RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 NISCHQ9Y2I1 1504 aa47.84■■■■■ 5.25
RPUSD1-205ENST00000565377 CCDC180Q9P1Z9 1646 aa42.39■■■■■ 4.38
RPUSD1-205ENST00000565377 ABCC9O60706 1549 aa41■■■■■ 4.15
RPUSD1-205ENST00000565377 ZCCHC6Q5VYS8 1495 aaKnown RBP39.93■■■■□ 3.98
RPUSD1-205ENST00000565377 DCAF8L2P0C7V8 631 aa39.83■■■■□ 3.97
RPUSD1-205ENST00000565377 NACADO15069 1562 aa39.8■■■■□ 3.96
RPUSD1-205ENST00000565377 MYO15BQ96JP2 1530 aa39.75■■■■□ 3.95
RPUSD1-205ENST00000565377 RB1CC1Q8TDY2 1594 aa39.74■■■■□ 3.95
RPUSD1-205ENST00000565377 DCAF1Q9Y4B6 1507 aa39.69■■■■□ 3.94
RPUSD1-205ENST00000565377 UNC13AQ9UPW8 1703 aa38.63■■■■□ 3.77
RPUSD1-205ENST00000565377 SCRIBQ14160 1630 aa38.6■■■■□ 3.77
RPUSD1-205ENST00000565377 PABPN1Q86U42 306 aaKnown RBP eCLIP38.38■■■■□ 3.73
RPUSD1-205ENST00000565377 BICRAQ9NZM4 1560 aa38.36■■■■□ 3.73
RPUSD1-205ENST00000565377 SHROOM4Q9ULL8 1493 aa38.26■■■■□ 3.72
RPUSD1-205ENST00000565377 EIF4G1Q04637 1599 aaKnown RBP37.39■■■■□ 3.58
RPUSD1-205ENST00000565377 DNAJC5BQ9UF47 199 aa37.18■■■■□ 3.54
RPUSD1-205ENST00000565377 CC2D2AQ9P2K1 1620 aa37.12■■■■□ 3.53
RPUSD1-205ENST00000565377 CECR2Q9BXF3 1484 aa37.12■■■■□ 3.53
RPUSD1-205ENST00000565377 BAZ1AQ9NRL2 1556 aaPredicted RBP37.11■■■■□ 3.53
RPUSD1-205ENST00000565377 SMARCA4P51532 1647 aa37.01■■■■□ 3.52
RPUSD1-205ENST00000565377 MROH2BQ7Z745 1585 aa36.79■■■■□ 3.48
RPUSD1-205ENST00000565377 SMARCA2P51531 1590 aa36.78■■■■□ 3.48
RPUSD1-205ENST00000565377 ATAD2BQ9ULI0 1458 aa36.74■■■■□ 3.47
RPUSD1-205ENST00000565377 NCAPD3P42695 1498 aa36.7■■■■□ 3.47
RPUSD1-205ENST00000565377 PEG3Q9GZU2 1588 aa36.7■■■■□ 3.46
RPUSD1-205ENST00000565377 RSF1Q96T23 1441 aaPredicted RBP36.58■■■■□ 3.45
RPUSD1-205ENST00000565377 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
RPUSD1-205ENST00000565377 BAZ1BQ9UIG0 1483 aaKnown RBP36.5■■■■□ 3.43
RPUSD1-205ENST00000565377 WIZO95785 1651 aa36.4■■■■□ 3.42
RPUSD1-205ENST00000565377 TOP2AP11388 1531 aaKnown RBP36.14■■■■□ 3.38
RPUSD1-205ENST00000565377 SUPT5HO00267 1087 aaKnown RBP35.95■■■■□ 3.35
RPUSD1-205ENST00000565377 LAMC3Q9Y6N6 1575 aa35.68■■■■□ 3.3
RPUSD1-205ENST00000565377 CCDC88BA6NC98 1476 aa35.68■■■■□ 3.3
RPUSD1-205ENST00000565377 CADPSQ9ULU8 1353 aa35.66■■■■□ 3.3
RPUSD1-205ENST00000565377 NESP48681 1621 aa35.54■■■■□ 3.28
RPUSD1-205ENST00000565377 CFTRP13569 1480 aa35.51■■■■□ 3.28
RPUSD1-205ENST00000565377 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
RPUSD1-205ENST00000565377 ERCC6Q03468 1493 aa35.42■■■■□ 3.26
RPUSD1-205ENST00000565377 PRDM2Q13029 1718 aa35.22■■■■□ 3.23
RPUSD1-205ENST00000565377 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
RPUSD1-205ENST00000565377 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
RPUSD1-205ENST00000565377 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
RPUSD1-205ENST00000565377 MRC2Q9UBG0 1479 aa35.02■■■■□ 3.2
RPUSD1-205ENST00000565377 THOC2Q8NI27 1593 aaKnown RBP34.96■■■■□ 3.19
RPUSD1-205ENST00000565377 CUX2O14529 1486 aa34.93■■■■□ 3.18
RPUSD1-205ENST00000565377 WDR62O43379 1518 aa34.86■■■■□ 3.17
RPUSD1-205ENST00000565377 ABCC8Q09428 1581 aa34.85■■■■□ 3.17
RPUSD1-205ENST00000565377 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.16
RPUSD1-205ENST00000565377 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.14
RPUSD1-205ENST00000565377 TOPBP1Q92547 1522 aa34.67■■■■□ 3.14
RPUSD1-205ENST00000565377 WRNQ14191 1432 aaPredicted RBP eCLIP34.54■■■■□ 3.12
RPUSD1-205ENST00000565377 CUX1P39880 1505 aa34.51■■■■□ 3.12
RPUSD1-205ENST00000565377 IFT140Q96RY7 1462 aa34.44■■■■□ 3.1
RPUSD1-205ENST00000565377 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
RPUSD1-205ENST00000565377 TOP2BQ02880 1626 aa34.38■■■■□ 3.09
RPUSD1-205ENST00000565377 FGD5Q6ZNL6 1462 aa34.37■■■■□ 3.09
RPUSD1-205ENST00000565377 BIVM-ERCC5R4GMW8 1640 aa34.35■■■■□ 3.09
RPUSD1-205ENST00000565377 SOGA1O94964 1423 aa34.33■■■■□ 3.09
RPUSD1-205ENST00000565377 SYNJ1O43426 1573 aa34.31■■■■□ 3.08
RPUSD1-205ENST00000565377 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
RPUSD1-205ENST00000565377 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.06
RPUSD1-205ENST00000565377 WDR97A6NE52 1622 aa34.15■■■■□ 3.06
RPUSD1-205ENST00000565377 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
RPUSD1-205ENST00000565377 ZNF608Q9ULD9 1512 aaPredicted RBP34.09■■■■□ 3.05
RPUSD1-205ENST00000565377 TRIM41Q8WV44 630 aa34.04■■■■□ 3.04
RPUSD1-205ENST00000565377 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
RPUSD1-205ENST00000565377 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
RPUSD1-205ENST00000565377 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.038e-8■■■■■ 39.5
RPUSD1-205ENST00000565377 GAPVD1Q14C86 1478 aa33.93■■■■□ 3.02
RPUSD1-205ENST00000565377 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
RPUSD1-205ENST00000565377 ABCA5Q8WWZ7 1642 aa33.88■■■■□ 3.01
RPUSD1-205ENST00000565377 KIF27Q86VH2 1401 aa33.84■■■■□ 3.01
RPUSD1-205ENST00000565377 CHIC1Q5VXU3 224 aa33.79■■■■□ 3
RPUSD1-205ENST00000565377 MAGI1Q96QZ7 1491 aaPredicted RBP33.78■■■■□ 3
RPUSD1-205ENST00000565377 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
RPUSD1-205ENST00000565377 ERICH3Q5RHP9 1530 aa33.74■■■□□ 2.99
RPUSD1-205ENST00000565377 SNAPC4Q5SXM2 1469 aa33.72■■■□□ 2.99
RPUSD1-205ENST00000565377 CHMP7Q8WUX9 453 aaPredicted RBP33.62■■■□□ 2.97
RPUSD1-205ENST00000565377 SYNJ2O15056 1496 aa33.62■■■□□ 2.97
RPUSD1-205ENST00000565377 FBLN2P98095 1184 aa33.59■■■□□ 2.97
RPUSD1-205ENST00000565377 OSCARQ8IYS5 282 aa33.58■■■□□ 2.97
RPUSD1-205ENST00000565377 FHAD1B1AJZ9 1412 aa33.58■■■□□ 2.97
RPUSD1-205ENST00000565377 IGF1RP08069 1367 aa33.57■■■□□ 2.96
RPUSD1-205ENST00000565377 ADAMTS12P58397 1594 aa33.53■■■□□ 2.96
RPUSD1-205ENST00000565377 EEA1Q15075 1411 aa33.52■■■□□ 2.96
RPUSD1-205ENST00000565377 CUL7Q14999 1698 aa33.51■■■□□ 2.95
RPUSD1-205ENST00000565377 CHD1O14646 1710 aa33.47■■■□□ 2.95
RPUSD1-205ENST00000565377 RUSC2Q8N2Y8 1516 aa33.43■■■□□ 2.94
RPUSD1-205ENST00000565377 CARMIL1Q5VZK9 1371 aa33.42■■■□□ 2.94
RPUSD1-205ENST00000565377 GRIN2AQ12879 1464 aa33.42■■■□□ 2.94
RPUSD1-205ENST00000565377 DNAJC5Q9H3Z4 198 aa33.34■■■□□ 2.93
RPUSD1-205ENST00000565377 CSRNP3Q8WYN3 585 aa33.33■■■□□ 2.93
RPUSD1-205ENST00000565377 RAPGEF2Q9Y4G8 1499 aa33.27■■■□□ 2.92
RPUSD1-205ENST00000565377 NUP160Q12769 1436 aa33.25■■■□□ 2.91
RPUSD1-205ENST00000565377 PRXQ9BXM0 1461 aa33.21■■■□□ 2.91
RPUSD1-205ENST00000565377 FAM9AQ8IZU1 332 aaPredicted RBP33.19■■■□□ 2.9
RPUSD1-205ENST00000565377 CLASP1Q7Z460 1538 aa33.18■■■□□ 2.9
RPUSD1-205ENST00000565377 CEP170Q5SW79 1584 aa33.16■■■□□ 2.9
RPUSD1-205ENST00000565377 KIAA0586Q9BVV6 1533 aa33.07■■■□□ 2.89
RPUSD1-205ENST00000565377 KIF21BO75037 1637 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms