RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 NISCHQ9Y2I1 1504 aa54.16■■■■■ 6.26
RPUSD1-206ENST00000565503 ABCC9O60706 1549 aa49.03■■■■■ 5.44
RPUSD1-206ENST00000565503 CCDC180Q9P1Z9 1646 aa48.85■■■■■ 5.41
RPUSD1-206ENST00000565503 RB1CC1Q8TDY2 1594 aa46.62■■■■■ 5.05
RPUSD1-206ENST00000565503 DNAJC5BQ9UF47 199 aa46.26■■■■■ 5
RPUSD1-206ENST00000565503 NACADO15069 1562 aa46.22■■■■■ 4.99
RPUSD1-206ENST00000565503 DCAF8L2P0C7V8 631 aa45.71■■■■■ 4.91
RPUSD1-206ENST00000565503 UNC13AQ9UPW8 1703 aa45.6■■■■■ 4.89
RPUSD1-206ENST00000565503 PABPN1Q86U42 306 aaKnown RBP eCLIP45.53■■■■■ 4.88
RPUSD1-206ENST00000565503 MYO15BQ96JP2 1530 aa45.52■■■■■ 4.88
RPUSD1-206ENST00000565503 BICRAQ9NZM4 1560 aa45.24■■■■■ 4.83
RPUSD1-206ENST00000565503 ZCCHC6Q5VYS8 1495 aaKnown RBP44.82■■■■■ 4.77
RPUSD1-206ENST00000565503 DCAF1Q9Y4B6 1507 aa44.79■■■■■ 4.76
RPUSD1-206ENST00000565503 SHROOM4Q9ULL8 1493 aa44.7■■■■■ 4.75
RPUSD1-206ENST00000565503 SCRIBQ14160 1630 aa44.37■■■■■ 4.69
RPUSD1-206ENST00000565503 CC2D2AQ9P2K1 1620 aa44.34■■■■■ 4.69
RPUSD1-206ENST00000565503 CECR2Q9BXF3 1484 aa44.24■■■■■ 4.67
RPUSD1-206ENST00000565503 EIF4G1Q04637 1599 aaKnown RBP44.17■■■■■ 4.66
RPUSD1-206ENST00000565503 DNAJC5Q9H3Z4 198 aa42.8■■■■■ 4.44
RPUSD1-206ENST00000565503 NCAPD3P42695 1498 aa42.64■■■■■ 4.42
RPUSD1-206ENST00000565503 CUX2O14529 1486 aa42.5■■■■■ 4.39
RPUSD1-206ENST00000565503 ATAD2BQ9ULI0 1458 aa42.44■■■■■ 4.38
RPUSD1-206ENST00000565503 ERCC6Q03468 1493 aa42.39■■■■■ 4.38
RPUSD1-206ENST00000565503 SMARCA2P51531 1590 aa42.36■■■■■ 4.37
RPUSD1-206ENST00000565503 SMARCA4P51532 1647 aa42.35■■■■■ 4.37
RPUSD1-206ENST00000565503 HMGXB3Q12766 1538 aa42.34■■■■■ 4.37
RPUSD1-206ENST00000565503 BAZ1AQ9NRL2 1556 aaPredicted RBP42.09■■■■■ 4.33
RPUSD1-206ENST00000565503 BAZ1BQ9UIG0 1483 aaKnown RBP42.02■■■■■ 4.32
RPUSD1-206ENST00000565503 NESP48681 1621 aa42.02■■■■■ 4.32
RPUSD1-206ENST00000565503 PEG3Q9GZU2 1588 aa41.98■■■■■ 4.31
RPUSD1-206ENST00000565503 LAMC3Q9Y6N6 1575 aa41.77■■■■■ 4.28
RPUSD1-206ENST00000565503 THOC2Q8NI27 1593 aaKnown RBP41.76■■■■■ 4.27
RPUSD1-206ENST00000565503 MROH2BQ7Z745 1585 aa41.69■■■■■ 4.26
RPUSD1-206ENST00000565503 KIF21AQ7Z4S6 1674 aa41.55■■■■■ 4.24
RPUSD1-206ENST00000565503 PDS5BQ9NTI5 1447 aa41.51■■■■■ 4.24
RPUSD1-206ENST00000565503 CADPSQ9ULU8 1353 aa41.3■■■■■ 4.2
RPUSD1-206ENST00000565503 WIZO95785 1651 aa41.19■■■■■ 4.18
RPUSD1-206ENST00000565503 MRC2Q9UBG0 1479 aa41.16■■■■■ 4.18
RPUSD1-206ENST00000565503 WDR62O43379 1518 aa41.1■■■■■ 4.17
RPUSD1-206ENST00000565503 CEP164Q9UPV0 1460 aa40.93■■■■■ 4.14
RPUSD1-206ENST00000565503 FANCD2Q9BXW9 1451 aa40.84■■■■■ 4.13
RPUSD1-206ENST00000565503 CFTRP13569 1480 aa40.78■■■■■ 4.12
RPUSD1-206ENST00000565503 TRIM41Q8WV44 630 aa40.7■■■■■ 4.11
RPUSD1-206ENST00000565503 RSF1Q96T23 1441 aaPredicted RBP40.69■■■■■ 4.1
RPUSD1-206ENST00000565503 TOP2AP11388 1531 aaKnown RBP40.68■■■■■ 4.1
RPUSD1-206ENST00000565503 URB2Q14146 1524 aaKnown RBP40.52■■■■■ 4.08
RPUSD1-206ENST00000565503 PRDM2Q13029 1718 aa40.47■■■■■ 4.07
RPUSD1-206ENST00000565503 OSCARQ8IYS5 282 aa40.43■■■■■ 4.06
RPUSD1-206ENST00000565503 CCDC88BA6NC98 1476 aa40.18■■■■■ 4.02
RPUSD1-206ENST00000565503 IFT140Q96RY7 1462 aa40.14■■■■■ 4.02
RPUSD1-206ENST00000565503 ZNF608Q9ULD9 1512 aaPredicted RBP40.05■■■■■ 4
RPUSD1-206ENST00000565503 TOPBP1Q92547 1522 aa40.04■■■■■ 4
RPUSD1-206ENST00000565503 RIMBP3CA6NJZ7 1639 aa39.99■■■■□ 3.99
RPUSD1-206ENST00000565503 RIMBP3BA6NNM3 1639 aa39.99■■■■□ 3.99
RPUSD1-206ENST00000565503 RIMBP3Q9UFD9 1639 aa39.99■■■■□ 3.99
RPUSD1-206ENST00000565503 ABCC8Q09428 1581 aa39.98■■■■□ 3.99
RPUSD1-206ENST00000565503 DNMBPQ6XZF7 1577 aa39.89■■■■□ 3.98
RPUSD1-206ENST00000565503 EIF4G3O43432 1585 aaKnown RBP39.88■■■■□ 3.97
RPUSD1-206ENST00000565503 ARHGEF11O15085 1522 aa39.81■■■■□ 3.96
RPUSD1-206ENST00000565503 TARBP1Q13395 1621 aaKnown RBP39.74■■■■□ 3.95
RPUSD1-206ENST00000565503 CHD1O14646 1710 aa39.67■■■■□ 3.94
RPUSD1-206ENST00000565503 AQRO60306 1485 aaKnown RBP eCLIP39.63■■■■□ 3.948e-8■■■■■ 39.5
RPUSD1-206ENST00000565503 POLA1P09884 1462 aaPredicted RBP39.6■■■■□ 3.93
RPUSD1-206ENST00000565503 CYB5RLQ6IPT4 315 aa39.46■■■■□ 3.91
RPUSD1-206ENST00000565503 RAD54L2Q9Y4B4 1467 aa39.41■■■■□ 3.9
RPUSD1-206ENST00000565503 FBLN2P98095 1184 aa39.4■■■■□ 3.9
RPUSD1-206ENST00000565503 WDR97A6NE52 1622 aa39.39■■■■□ 3.9
RPUSD1-206ENST00000565503 SOGA1O94964 1423 aa39.39■■■■□ 3.9
RPUSD1-206ENST00000565503 ARAP1Q96P48 1450 aa39.37■■■■□ 3.89
RPUSD1-206ENST00000565503 TDRD9Q8NDG6 1382 aaKnown RBP39.32■■■■□ 3.88
RPUSD1-206ENST00000565503 FGD5Q6ZNL6 1462 aa39.29■■■■□ 3.88
RPUSD1-206ENST00000565503 SNAPC4Q5SXM2 1469 aa39.24■■■■□ 3.87
RPUSD1-206ENST00000565503 CUX1P39880 1505 aa39.2■■■■□ 3.87
RPUSD1-206ENST00000565503 CLASP1Q7Z460 1538 aa39.19■■■■□ 3.86
RPUSD1-206ENST00000565503 MAGI1Q96QZ7 1491 aaPredicted RBP39.18■■■■□ 3.86
RPUSD1-206ENST00000565503 SYNJ1O43426 1573 aa39.15■■■■□ 3.86
RPUSD1-206ENST00000565503 TRHP20396 242 aaPredicted RBP39.13■■■■□ 3.85
RPUSD1-206ENST00000565503 GRIN2BQ13224 1484 aa39.12■■■■□ 3.85
RPUSD1-206ENST00000565503 CHMP7Q8WUX9 453 aaPredicted RBP39.1■■■■□ 3.85
RPUSD1-206ENST00000565503 SYNJ2O15056 1496 aa39.04■■■■□ 3.84
RPUSD1-206ENST00000565503 PBRM1Q86U86 1689 aa39■■■■□ 3.83
RPUSD1-206ENST00000565503 GAPVD1Q14C86 1478 aa38.92■■■■□ 3.82
RPUSD1-206ENST00000565503 ABCA10Q8WWZ4 1543 aa38.86■■■■□ 3.81
RPUSD1-206ENST00000565503 ABCA5Q8WWZ7 1642 aa38.85■■■■□ 3.81
RPUSD1-206ENST00000565503 GRIN2AQ12879 1464 aa38.62■■■■□ 3.77
RPUSD1-206ENST00000565503 WRNQ14191 1432 aaPredicted RBP eCLIP38.62■■■■□ 3.77
RPUSD1-206ENST00000565503 ADAMTS12P58397 1594 aa38.57■■■■□ 3.77
RPUSD1-206ENST00000565503 BIVM-ERCC5R4GMW8 1640 aa38.56■■■■□ 3.76
RPUSD1-206ENST00000565503 SUPT5HO00267 1087 aaKnown RBP38.53■■■■□ 3.76
RPUSD1-206ENST00000565503 TOP2BQ02880 1626 aa38.52■■■■□ 3.76
RPUSD1-206ENST00000565503 NUP160Q12769 1436 aa38.51■■■■□ 3.76
RPUSD1-206ENST00000565503 CEP170Q5SW79 1584 aa38.49■■■■□ 3.75
RPUSD1-206ENST00000565503 ERCC6L2Q5T890 1561 aa38.48■■■■□ 3.75
RPUSD1-206ENST00000565503 FHAD1B1AJZ9 1412 aa38.43■■■■□ 3.74
RPUSD1-206ENST00000565503 SHROOM2Q13796 1616 aa38.42■■■■□ 3.74
RPUSD1-206ENST00000565503 ERICH3Q5RHP9 1530 aa38.38■■■■□ 3.74
RPUSD1-206ENST00000565503 AEBP2Q6ZN18 517 aaPredicted RBP38.27■■■■□ 3.72
RPUSD1-206ENST00000565503 PRG4Q92954 1404 aaPredicted RBP38.13■■■■□ 3.7
RPUSD1-206ENST00000565503 KIF13AQ9H1H9 1805 aa38.11■■■■□ 3.69
RPUSD1-206ENST00000565503 JPH4Q96JJ6 628 aa38.06■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms