RNA–Protein interactions for RNA: ENST00000513987.1

DDX46-211, Transcript of DEAD-box helicase 46, humanhuman

TSL 3

Gene DDX46, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-211ENST00000513987 AEBP2Q6ZN18 517 aaPredicted RBP27■■□□□ 1.91
DDX46-211ENST00000513987 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
DDX46-211ENST00000513987 PHF23Q9BUL5 403 aaPredicted RBP23.73■■□□□ 1.39
DDX46-211ENST00000513987 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
DDX46-211ENST00000513987 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
DDX46-211ENST00000513987 FOXD1Q16676 465 aa21.08■□□□□ 0.97
DDX46-211ENST00000513987 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
DDX46-211ENST00000513987 ADRA2BP18089 450 aa20.71■□□□□ 0.91
DDX46-211ENST00000513987 PIAS4Q8N2W9 510 aaPredicted RBP19.97■□□□□ 0.79
DDX46-211ENST00000513987 KCNA4P22459 653 aa19.71■□□□□ 0.75
DDX46-211ENST00000513987 PPP4R3CPQ6ZMV5 832 aa19.5■□□□□ 0.71
DDX46-211ENST00000513987 MSH5O43196 834 aa19.18■□□□□ 0.66
DDX46-211ENST00000513987 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
DDX46-211ENST00000513987 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
DDX46-211ENST00000513987 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
DDX46-211ENST00000513987 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
DDX46-211ENST00000513987 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
DDX46-211ENST00000513987 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
DDX46-211ENST00000513987 MAPK8IP2Q13387 824 aaPredicted RBP18.63■□□□□ 0.57
DDX46-211ENST00000513987 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
DDX46-211ENST00000513987 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
DDX46-211ENST00000513987 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
DDX46-211ENST00000513987 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
DDX46-211ENST00000513987 ZBTB22O15209 634 aa18.2■□□□□ 0.5
DDX46-211ENST00000513987 HOXD11P31277 338 aaPredicted RBP18.15■□□□□ 0.5
DDX46-211ENST00000513987 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
DDX46-211ENST00000513987 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
DDX46-211ENST00000513987 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
DDX46-211ENST00000513987 NISCHQ9Y2I1 1504 aa17.38■□□□□ 0.37
DDX46-211ENST00000513987 DCAF8L1A6NGE4 600 aa17.34■□□□□ 0.37
DDX46-211ENST00000513987 ATXN8OSP0DMR3 200 aa17.28■□□□□ 0.36
DDX46-211ENST00000513987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.342e-7■■□□□ 14
DDX46-211ENST00000513987 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
DDX46-211ENST00000513987 ATF5Q9Y2D1 282 aaPredicted RBP16.96■□□□□ 0.31
DDX46-211ENST00000513987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
DDX46-211ENST00000513987 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
DDX46-211ENST00000513987 SAMD1Q6SPF0 538 aaPredicted RBP16.94■□□□□ 0.3
DDX46-211ENST00000513987 FKBP8Q14318 412 aa16.63■□□□□ 0.25
DDX46-211ENST00000513987 APLP2Q06481 763 aa16.62■□□□□ 0.25
DDX46-211ENST00000513987 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
DDX46-211ENST00000513987 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
DDX46-211ENST00000513987 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
DDX46-211ENST00000513987 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
DDX46-211ENST00000513987 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
DDX46-211ENST00000513987 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
DDX46-211ENST00000513987 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
DDX46-211ENST00000513987 CAPN15O75808 1086 aa16.23■□□□□ 0.19
DDX46-211ENST00000513987 POLA2Q14181 598 aa16.19■□□□□ 0.18
DDX46-211ENST00000513987 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
DDX46-211ENST00000513987 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
DDX46-211ENST00000513987 FBLN2P98095 1184 aa16.11■□□□□ 0.17
DDX46-211ENST00000513987 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
DDX46-211ENST00000513987 ABCC9O60706 1549 aa16.04■□□□□ 0.16
DDX46-211ENST00000513987 ABCB7O75027 752 aa16.02■□□□□ 0.16
DDX46-211ENST00000513987 PROM2Q8N271 834 aa16.02■□□□□ 0.16
DDX46-211ENST00000513987 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
DDX46-211ENST00000513987 DSG3P32926 999 aa15.91■□□□□ 0.14
DDX46-211ENST00000513987 FBXO3Q9UK99 471 aa15.86■□□□□ 0.13
DDX46-211ENST00000513987 VASPP50552 380 aaPredicted RBP15.69■□□□□ 0.1
DDX46-211ENST00000513987 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
DDX46-211ENST00000513987 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
DDX46-211ENST00000513987 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
DDX46-211ENST00000513987 SPDYE2BA6NHP3 402 aa15.6■□□□□ 0.09
DDX46-211ENST00000513987 SPDYE6P0CI01 402 aa15.6■□□□□ 0.09
DDX46-211ENST00000513987 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
DDX46-211ENST00000513987 SSUH2Q9Y2M2 353 aa15.6■□□□□ 0.09
DDX46-211ENST00000513987 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
DDX46-211ENST00000513987 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
DDX46-211ENST00000513987 SLC24A1O60721 1099 aa15.47■□□□□ 0.07
DDX46-211ENST00000513987 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
DDX46-211ENST00000513987 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
DDX46-211ENST00000513987 PKD2Q13563 968 aa15.24■□□□□ 0.03
DDX46-211ENST00000513987 SPOCK2Q92563 424 aa15.21■□□□□ 0.03
DDX46-211ENST00000513987 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
DDX46-211ENST00000513987 PLCD3Q8N3E9 789 aa15.19■□□□□ 0.02
DDX46-211ENST00000513987 MIER1Q8N108 512 aa15.14■□□□□ 0.01
DDX46-211ENST00000513987 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
DDX46-211ENST00000513987 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
DDX46-211ENST00000513987 AKT1S1Q96B36 256 aa15.05■□□□□ -0
DDX46-211ENST00000513987 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
DDX46-211ENST00000513987 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
DDX46-211ENST00000513987 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
DDX46-211ENST00000513987 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
DDX46-211ENST00000513987 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
DDX46-211ENST00000513987 PLCB2Q00722 1185 aa14.94□□□□□ -0.02
DDX46-211ENST00000513987 NACADO15069 1562 aa14.92□□□□□ -0.02
DDX46-211ENST00000513987 REM2Q8IYK8 340 aaPredicted RBP14.91□□□□□ -0.02
DDX46-211ENST00000513987 RGL2O15211 777 aa14.86□□□□□ -0.03
DDX46-211ENST00000513987 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
DDX46-211ENST00000513987 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
DDX46-211ENST00000513987 CIZ1Q9ULV3 898 aaPredicted RBP14.83□□□□□ -0.04
DDX46-211ENST00000513987 PRR29P0C7W0 189 aa14.81□□□□□ -0.04
DDX46-211ENST00000513987 NUBP1P53384 320 aa14.8□□□□□ -0.04
DDX46-211ENST00000513987 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDX46-211ENST00000513987 MNX1P50219 401 aaPredicted RBP14.78□□□□□ -0.04
DDX46-211ENST00000513987 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
DDX46-211ENST00000513987 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
DDX46-211ENST00000513987 BBXQ8WY36 941 aaPredicted RBP14.73□□□□□ -0.05
DDX46-211ENST00000513987 GSE1Q14687 1217 aa14.72□□□□□ -0.05
DDX46-211ENST00000513987 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms