■□□□□ 0.343e-7■■■■□ 19.8
SRSF1Q07955 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.334e-6■■■■□ 19.8
SRSF1Q07955 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.99■□□□□ 0.313e-7■■■■□ 19.8
SRSF1Q07955 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.262e-6■■■■□ 19.8
SRSF1Q07955 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.38■□□□□ 0.212e-6■■■■□ 19.8
SRSF1Q07955 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.22e-6■■■■□ 19.8
SRSF1Q07955 KANSL3-211ENST00000452268 1448 ntTSL 516.03■□□□□ 0.161e-8■■■■□ 19.8
SRSF1Q07955 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.52■□□□□ 0.082e-6■■■■□ 19.8
SRSF1Q07955 HKR1-211ENST00000589188 527 ntTSL 415.39■□□□□ 0.052e-6■■■■□ 19.8
SRSF1Q07955 HKR1-209ENST00000587829 571 ntTSL 515.39■□□□□ 0.052e-6■■■■□ 19.8
SRSF1Q07955 HKR1-224ENST00000591485 664 ntTSL 414.91□□□□□ -0.022e-6■■■■□ 19.8
SRSF1Q07955 ERCC2-202ENST00000391942 1488 ntTSL 214.88□□□□□ -0.032e-6■■■■□ 19.8
SRSF1Q07955 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.87□□□□□ -0.032e-6■■■■□ 19.8
SRSF1Q07955 ZNF23-210ENST00000567340 558 ntTSL 414.59□□□□□ -0.072e-6■■■■□ 19.8
SRSF1Q07955 NCK2-202ENST00000393348 790 ntTSL 314.23□□□□□ -0.132e-6■■■■□ 19.8
SRSF1Q07955 KANSL3-210ENST00000451819 693 ntTSL 514.14□□□□□ -0.151e-8■■■■□ 19.8
SRSF1Q07955 UBXN11-211ENST00000450041 649 ntTSL 514.12□□□□□ -0.152e-6■■■■□ 19.8
SRSF1Q07955 RPUSD1-204ENST00000563560 587 ntTSL 213.94□□□□□ -0.182e-6■■■■□ 19.8
SRSF1Q07955 HKR1-212ENST00000589218 958 ntTSL 313.83□□□□□ -0.22e-6■■■■□ 19.8
SRSF1Q07955 NCK2-204ENST00000425756 494 ntTSL 313.79□□□□□ -0.22e-6■■■■□ 19.8
SRSF1Q07955 ERCC2-201ENST00000391941 2871 ntTSL 1 (best)13.7□□□□□ -0.222e-6■■■■□ 19.8
SRSF1Q07955 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.63□□□□□ -0.232e-6■■■■□ 19.8
SRSF1Q07955 ERCC2-211ENST00000588652 2405 ntTSL 213.44□□□□□ -0.262e-6■■■■□ 19.8
SRSF1Q07955 MEGF6-205ENST00000485002 4705 ntTSL 512.83□□□□□ -0.364e-6■■■■□ 19.8
SRSF1Q07955 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.362e-6■■■■□ 19.8
SRSF1Q07955 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■■■■□ 19.8
SRSF1Q07955 UBXN11-209ENST00000423664 793 ntTSL 312.61□□□□□ -0.392e-6■■■■□ 19.8
SRSF1Q07955 UBXN11-210ENST00000442942 688 ntTSL 212.61□□□□□ -0.392e-6■■■■□ 19.8
SRSF1Q07955 UBXN11-212ENST00000452980 782 ntTSL 312.59□□□□□ -0.392e-6■■■■□ 19.8
SRSF1Q07955 HKR1-226ENST00000592362 575 ntTSL 512.51□□□□□ -0.412e-6■■■■□ 19.8
SRSF1Q07955 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.422e-6■■■■□ 19.8
SRSF1Q07955 RTL10-205ENST00000484072 1385 ntTSL 212.41□□□□□ -0.421e-15■■■■□ 19.8
SRSF1Q07955 TKFC-218ENST00000533853 460 ntTSL 312.37□□□□□ -0.432e-6■■■■□ 19.8
SRSF1Q07955 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.472e-6■■■■□ 19.8
SRSF1Q07955 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.472e-6■■■■□ 19.8
SRSF1Q07955 ZNF23-209ENST00000565718 555 ntTSL 511.92□□□□□ -0.52e-6■■■■□ 19.8
SRSF1Q07955 GBA2-204ENST00000467252 1913 ntTSL 1 (best)11.57□□□□□ -0.562e-6■■■■□ 19.8
SRSF1Q07955 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.573e-7■■■■□ 19.8
SRSF1Q07955 KANSL3-207ENST00000444759 2717 ntTSL 211.36□□□□□ -0.591e-8■■■■□ 19.8
SRSF1Q07955 KANSL3-205ENST00000425656 1526 ntTSL 511.08□□□□□ -0.641e-8■■■■□ 19.8
Retrieved 100 of 14,836 protein–RNA pairs in 237.4 ms