RNA–Protein interactions for RNA: ENST00000479488.1

GSE1-209, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-209ENST00000479488 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
GSE1-209ENST00000479488 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
GSE1-209ENST00000479488 ABCC9O60706 1549 aa32.12■■■□□ 2.73
GSE1-209ENST00000479488 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
GSE1-209ENST00000479488 RB1CC1Q8TDY2 1594 aa30.96■■■□□ 2.55
GSE1-209ENST00000479488 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
GSE1-209ENST00000479488 NACADO15069 1562 aa30.92■■■□□ 2.54
GSE1-209ENST00000479488 MYO15BQ96JP2 1530 aa30.69■■■□□ 2.5
GSE1-209ENST00000479488 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
GSE1-209ENST00000479488 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
GSE1-209ENST00000479488 SCRIBQ14160 1630 aa30.14■■■□□ 2.42
GSE1-209ENST00000479488 PABPN1Q86U42 306 aaKnown RBP eCLIP30.01■■■□□ 2.39
GSE1-209ENST00000479488 BICRAQ9NZM4 1560 aa29.92■■■□□ 2.38
GSE1-209ENST00000479488 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
GSE1-209ENST00000479488 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
GSE1-209ENST00000479488 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
GSE1-209ENST00000479488 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
GSE1-209ENST00000479488 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
GSE1-209ENST00000479488 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
GSE1-209ENST00000479488 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
GSE1-209ENST00000479488 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
GSE1-209ENST00000479488 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
GSE1-209ENST00000479488 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
GSE1-209ENST00000479488 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
GSE1-209ENST00000479488 PEG3Q9GZU2 1588 aa28.42■■■□□ 2.14
GSE1-209ENST00000479488 HMGXB3Q12766 1538 aa28.4■■■□□ 2.14
GSE1-209ENST00000479488 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
GSE1-209ENST00000479488 WIZO95785 1651 aa28.33■■■□□ 2.13
GSE1-209ENST00000479488 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
GSE1-209ENST00000479488 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
GSE1-209ENST00000479488 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
GSE1-209ENST00000479488 NESP48681 1621 aa27.81■■■□□ 2.04
GSE1-209ENST00000479488 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
GSE1-209ENST00000479488 ERCC6Q03468 1493 aa27.74■■■□□ 2.03
GSE1-209ENST00000479488 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
GSE1-209ENST00000479488 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
GSE1-209ENST00000479488 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2
GSE1-209ENST00000479488 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
GSE1-209ENST00000479488 CFTRP13569 1480 aa27.53■■■□□ 2
GSE1-209ENST00000479488 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
GSE1-209ENST00000479488 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
GSE1-209ENST00000479488 CEP164Q9UPV0 1460 aa27.4■■□□□ 1.98
GSE1-209ENST00000479488 THOC2Q8NI27 1593 aaKnown RBP27.36■■□□□ 1.97
GSE1-209ENST00000479488 MRC2Q9UBG0 1479 aa27.3■■□□□ 1.96
GSE1-209ENST00000479488 CUX2O14529 1486 aa27.29■■□□□ 1.96
GSE1-209ENST00000479488 WDR62O43379 1518 aa27.17■■□□□ 1.94
GSE1-209ENST00000479488 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
GSE1-209ENST00000479488 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
GSE1-209ENST00000479488 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
GSE1-209ENST00000479488 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
GSE1-209ENST00000479488 CUX1P39880 1505 aa26.82■■□□□ 1.88
GSE1-209ENST00000479488 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
GSE1-209ENST00000479488 POLA1P09884 1462 aaPredicted RBP26.75■■□□□ 1.87
GSE1-209ENST00000479488 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
GSE1-209ENST00000479488 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
GSE1-209ENST00000479488 SYNJ1O43426 1573 aa26.66■■□□□ 1.86
GSE1-209ENST00000479488 SOGA1O94964 1423 aa26.65■■□□□ 1.86
GSE1-209ENST00000479488 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
GSE1-209ENST00000479488 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
GSE1-209ENST00000479488 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
GSE1-209ENST00000479488 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.86
GSE1-209ENST00000479488 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
GSE1-209ENST00000479488 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
GSE1-209ENST00000479488 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
GSE1-209ENST00000479488 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.839e-7■■■□□ 18.9
GSE1-209ENST00000479488 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
GSE1-209ENST00000479488 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
GSE1-209ENST00000479488 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
GSE1-209ENST00000479488 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
GSE1-209ENST00000479488 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
GSE1-209ENST00000479488 GRIN2BQ13224 1484 aa26.34■■□□□ 1.81
GSE1-209ENST00000479488 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
GSE1-209ENST00000479488 FBLN2P98095 1184 aa26.26■■□□□ 1.79
GSE1-209ENST00000479488 CHD1O14646 1710 aa26.25■■□□□ 1.79
GSE1-209ENST00000479488 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
GSE1-209ENST00000479488 TRIM41Q8WV44 630 aa26.23■■□□□ 1.79
GSE1-209ENST00000479488 DNAJC5Q9H3Z4 198 aa26.19■■□□□ 1.78
GSE1-209ENST00000479488 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
GSE1-209ENST00000479488 OSCARQ8IYS5 282 aa26.17■■□□□ 1.78
GSE1-209ENST00000479488 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
GSE1-209ENST00000479488 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.78
GSE1-209ENST00000479488 SYNJ2O15056 1496 aa26.14■■□□□ 1.78
GSE1-209ENST00000479488 ADAMTS12P58397 1594 aa26.13■■□□□ 1.77
GSE1-209ENST00000479488 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
GSE1-209ENST00000479488 CUL7Q14999 1698 aa26■■□□□ 1.75
GSE1-209ENST00000479488 GRIN2AQ12879 1464 aa26■■□□□ 1.75
GSE1-209ENST00000479488 IGF1RP08069 1367 aa25.95■■□□□ 1.74
GSE1-209ENST00000479488 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
GSE1-209ENST00000479488 RUSC2Q8N2Y8 1516 aa25.93■■□□□ 1.74
GSE1-209ENST00000479488 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
GSE1-209ENST00000479488 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
GSE1-209ENST00000479488 CARMIL1Q5VZK9 1371 aa25.86■■□□□ 1.73
GSE1-209ENST00000479488 NUP160Q12769 1436 aa25.82■■□□□ 1.72
GSE1-209ENST00000479488 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
GSE1-209ENST00000479488 RIMBP3CA6NJZ7 1639 aa25.79■■□□□ 1.72
GSE1-209ENST00000479488 RIMBP3BA6NNM3 1639 aa25.79■■□□□ 1.72
GSE1-209ENST00000479488 RIMBP3Q9UFD9 1639 aa25.79■■□□□ 1.72
GSE1-209ENST00000479488 EEA1Q15075 1411 aa25.76■■□□□ 1.71
GSE1-209ENST00000479488 RAPGEF2Q9Y4G8 1499 aa25.75■■□□□ 1.71
GSE1-209ENST00000479488 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms